RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 SEC24BO95487 1268 aa12.96□□□□□ -0.33
SCMH1-201ENST00000326197 L1TD1Q5T7N2 865 aaKnown RBP12.96□□□□□ -0.33
SCMH1-201ENST00000326197 KDM5DQ9BY66 1539 aa12.95□□□□□ -0.34
SCMH1-201ENST00000326197 ATP10BO94823 1461 aa12.95□□□□□ -0.34
SCMH1-201ENST00000326197 CROCC2H7BZ55 1655 aa12.95□□□□□ -0.34
SCMH1-201ENST00000326197 EIF3AQ14152 1382 aaKnown RBP12.95□□□□□ -0.34
SCMH1-201ENST00000326197 CHGAP10645 457 aaKnown RBP12.95□□□□□ -0.34
SCMH1-201ENST00000326197 FAM43AQ8N2R8 423 aa12.95□□□□□ -0.34
SCMH1-201ENST00000326197 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
SCMH1-201ENST00000326197 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
SCMH1-201ENST00000326197 E9PCH4 1651 aa12.94□□□□□ -0.34
SCMH1-201ENST00000326197 NAP1L5Q96NT1 182 aaPredicted RBP12.93□□□□□ -0.34
SCMH1-201ENST00000326197 NKTRP30414 1462 aaKnown RBP12.93□□□□□ -0.34
SCMH1-201ENST00000326197 INSRP06213 1382 aa12.93□□□□□ -0.34
SCMH1-201ENST00000326197 PTPRGP23470 1445 aa12.93□□□□□ -0.34
SCMH1-201ENST00000326197 PMFBP1Q8TBY8 1022 aa12.93□□□□□ -0.34
SCMH1-201ENST00000326197 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
SCMH1-201ENST00000326197 PDE3AQ14432 1141 aa12.92□□□□□ -0.34
SCMH1-201ENST00000326197 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
SCMH1-201ENST00000326197 FTSJ3Q8IY81 847 aaKnown RBP12.92□□□□□ -0.34
SCMH1-201ENST00000326197 TRPM1Q7Z4N2 1603 aa12.92□□□□□ -0.34
SCMH1-201ENST00000326197 MFAP1P55081 439 aaKnown RBP12.91□□□□□ -0.34
SCMH1-201ENST00000326197 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
SCMH1-201ENST00000326197 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
SCMH1-201ENST00000326197 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
SCMH1-201ENST00000326197 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
SCMH1-201ENST00000326197 GOLGA6L3A6NEY3 463 aa12.91□□□□□ -0.34
SCMH1-201ENST00000326197 CDC42BPAQ5VT25 1732 aa12.9□□□□□ -0.34
SCMH1-201ENST00000326197 ABCC10Q5T3U5 1492 aa12.9□□□□□ -0.34
SCMH1-201ENST00000326197 RWDD1Q9H446 243 aaPredicted RBP12.9□□□□□ -0.34
SCMH1-201ENST00000326197 PDZRN3Q9UPQ7 1066 aa12.9□□□□□ -0.34
SCMH1-201ENST00000326197 PLA2R1Q13018 1463 aa12.89□□□□□ -0.35
SCMH1-201ENST00000326197 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
SCMH1-201ENST00000326197 WWC1Q8IX03 1113 aa12.89□□□□□ -0.35
SCMH1-201ENST00000326197 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
SCMH1-201ENST00000326197 CFAP70Q5T0N1 1121 aa12.87□□□□□ -0.35
SCMH1-201ENST00000326197 HSP90AA1P07900 732 aaKnown RBP12.87□□□□□ -0.35
SCMH1-201ENST00000326197 TNNQ9UQP3 1299 aa12.87□□□□□ -0.35
SCMH1-201ENST00000326197 PRDM15P57071 1507 aaPredicted RBP12.87□□□□□ -0.35
SCMH1-201ENST00000326197 ADCY10Q96PN6 1610 aa12.87□□□□□ -0.35
SCMH1-201ENST00000326197 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
SCMH1-201ENST00000326197 PNNQ9H307 717 aaKnown RBP12.87□□□□□ -0.35
SCMH1-201ENST00000326197 ASXL1Q8IXJ9 1541 aa12.86□□□□□ -0.35
SCMH1-201ENST00000326197 SYCP2Q9BX26 1530 aa12.86□□□□□ -0.35
SCMH1-201ENST00000326197 TCP11L2Q8N4U5 519 aa12.86□□□□□ -0.35
SCMH1-201ENST00000326197 CYB5RLQ6IPT4 315 aa12.86□□□□□ -0.35
SCMH1-201ENST00000326197 CFAP53Q96M91 514 aa12.86□□□□□ -0.35
SCMH1-201ENST00000326197 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
SCMH1-201ENST00000326197 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
SCMH1-201ENST00000326197 USP19O94966 1318 aa12.86□□□□□ -0.35
SCMH1-201ENST00000326197 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
SCMH1-201ENST00000326197 EFCAB2Q5VUJ9 269 aa12.85□□□□□ -0.35
SCMH1-201ENST00000326197 HSCBQ8IWL3 235 aa12.85□□□□□ -0.35
SCMH1-201ENST00000326197 EIF2AK4Q9P2K8 1649 aaKnown RBP12.85□□□□□ -0.35
SCMH1-201ENST00000326197 NUP160Q12769 1436 aa12.85□□□□□ -0.35
SCMH1-201ENST00000326197 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
SCMH1-201ENST00000326197 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCMH1-201ENST00000326197 TRMT2AQ8IZ69 625 aaKnown RBP12.85□□□□□ -0.35
SCMH1-201ENST00000326197 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
SCMH1-201ENST00000326197 PIK3C2GO75747 1445 aa12.84□□□□□ -0.35
SCMH1-201ENST00000326197 RARSP54136 660 aaKnown RBP12.84□□□□□ -0.35
SCMH1-201ENST00000326197 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
SCMH1-201ENST00000326197 RLBP1P12271 317 aa12.84□□□□□ -0.35
SCMH1-201ENST00000326197 UBE2Q2Q8WVN8 375 aa12.84□□□□□ -0.35
SCMH1-201ENST00000326197 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
SCMH1-201ENST00000326197 RRAGDQ9NQL2 400 aaPredicted RBP12.84□□□□□ -0.35
SCMH1-201ENST00000326197 C22orf23Q9BZE7 217 aa12.83□□□□□ -0.36
SCMH1-201ENST00000326197 ITPRIPQ8IWB1 547 aa12.83□□□□□ -0.36
SCMH1-201ENST00000326197 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.36
SCMH1-201ENST00000326197 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
SCMH1-201ENST00000326197 SCAF11Q99590 1463 aaKnown RBP12.83□□□□□ -0.36
SCMH1-201ENST00000326197 MCM4P33991 863 aa12.82□□□□□ -0.36
SCMH1-201ENST00000326197 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
SCMH1-201ENST00000326197 ARHGEF5Q12774 1597 aa12.82□□□□□ -0.36
SCMH1-201ENST00000326197 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
SCMH1-201ENST00000326197 KIF3BO15066 747 aa12.82□□□□□ -0.36
SCMH1-201ENST00000326197 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
SCMH1-201ENST00000326197 TRIM44Q96DX7 344 aaPredicted RBP12.82□□□□□ -0.36
SCMH1-201ENST00000326197 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
SCMH1-201ENST00000326197 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
SCMH1-201ENST00000326197 GLIPR1L2Q4G1C9 344 aa12.82□□□□□ -0.36
SCMH1-201ENST00000326197 CHMP5Q9NZZ3 219 aa12.82□□□□□ -0.36
SCMH1-201ENST00000326197 TRAK2O60296 914 aa12.81□□□□□ -0.36
SCMH1-201ENST00000326197 AFAP1Q8N556 730 aa12.81□□□□□ -0.36
SCMH1-201ENST00000326197 CARD14Q9BXL6 1004 aa12.81□□□□□ -0.36
SCMH1-201ENST00000326197 PANK2Q9BZ23 570 aa12.81□□□□□ -0.36
SCMH1-201ENST00000326197 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
SCMH1-201ENST00000326197 SAMD9LQ8IVG5 1584 aa12.81□□□□□ -0.36
SCMH1-201ENST00000326197 ZKSCAN2Q63HK3 967 aa12.81□□□□□ -0.36
SCMH1-201ENST00000326197 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
SCMH1-201ENST00000326197 XRCC6P12956 609 aaKnown RBP eCLIP12.8□□□□□ -0.36
SCMH1-201ENST00000326197 MTHFSP49914 203 aa12.8□□□□□ -0.36
SCMH1-201ENST00000326197 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
SCMH1-201ENST00000326197 ABCA8O94911 1581 aa12.8□□□□□ -0.36
SCMH1-201ENST00000326197 SLC12A5Q9H2X9 1139 aa12.8□□□□□ -0.36
SCMH1-201ENST00000326197 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
SCMH1-201ENST00000326197 KANK1Q14678 1352 aa12.79□□□□□ -0.36
SCMH1-201ENST00000326197 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
SCMH1-201ENST00000326197 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.368e-7■■■■□ 21
SCMH1-201ENST00000326197 MVPQ14764 893 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms