RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 NRXN1Q9ULB1 1477 aa14.64□□□□□ -0.07
VIPAS39-201ENST00000327028 KDM2AQ9Y2K7 1162 aa14.63□□□□□ -0.07
VIPAS39-201ENST00000327028 ZNF142P52746 1687 aaPredicted RBP14.63□□□□□ -0.07
VIPAS39-201ENST00000327028 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
VIPAS39-201ENST00000327028 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
VIPAS39-201ENST00000327028 KIAA1210Q9ULL0 1709 aa14.61□□□□□ -0.07
VIPAS39-201ENST00000327028 CEP170BQ9Y4F5 1589 aaPredicted RBP14.61□□□□□ -0.07
VIPAS39-201ENST00000327028 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
VIPAS39-201ENST00000327028 SETD1BQ9UPS6 1966 aaKnown RBP14.6□□□□□ -0.07
VIPAS39-201ENST00000327028 PIK3C2GO75747 1445 aa14.58□□□□□ -0.07
VIPAS39-201ENST00000327028 RIMS2Q9UQ26 1411 aa14.58□□□□□ -0.07
VIPAS39-201ENST00000327028 LAMC1P11047 1609 aa14.58□□□□□ -0.07
VIPAS39-201ENST00000327028 ADGRF5Q8IZF2 1346 aa14.57□□□□□ -0.08
VIPAS39-201ENST00000327028 SLIT1O75093 1534 aa14.57□□□□□ -0.08
VIPAS39-201ENST00000327028 KDM4FA0A1W2PPD8 638 aa14.56□□□□□ -0.08
VIPAS39-201ENST00000327028 GPRASP1Q5JY77 1395 aa14.56□□□□□ -0.08
VIPAS39-201ENST00000327028 TMEM2Q9UHN6 1383 aa14.56□□□□□ -0.08
VIPAS39-201ENST00000327028 VGFO15240 615 aaPredicted RBP14.56□□□□□ -0.08
VIPAS39-201ENST00000327028 ARHGAP23Q9P227 1491 aa14.56□□□□□ -0.08
VIPAS39-201ENST00000327028 ROCK2O75116 1388 aaKnown RBP14.55□□□□□ -0.08
VIPAS39-201ENST00000327028 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.54□□□□□ -0.08
VIPAS39-201ENST00000327028 SETBP1Q9Y6X0 1596 aa14.53□□□□□ -0.08
VIPAS39-201ENST00000327028 NUTM2DQ5VT03 806 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-201ENST00000327028 THEMISQ8N1K5 641 aaPredicted RBP14.52□□□□□ -0.09
VIPAS39-201ENST00000327028 HDGFP51858 240 aaKnown RBP14.51□□□□□ -0.09
VIPAS39-201ENST00000327028 IQGAP1P46940 1657 aa14.51□□□□□ -0.09
VIPAS39-201ENST00000327028 NRXN3Q9Y4C0 1643 aa14.5□□□□□ -0.09
VIPAS39-201ENST00000327028 NBPF1Q3BBV0 1214 aa14.5□□□□□ -0.09
VIPAS39-201ENST00000327028 CARD11Q9BXL7 1154 aa14.5□□□□□ -0.09
VIPAS39-201ENST00000327028 C14orf93Q9H972 538 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-201ENST00000327028 ADGRB1O14514 1584 aa14.5□□□□□ -0.09
VIPAS39-201ENST00000327028 SETD1AO15047 1707 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-201ENST00000327028 USP47Q96K76 1375 aa14.49□□□□□ -0.09
VIPAS39-201ENST00000327028 ALKQ9UM73 1620 aa14.49□□□□□ -0.09
VIPAS39-201ENST00000327028 EIF4G2P78344 907 aaKnown RBP eCLIP14.49□□□□□ -0.09
VIPAS39-201ENST00000327028 CFAP70Q5T0N1 1121 aa14.49□□□□□ -0.09
VIPAS39-201ENST00000327028 SCAF11Q99590 1463 aaKnown RBP14.49□□□□□ -0.09
VIPAS39-201ENST00000327028 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-201ENST00000327028 ASXL1Q8IXJ9 1541 aa14.48□□□□□ -0.09
VIPAS39-201ENST00000327028 PLEKHG1Q9ULL1 1385 aa14.48□□□□□ -0.09
VIPAS39-201ENST00000327028 HSPA5P11021 654 aaKnown RBP14.47□□□□□ -0.09
VIPAS39-201ENST00000327028 EID1Q9Y6B2 187 aa14.47□□□□□ -0.09
VIPAS39-201ENST00000327028 LTKP29376 864 aa14.46□□□□□ -0.09
VIPAS39-201ENST00000327028 POLR1AO95602 1720 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-201ENST00000327028 TXNDC2Q86VQ3 553 aa14.45□□□□□ -0.1
VIPAS39-201ENST00000327028 DIP2AQ14689 1571 aa14.45□□□□□ -0.1
VIPAS39-201ENST00000327028 ADAMTS13Q76LX8 1427 aa14.43□□□□□ -0.1
VIPAS39-201ENST00000327028 MED14O60244 1454 aa14.43□□□□□ -0.1
VIPAS39-201ENST00000327028 EIF3AQ14152 1382 aaKnown RBP14.43□□□□□ -0.1
VIPAS39-201ENST00000327028 LMTK3Q96Q04 1460 aa14.42□□□□□ -0.1
VIPAS39-201ENST00000327028 ARHGEF28Q8N1W1 1705 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-201ENST00000327028 ANKLE2Q86XL3 938 aa14.41□□□□□ -0.1
VIPAS39-201ENST00000327028 HIRIP3Q9BW71 556 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-201ENST00000327028 KNDC1Q76NI1 1749 aa14.4□□□□□ -0.1
VIPAS39-201ENST00000327028 YTHDC2Q9H6S0 1430 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-201ENST00000327028 TMEM132EQ6IEE7 984 aa14.4□□□□□ -0.1
VIPAS39-201ENST00000327028 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
VIPAS39-201ENST00000327028 ST20-MTHFSA0A0A6YYL1 179 aa14.39□□□□□ -0.11
VIPAS39-201ENST00000327028 BCANQ96GW7 911 aa14.39□□□□□ -0.11
VIPAS39-201ENST00000327028 DLC1Q96QB1 1528 aa14.38□□□□□ -0.11
VIPAS39-201ENST00000327028 LRPPRCP42704 1394 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-201ENST00000327028 METP08581 1390 aa14.38□□□□□ -0.11
VIPAS39-201ENST00000327028 NPHP4O75161 1426 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-201ENST00000327028 QRICH2Q9H0J4 1663 aa14.37□□□□□ -0.11
VIPAS39-201ENST00000327028 TBX22Q9Y458 520 aa14.36□□□□□ -0.11
VIPAS39-201ENST00000327028 CPS1P31327 1500 aa14.36□□□□□ -0.11
VIPAS39-201ENST00000327028 TECPR2O15040 1411 aa14.36□□□□□ -0.11
VIPAS39-201ENST00000327028 TRAK1Q9UPV9 953 aa14.35□□□□□ -0.11
VIPAS39-201ENST00000327028 ABCC11Q96J66 1382 aa14.35□□□□□ -0.11
VIPAS39-201ENST00000327028 SBNO2Q9Y2G9 1366 aa14.34□□□□□ -0.11
VIPAS39-201ENST00000327028 TESK2Q96S53 571 aa14.34□□□□□ -0.11
VIPAS39-201ENST00000327028 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
VIPAS39-201ENST00000327028 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-201ENST00000327028 XRN1Q8IZH2 1706 aaKnown RBP14.34□□□□□ -0.11
VIPAS39-201ENST00000327028 SLC26A8Q96RN1 970 aa14.34□□□□□ -0.11
VIPAS39-201ENST00000327028 NCKAP5LQ9HCH0 1330 aa14.33□□□□□ -0.11
VIPAS39-201ENST00000327028 STK26Q9P289 416 aa14.33□□□□□ -0.12
VIPAS39-201ENST00000327028 CCDC7Q96M83 1385 aa14.33□□□□□ -0.12
VIPAS39-201ENST00000327028 PTPRUQ92729 1446 aa14.32□□□□□ -0.12
VIPAS39-201ENST00000327028 WASHC2AQ641Q2 1341 aa14.32□□□□□ -0.12
VIPAS39-201ENST00000327028 STRCQ7RTU9 1775 aa14.32□□□□□ -0.12
VIPAS39-201ENST00000327028 C11orf95C9JLR9 678 aaPredicted RBP14.31□□□□□ -0.12
VIPAS39-201ENST00000327028 HSPA2P54652 639 aa14.31□□□□□ -0.12
VIPAS39-201ENST00000327028 FAM135BQ49AJ0 1406 aa14.31□□□□□ -0.12
VIPAS39-201ENST00000327028 CHD2O14647 1828 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-201ENST00000327028 KIF7Q2M1P5 1343 aa14.31□□□□□ -0.12
VIPAS39-201ENST00000327028 DISP3Q9P2K9 1392 aa14.3□□□□□ -0.12
VIPAS39-201ENST00000327028 PTCH1Q13635 1447 aa14.3□□□□□ -0.12
VIPAS39-201ENST00000327028 SLC24A1O60721 1099 aa14.3□□□□□ -0.12
VIPAS39-201ENST00000327028 SIRT1Q96EB6 747 aa14.3□□□□□ -0.12
VIPAS39-201ENST00000327028 TMF1P82094 1093 aa14.29□□□□□ -0.12
VIPAS39-201ENST00000327028 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
VIPAS39-201ENST00000327028 PRAM1Q96QH2 718 aa14.28□□□□□ -0.12
VIPAS39-201ENST00000327028 ROBO2Q9HCK4 1378 aa14.27□□□□□ -0.12
VIPAS39-201ENST00000327028 POGKQ9P215 609 aa14.27□□□□□ -0.13
VIPAS39-201ENST00000327028 TULP4Q9NRJ4 1543 aa14.27□□□□□ -0.13
VIPAS39-201ENST00000327028 PLEKHH1Q9ULM0 1364 aa14.26□□□□□ -0.13
VIPAS39-201ENST00000327028 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
VIPAS39-201ENST00000327028 CDCA8Q53HL2 280 aa14.25□□□□□ -0.13
VIPAS39-201ENST00000327028 ADGRB2O60241 1585 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms