RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 SPHKAPQ2M3C7 1700 aa16.54■□□□□ 0.24
APOBEC3B-201ENST00000333467 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.23
APOBEC3B-201ENST00000333467 XIRP1Q702N8 1843 aaKnown RBP16.48■□□□□ 0.23
APOBEC3B-201ENST00000333467 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
APOBEC3B-201ENST00000333467 IDI1Q13907 227 aa16.46■□□□□ 0.23
APOBEC3B-201ENST00000333467 NAIPQ13075 1403 aa16.46■□□□□ 0.23
APOBEC3B-201ENST00000333467 LTKP29376 864 aa16.45■□□□□ 0.22
APOBEC3B-201ENST00000333467 STAG3Q9UJ98 1225 aa16.45■□□□□ 0.22
APOBEC3B-201ENST00000333467 NUP155O75694 1391 aa16.45■□□□□ 0.22
APOBEC3B-201ENST00000333467 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
APOBEC3B-201ENST00000333467 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
APOBEC3B-201ENST00000333467 HFM1A2PYH4 1435 aa16.43■□□□□ 0.22
APOBEC3B-201ENST00000333467 ZFYVE9O95405 1425 aa16.42■□□□□ 0.22
APOBEC3B-201ENST00000333467 LRRC7Q96NW7 1537 aa16.42■□□□□ 0.22
APOBEC3B-201ENST00000333467 ALKQ9UM73 1620 aa16.42■□□□□ 0.22
APOBEC3B-201ENST00000333467 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
APOBEC3B-201ENST00000333467 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
APOBEC3B-201ENST00000333467 CLTCL1P53675 1640 aa16.41■□□□□ 0.22
APOBEC3B-201ENST00000333467 KIF1BO60333 1816 aa16.4■□□□□ 0.22
APOBEC3B-201ENST00000333467 TRPM2O94759 1503 aa16.39■□□□□ 0.21
APOBEC3B-201ENST00000333467 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
APOBEC3B-201ENST00000333467 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
APOBEC3B-201ENST00000333467 RIMS2Q9UQ26 1411 aa16.38■□□□□ 0.21
APOBEC3B-201ENST00000333467 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3B-201ENST00000333467 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
APOBEC3B-201ENST00000333467 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
APOBEC3B-201ENST00000333467 NKTRP30414 1462 aaKnown RBP16.34■□□□□ 0.21
APOBEC3B-201ENST00000333467 PLEKHG1Q9ULL1 1385 aa16.33■□□□□ 0.21
APOBEC3B-201ENST00000333467 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
APOBEC3B-201ENST00000333467 SLC26A8Q96RN1 970 aa16.31■□□□□ 0.2
APOBEC3B-201ENST00000333467 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
APOBEC3B-201ENST00000333467 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
APOBEC3B-201ENST00000333467 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
APOBEC3B-201ENST00000333467 TOM1O60784 492 aa16.29■□□□□ 0.2
APOBEC3B-201ENST00000333467 PPLO60437 1756 aa16.28■□□□□ 0.2
APOBEC3B-201ENST00000333467 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
APOBEC3B-201ENST00000333467 ADAMTS13Q76LX8 1427 aa16.28■□□□□ 0.2
APOBEC3B-201ENST00000333467 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.2
APOBEC3B-201ENST00000333467 BCANQ96GW7 911 aa16.27■□□□□ 0.2
APOBEC3B-201ENST00000333467 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
APOBEC3B-201ENST00000333467 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
APOBEC3B-201ENST00000333467 TMEM94Q12767 1356 aa16.26■□□□□ 0.19
APOBEC3B-201ENST00000333467 NUTM2DQ5VT03 806 aaPredicted RBP16.25■□□□□ 0.19
APOBEC3B-201ENST00000333467 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.25■□□□□ 0.19
APOBEC3B-201ENST00000333467 IFT172Q9UG01 1749 aa16.25■□□□□ 0.19
APOBEC3B-201ENST00000333467 KCNA6P17658 529 aa16.24■□□□□ 0.19
APOBEC3B-201ENST00000333467 HDGFP51858 240 aaKnown RBP16.24■□□□□ 0.19
APOBEC3B-201ENST00000333467 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
APOBEC3B-201ENST00000333467 RNF216Q9NWF9 866 aaPredicted RBP16.23■□□□□ 0.19
APOBEC3B-201ENST00000333467 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
APOBEC3B-201ENST00000333467 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3B-201ENST00000333467 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3B-201ENST00000333467 HSPA1LP34931 641 aa16.2■□□□□ 0.18
APOBEC3B-201ENST00000333467 ZNF326Q5BKZ1 582 aaKnown RBP16.2■□□□□ 0.18
APOBEC3B-201ENST00000333467 PIK3R4Q99570 1358 aa16.2■□□□□ 0.18
APOBEC3B-201ENST00000333467 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
APOBEC3B-201ENST00000333467 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
APOBEC3B-201ENST00000333467 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
APOBEC3B-201ENST00000333467 TBX22Q9Y458 520 aa16.19■□□□□ 0.18
APOBEC3B-201ENST00000333467 PTPRUQ92729 1446 aa16.18■□□□□ 0.18
APOBEC3B-201ENST00000333467 NALCNQ8IZF0 1738 aa16.18■□□□□ 0.18
APOBEC3B-201ENST00000333467 PROSER2Q86WR7 435 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3B-201ENST00000333467 SETD5Q9C0A6 1442 aa16.17■□□□□ 0.18
APOBEC3B-201ENST00000333467 MSH6P52701 1360 aa16.17■□□□□ 0.18
APOBEC3B-201ENST00000333467 PHLPP1O60346 1717 aa16.15■□□□□ 0.18
APOBEC3B-201ENST00000333467 CCDC144AA2RUR9 1427 aa16.15■□□□□ 0.18
APOBEC3B-201ENST00000333467 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
APOBEC3B-201ENST00000333467 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
APOBEC3B-201ENST00000333467 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
APOBEC3B-201ENST00000333467 NCOA3Q9Y6Q9 1424 aa16.13■□□□□ 0.17
APOBEC3B-201ENST00000333467 FAM135BQ49AJ0 1406 aa16.12■□□□□ 0.17
APOBEC3B-201ENST00000333467 MPHOSPH9Q99550 1183 aa16.12■□□□□ 0.17
APOBEC3B-201ENST00000333467 METP08581 1390 aa16.12■□□□□ 0.17
APOBEC3B-201ENST00000333467 SPATA31E1Q6ZUB1 1445 aa16.11■□□□□ 0.17
APOBEC3B-201ENST00000333467 COL16A1Q07092 1604 aaPredicted RBP16.1■□□□□ 0.17
APOBEC3B-201ENST00000333467 AMOTL2Q9Y2J4 779 aa16.09■□□□□ 0.17
APOBEC3B-201ENST00000333467 KNDC1Q76NI1 1749 aa16.09■□□□□ 0.17
APOBEC3B-201ENST00000333467 C14orf37Q86TY3 774 aa16.08■□□□□ 0.16
APOBEC3B-201ENST00000333467 DCCP43146 1447 aa16.08■□□□□ 0.16
APOBEC3B-201ENST00000333467 PTCH1Q13635 1447 aa16.07■□□□□ 0.16
APOBEC3B-201ENST00000333467 RPGRIP1LQ68CZ1 1315 aa16.07■□□□□ 0.16
APOBEC3B-201ENST00000333467 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
APOBEC3B-201ENST00000333467 LAMC1P11047 1609 aa16.07■□□□□ 0.16
APOBEC3B-201ENST00000333467 ASXL1Q8IXJ9 1541 aa16.06■□□□□ 0.16
APOBEC3B-201ENST00000333467 PRAG1Q86YV5 1406 aa16.06■□□□□ 0.16
APOBEC3B-201ENST00000333467 NHSL1Q5SYE7 1610 aa16.06■□□□□ 0.16
APOBEC3B-201ENST00000333467 AHDC1Q5TGY3 1603 aaPredicted RBP16.06■□□□□ 0.16
APOBEC3B-201ENST00000333467 ADGRL3Q9HAR2 1447 aa16.05■□□□□ 0.16
APOBEC3B-201ENST00000333467 DIEXFQ68CQ4 756 aaKnown RBP16.05■□□□□ 0.16
APOBEC3B-201ENST00000333467 VGFO15240 615 aaPredicted RBP16.04■□□□□ 0.16
APOBEC3B-201ENST00000333467 ILDR2Q71H61 639 aa16.04■□□□□ 0.16
APOBEC3B-201ENST00000333467 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
APOBEC3B-201ENST00000333467 SLAIN2Q9P270 581 aa16.03■□□□□ 0.16
APOBEC3B-201ENST00000333467 PIK3C2GO75747 1445 aa16.02■□□□□ 0.16
APOBEC3B-201ENST00000333467 MYOM2P54296 1465 aa16.02■□□□□ 0.16
APOBEC3B-201ENST00000333467 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.15
APOBEC3B-201ENST00000333467 CADPS2Q86UW7 1296 aa16.02■□□□□ 0.15
APOBEC3B-201ENST00000333467 ANKRD30BQ9BXX2 1392 aa16.02■□□□□ 0.15
APOBEC3B-201ENST00000333467 MST1RQ04912 1400 aa16.02■□□□□ 0.15
APOBEC3B-201ENST00000333467 C19orf44Q9H6X5 657 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms