RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 PPLO60437 1756 aa30.82■■■□□ 2.52
YBX1-202ENST00000332220 NPHP4O75161 1426 aaPredicted RBP30.81■■■□□ 2.52
YBX1-202ENST00000332220 DMRT2Q9Y5R5 561 aa30.81■■■□□ 2.52
YBX1-202ENST00000332220 NEXMIFQ5QGS0 1516 aa30.8■■■□□ 2.52
YBX1-202ENST00000332220 IFT172Q9UG01 1749 aa30.79■■■□□ 2.52
YBX1-202ENST00000332220 EID1Q9Y6B2 187 aa30.79■■■□□ 2.52
YBX1-202ENST00000332220 DHX57Q6P158 1386 aaKnown RBP30.77■■■□□ 2.52
YBX1-202ENST00000332220 SPATA31E1Q6ZUB1 1445 aa30.76■■■□□ 2.51
YBX1-202ENST00000332220 ZNF326Q5BKZ1 582 aaKnown RBP30.75■■■□□ 2.51
YBX1-202ENST00000332220 NUTM2DQ5VT03 806 aaPredicted RBP30.73■■■□□ 2.51
YBX1-202ENST00000332220 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.69■■■□□ 2.5
YBX1-202ENST00000332220 NRXN3Q9Y4C0 1643 aa30.69■■■□□ 2.5
YBX1-202ENST00000332220 PLEKHG1Q9ULL1 1385 aa30.68■■■□□ 2.5
YBX1-202ENST00000332220 PPP1R15AO75807 674 aaPredicted RBP30.68■■■□□ 2.5
YBX1-202ENST00000332220 STRCP1A6NGW2 1772 aa30.67■■■□□ 2.5
YBX1-202ENST00000332220 HDGFP51858 240 aaKnown RBP30.67■■■□□ 2.5
YBX1-202ENST00000332220 SENP3Q9H4L4 574 aaPredicted RBP30.67■■■□□ 2.5
YBX1-202ENST00000332220 RGL3Q3MIN7 710 aa30.65■■■□□ 2.5
YBX1-202ENST00000332220 RPGRIP1LQ68CZ1 1315 aa30.62■■■□□ 2.49
YBX1-202ENST00000332220 SETBP1Q9Y6X0 1596 aa30.62■■■□□ 2.49
YBX1-202ENST00000332220 LTBP4Q8N2S1 1624 aa30.62■■■□□ 2.49
YBX1-202ENST00000332220 ZNF335Q9H4Z2 1342 aaPredicted RBP30.61■■■□□ 2.49
YBX1-202ENST00000332220 CHD2O14647 1828 aaKnown RBP30.59■■■□□ 2.49
YBX1-202ENST00000332220 SETD1AO15047 1707 aaKnown RBP30.59■■■□□ 2.49
YBX1-202ENST00000332220 ADAMTS13Q76LX8 1427 aa30.59■■■□□ 2.49
YBX1-202ENST00000332220 SLC26A8Q96RN1 970 aa30.59■■■□□ 2.49
YBX1-202ENST00000332220 DIP2AQ14689 1571 aa30.58■■■□□ 2.49
YBX1-202ENST00000332220 BCANQ96GW7 911 aa30.58■■■□□ 2.49
YBX1-202ENST00000332220 VGFO15240 615 aaPredicted RBP30.53■■■□□ 2.48
YBX1-202ENST00000332220 SIN3AQ96ST3 1273 aa30.53■■■□□ 2.48
YBX1-202ENST00000332220 MYOM2P54296 1465 aa30.5■■■□□ 2.47
YBX1-202ENST00000332220 ADGRF5Q8IZF2 1346 aa30.5■■■□□ 2.47
YBX1-202ENST00000332220 NWD1Q149M9 1564 aa30.49■■■□□ 2.47
YBX1-202ENST00000332220 ALKQ9UM73 1620 aa30.49■■■□□ 2.47
YBX1-202ENST00000332220 TBX22Q9Y458 520 aa30.49■■■□□ 2.47
YBX1-202ENST00000332220 XIRP1Q702N8 1843 aaKnown RBP30.48■■■□□ 2.47
YBX1-202ENST00000332220 NRXN1Q9ULB1 1477 aa30.46■■■□□ 2.47
YBX1-202ENST00000332220 CPS1P31327 1500 aa30.46■■■□□ 2.47
YBX1-202ENST00000332220 PIK3C2GO75747 1445 aa30.44■■■□□ 2.46
YBX1-202ENST00000332220 NEUROD1Q13562 356 aa30.43■■■□□ 2.46
YBX1-202ENST00000332220 XRN1Q8IZH2 1706 aaKnown RBP30.42■■■□□ 2.46
YBX1-202ENST00000332220 DCAF11Q8TEB1 546 aa30.42■■■□□ 2.46
YBX1-202ENST00000332220 LAMC1P11047 1609 aa30.41■■■□□ 2.46
YBX1-202ENST00000332220 METP08581 1390 aa30.41■■■□□ 2.46
YBX1-202ENST00000332220 PTPRUQ92729 1446 aa30.4■■■□□ 2.46
YBX1-202ENST00000332220 PIK3R4Q99570 1358 aa30.4■■■□□ 2.46
YBX1-202ENST00000332220 KCNA6P17658 529 aa30.39■■■□□ 2.46
YBX1-202ENST00000332220 KDM2AQ9Y2K7 1162 aa30.39■■■□□ 2.46
YBX1-202ENST00000332220 CERKQ8TCT0 537 aa30.38■■■□□ 2.45
YBX1-202ENST00000332220 ASXL1Q8IXJ9 1541 aa30.37■■■□□ 2.45
YBX1-202ENST00000332220 LRRC7Q96NW7 1537 aa30.37■■■□□ 2.45
YBX1-202ENST00000332220 NKTRP30414 1462 aaKnown RBP30.36■■■□□ 2.45
YBX1-202ENST00000332220 L3MBTL2Q969R5 705 aa30.33■■■□□ 2.45
YBX1-202ENST00000332220 IQSEC2Q5JU85 1478 aa30.31■■■□□ 2.44
YBX1-202ENST00000332220 KIAA1210Q9ULL0 1709 aa30.3■■■□□ 2.44
YBX1-202ENST00000332220 STAC3Q96MF2 364 aa30.3■■■□□ 2.44
YBX1-202ENST00000332220 AMOTL2Q9Y2J4 779 aa30.29■■■□□ 2.44
YBX1-202ENST00000332220 KNDC1Q76NI1 1749 aa30.29■■■□□ 2.44
YBX1-202ENST00000332220 CFAP70Q5T0N1 1121 aa30.28■■■□□ 2.44
YBX1-202ENST00000332220 C14orf93Q9H972 538 aaKnown RBP30.28■■■□□ 2.44
YBX1-202ENST00000332220 PRAG1Q86YV5 1406 aa30.26■■■□□ 2.43
YBX1-202ENST00000332220 CLSPNQ9HAW4 1339 aa30.25■■■□□ 2.43
YBX1-202ENST00000332220 PROSER2Q86WR7 435 aaPredicted RBP30.24■■■□□ 2.43
YBX1-202ENST00000332220 CCER1Q8TC90 406 aaPredicted RBP30.24■■■□□ 2.43
YBX1-202ENST00000332220 RBM33Q96EV2 1170 aaKnown RBP30.24■■■□□ 2.43
YBX1-202ENST00000332220 TMEM94Q12767 1356 aa30.24■■■□□ 2.43
YBX1-202ENST00000332220 ADGRB1O14514 1584 aa30.24■■■□□ 2.43
YBX1-202ENST00000332220 TMEM132EQ6IEE7 984 aa30.23■■■□□ 2.43
YBX1-202ENST00000332220 TONSLQ96HA7 1378 aa30.23■■■□□ 2.43
YBX1-202ENST00000332220 TRPM1Q7Z4N2 1603 aa30.22■■■□□ 2.43
YBX1-202ENST00000332220 YTHDC2Q9H6S0 1430 aaKnown RBP30.19■■■□□ 2.42
YBX1-202ENST00000332220 NALCNQ8IZF0 1738 aa30.19■■■□□ 2.42
YBX1-202ENST00000332220 LRPPRCP42704 1394 aaKnown RBP30.18■■■□□ 2.42
YBX1-202ENST00000332220 PTCH1Q13635 1447 aa30.18■■■□□ 2.42
YBX1-202ENST00000332220 ROBO2Q9HCK4 1378 aa30.16■■■□□ 2.42
YBX1-202ENST00000332220 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.16■■■□□ 2.42
YBX1-202ENST00000332220 TECPR2O15040 1411 aa30.16■■■□□ 2.42
YBX1-202ENST00000332220 STK26Q9P289 416 aa30.15■■■□□ 2.42
YBX1-202ENST00000332220 ABCC11Q96J66 1382 aa30.13■■■□□ 2.41
YBX1-202ENST00000332220 ARHGEF28Q8N1W1 1705 aaKnown RBP30.13■■■□□ 2.41
YBX1-202ENST00000332220 NCOA3Q9Y6Q9 1424 aa30.11■■■□□ 2.41
YBX1-202ENST00000332220 NBPF8Q3BBV2 869 aa30.09■■■□□ 2.41
YBX1-202ENST00000332220 DLC1Q96QB1 1528 aa30.08■■■□□ 2.41
YBX1-202ENST00000332220 NBPF1Q3BBV0 1214 aa30.08■■■□□ 2.41
YBX1-202ENST00000332220 MSH6P52701 1360 aa30.05■■■□□ 2.4
YBX1-202ENST00000332220 UBAP1LF5GYI3 381 aa30.05■■■□□ 2.4
YBX1-202ENST00000332220 ADGRL3Q9HAR2 1447 aa30.05■■■□□ 2.4
YBX1-202ENST00000332220 PLEKHH1Q9ULM0 1364 aa30.04■■■□□ 2.4
YBX1-202ENST00000332220 C14orf37Q86TY3 774 aa30.04■■■□□ 2.4
YBX1-202ENST00000332220 FBXO41Q8TF61 875 aa30.04■■■□□ 2.4
YBX1-202ENST00000332220 FAM135BQ49AJ0 1406 aa30.04■■■□□ 2.4
YBX1-202ENST00000332220 WAPLQ7Z5K2 1190 aa30.03■■■□□ 2.4
YBX1-202ENST00000332220 TRAK1Q9UPV9 953 aa30.02■■■□□ 2.4
YBX1-202ENST00000332220 RALGAPBQ86X10 1494 aa29.99■■■□□ 2.39
YBX1-202ENST00000332220 TOM1O60784 492 aa29.99■■■□□ 2.39
YBX1-202ENST00000332220 SIRT1Q96EB6 747 aa29.99■■■□□ 2.39
YBX1-202ENST00000332220 C19orf44Q9H6X5 657 aa29.99■■■□□ 2.39
YBX1-202ENST00000332220 TIMELESSQ9UNS1 1208 aa29.98■■■□□ 2.39
YBX1-202ENST00000332220 DCCP43146 1447 aa29.97■■■□□ 2.39
YBX1-202ENST00000332220 ROCK2O75116 1388 aaKnown RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms