RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 NPHP4O75161 1426 aaPredicted RBP30.08■■■□□ 2.41
MRPL40-201ENST00000333130 RIMS2Q9UQ26 1411 aa30.08■■■□□ 2.41
MRPL40-201ENST00000333130 ZNF326Q5BKZ1 582 aaKnown RBP30.07■■■□□ 2.4
MRPL40-201ENST00000333130 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.07■■■□□ 2.4
MRPL40-201ENST00000333130 PPP1R15AO75807 674 aaPredicted RBP30.06■■■□□ 2.4
MRPL40-201ENST00000333130 ANKRD30BQ9BXX2 1392 aa30.04■■■□□ 2.4
MRPL40-201ENST00000333130 ZFYVE9O95405 1425 aa30.04■■■□□ 2.4
MRPL40-201ENST00000333130 LTKP29376 864 aa30.03■■■□□ 2.4
MRPL40-201ENST00000333130 BCANQ96GW7 911 aa29.96■■■□□ 2.39
MRPL40-201ENST00000333130 NEXMIFQ5QGS0 1516 aa29.96■■■□□ 2.39
MRPL40-201ENST00000333130 RPGRIP1LQ68CZ1 1315 aa29.95■■■□□ 2.39
MRPL40-201ENST00000333130 PLEKHG1Q9ULL1 1385 aa29.95■■■□□ 2.38
MRPL40-201ENST00000333130 PPLO60437 1756 aa29.94■■■□□ 2.38
MRPL40-201ENST00000333130 SPATA31E1Q6ZUB1 1445 aa29.92■■■□□ 2.38
MRPL40-201ENST00000333130 NUTM2DQ5VT03 806 aaPredicted RBP29.9■■■□□ 2.38
MRPL40-201ENST00000333130 DIP2AQ14689 1571 aa29.88■■■□□ 2.37
MRPL40-201ENST00000333130 IFT172Q9UG01 1749 aa29.88■■■□□ 2.37
MRPL40-201ENST00000333130 VGFO15240 615 aaPredicted RBP29.88■■■□□ 2.37
MRPL40-201ENST00000333130 RGL3Q3MIN7 710 aa29.88■■■□□ 2.37
MRPL40-201ENST00000333130 SETBP1Q9Y6X0 1596 aa29.83■■■□□ 2.37
MRPL40-201ENST00000333130 ZNF335Q9H4Z2 1342 aaPredicted RBP29.83■■■□□ 2.37
MRPL40-201ENST00000333130 SLC26A8Q96RN1 970 aa29.81■■■□□ 2.36
MRPL40-201ENST00000333130 SENP3Q9H4L4 574 aaPredicted RBP29.8■■■□□ 2.36
MRPL40-201ENST00000333130 CPS1P31327 1500 aa29.8■■■□□ 2.36
MRPL40-201ENST00000333130 LTBP4Q8N2S1 1624 aa29.79■■■□□ 2.36
MRPL40-201ENST00000333130 NRXN3Q9Y4C0 1643 aa29.78■■■□□ 2.36
MRPL40-201ENST00000333130 CLSPNQ9HAW4 1339 aa29.77■■■□□ 2.36
MRPL40-201ENST00000333130 TBX22Q9Y458 520 aa29.77■■■□□ 2.36
MRPL40-201ENST00000333130 ADAMTS13Q76LX8 1427 aa29.75■■■□□ 2.35
MRPL40-201ENST00000333130 MYOM2P54296 1465 aa29.75■■■□□ 2.35
MRPL40-201ENST00000333130 CHD2O14647 1828 aaKnown RBP29.74■■■□□ 2.35
MRPL40-201ENST00000333130 PIK3R4Q99570 1358 aa29.72■■■□□ 2.35
MRPL40-201ENST00000333130 STRCP1A6NGW2 1772 aa29.72■■■□□ 2.35
MRPL40-201ENST00000333130 NWD1Q149M9 1564 aa29.71■■■□□ 2.35
MRPL40-201ENST00000333130 STAC3Q96MF2 364 aa29.71■■■□□ 2.35
MRPL40-201ENST00000333130 SIN3AQ96ST3 1273 aa29.7■■■□□ 2.35
MRPL40-201ENST00000333130 CERKQ8TCT0 537 aa29.69■■■□□ 2.34
MRPL40-201ENST00000333130 LAMC1P11047 1609 aa29.68■■■□□ 2.34
MRPL40-201ENST00000333130 KCNA6P17658 529 aa29.68■■■□□ 2.34
MRPL40-201ENST00000333130 NKTRP30414 1462 aaKnown RBP29.68■■■□□ 2.34
MRPL40-201ENST00000333130 IQSEC2Q5JU85 1478 aa29.68■■■□□ 2.34
MRPL40-201ENST00000333130 ALKQ9UM73 1620 aa29.68■■■□□ 2.34
MRPL40-201ENST00000333130 ADGRF5Q8IZF2 1346 aa29.67■■■□□ 2.34
MRPL40-201ENST00000333130 DCAF11Q8TEB1 546 aa29.66■■■□□ 2.34
MRPL40-201ENST00000333130 SETD1AO15047 1707 aaKnown RBP29.66■■■□□ 2.34
MRPL40-201ENST00000333130 PIK3C2GO75747 1445 aa29.66■■■□□ 2.34
MRPL40-201ENST00000333130 CCER1Q8TC90 406 aaPredicted RBP29.65■■■□□ 2.34
MRPL40-201ENST00000333130 NRXN1Q9ULB1 1477 aa29.64■■■□□ 2.34
MRPL40-201ENST00000333130 NEUROD1Q13562 356 aa29.64■■■□□ 2.33
MRPL40-201ENST00000333130 KDM2AQ9Y2K7 1162 aa29.62■■■□□ 2.33
MRPL40-201ENST00000333130 XRN1Q8IZH2 1706 aaKnown RBP29.59■■■□□ 2.33
MRPL40-201ENST00000333130 LRRC7Q96NW7 1537 aa29.59■■■□□ 2.33
MRPL40-201ENST00000333130 METP08581 1390 aa29.58■■■□□ 2.33
MRPL40-201ENST00000333130 AMOTL2Q9Y2J4 779 aa29.56■■■□□ 2.32
MRPL40-201ENST00000333130 PROSER2Q86WR7 435 aaPredicted RBP29.55■■■□□ 2.32
MRPL40-201ENST00000333130 TONSLQ96HA7 1378 aa29.54■■■□□ 2.32
MRPL40-201ENST00000333130 PTPRUQ92729 1446 aa29.54■■■□□ 2.32
MRPL40-201ENST00000333130 XIRP1Q702N8 1843 aaKnown RBP29.53■■■□□ 2.32
MRPL40-201ENST00000333130 L3MBTL2Q969R5 705 aa29.51■■■□□ 2.31
MRPL40-201ENST00000333130 C14orf93Q9H972 538 aaKnown RBP29.51■■■□□ 2.31
MRPL40-201ENST00000333130 TMEM94Q12767 1356 aa29.5■■■□□ 2.31
MRPL40-201ENST00000333130 KIAA1210Q9ULL0 1709 aa29.49■■■□□ 2.31
MRPL40-201ENST00000333130 KNDC1Q76NI1 1749 aa29.48■■■□□ 2.31
MRPL40-201ENST00000333130 PTCH1Q13635 1447 aa29.48■■■□□ 2.31
MRPL40-201ENST00000333130 NCOA3Q9Y6Q9 1424 aa29.47■■■□□ 2.31
MRPL40-201ENST00000333130 CFAP70Q5T0N1 1121 aa29.47■■■□□ 2.31
MRPL40-201ENST00000333130 PRAG1Q86YV5 1406 aa29.46■■■□□ 2.31
MRPL40-201ENST00000333130 ASXL1Q8IXJ9 1541 aa29.46■■■□□ 2.31
MRPL40-201ENST00000333130 C14orf37Q86TY3 774 aa29.45■■■□□ 2.31
MRPL40-201ENST00000333130 LRPPRCP42704 1394 aaKnown RBP29.44■■■□□ 2.3
MRPL40-201ENST00000333130 MSH6P52701 1360 aa29.43■■■□□ 2.3
MRPL40-201ENST00000333130 FBXO41Q8TF61 875 aa29.43■■■□□ 2.3
MRPL40-201ENST00000333130 TIMELESSQ9UNS1 1208 aa29.43■■■□□ 2.3
MRPL40-201ENST00000333130 YTHDC2Q9H6S0 1430 aaKnown RBP29.43■■■□□ 2.3
MRPL40-201ENST00000333130 TMEM132EQ6IEE7 984 aa29.41■■■□□ 2.3
MRPL40-201ENST00000333130 UBAP1LF5GYI3 381 aa29.4■■■□□ 2.3
MRPL40-201ENST00000333130 TOM1O60784 492 aa29.4■■■□□ 2.3
MRPL40-201ENST00000333130 TECPR2O15040 1411 aa29.4■■■□□ 2.3
MRPL40-201ENST00000333130 STK26Q9P289 416 aa29.39■■■□□ 2.3
MRPL40-201ENST00000333130 ABCC11Q96J66 1382 aa29.39■■■□□ 2.3
MRPL40-201ENST00000333130 ADGRB1O14514 1584 aa29.39■■■□□ 2.3
MRPL40-201ENST00000333130 TRPM1Q7Z4N2 1603 aa29.39■■■□□ 2.29
MRPL40-201ENST00000333130 RBM33Q96EV2 1170 aaKnown RBP29.39■■■□□ 2.29
MRPL40-201ENST00000333130 ROBO2Q9HCK4 1378 aa29.36■■■□□ 2.29
MRPL40-201ENST00000333130 NALCNQ8IZF0 1738 aa29.34■■■□□ 2.29
MRPL40-201ENST00000333130 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.34■■■□□ 2.29
MRPL40-201ENST00000333130 C19orf44Q9H6X5 657 aa29.33■■■□□ 2.29
MRPL40-201ENST00000333130 ADGRL3Q9HAR2 1447 aa29.33■■■□□ 2.29
MRPL40-201ENST00000333130 DLC1Q96QB1 1528 aa29.33■■■□□ 2.29
MRPL40-201ENST00000333130 DCCP43146 1447 aa29.32■■■□□ 2.28
MRPL40-201ENST00000333130 FAM135BQ49AJ0 1406 aa29.32■■■□□ 2.28
MRPL40-201ENST00000333130 ATF3P18847 181 aa29.3■■■□□ 2.28
MRPL40-201ENST00000333130 SIRT1Q96EB6 747 aa29.29■■■□□ 2.28
MRPL40-201ENST00000333130 SCAF1Q9H7N4 1312 aaKnown RBP29.28■■■□□ 2.28
MRPL40-201ENST00000333130 CADPS2Q86UW7 1296 aa29.28■■■□□ 2.28
MRPL40-201ENST00000333130 ARHGEF28Q8N1W1 1705 aaKnown RBP29.27■■■□□ 2.28
MRPL40-201ENST00000333130 NBPF8Q3BBV2 869 aa29.26■■■□□ 2.28
MRPL40-201ENST00000333130 RALGAPBQ86X10 1494 aa29.26■■■□□ 2.28
MRPL40-201ENST00000333130 ROCK2O75116 1388 aaKnown RBP29.26■■■□□ 2.27
MRPL40-201ENST00000333130 POGKQ9P215 609 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms