RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 TMEM94Q12767 1356 aa30.77■■■□□ 2.52
SERF1A-201ENST00000317633 PROSER2Q86WR7 435 aaPredicted RBP30.76■■■□□ 2.51
SERF1A-201ENST00000317633 IQGAP3Q86VI3 1631 aa30.76■■■□□ 2.51
SERF1A-201ENST00000317633 E9PCH4 1651 aa30.75■■■□□ 2.51
SERF1A-201ENST00000317633 PPP1R15AO75807 674 aaPredicted RBP30.75■■■□□ 2.51
SERF1A-201ENST00000317633 TMEM131LA2VDJ0 1609 aa30.75■■■□□ 2.51
SERF1A-201ENST00000317633 ZFYVE9O95405 1425 aa30.74■■■□□ 2.51
SERF1A-201ENST00000317633 NKTRP30414 1462 aaKnown RBP30.74■■■□□ 2.51
SERF1A-201ENST00000317633 RIMS2Q9UQ26 1411 aa30.73■■■□□ 2.51
SERF1A-201ENST00000317633 ITGAEP38570 1179 aa30.73■■■□□ 2.51
SERF1A-201ENST00000317633 PHF23Q9BUL5 403 aaPredicted RBP30.73■■■□□ 2.51
SERF1A-201ENST00000317633 PLEKHG1Q9ULL1 1385 aa30.73■■■□□ 2.51
SERF1A-201ENST00000317633 NWD1Q149M9 1564 aa30.73■■■□□ 2.51
SERF1A-201ENST00000317633 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.71■■■□□ 2.51
SERF1A-201ENST00000317633 CHGAP10645 457 aaKnown RBP30.7■■■□□ 2.51
SERF1A-201ENST00000317633 FAM135BQ49AJ0 1406 aa30.7■■■□□ 2.5
SERF1A-201ENST00000317633 NUP155O75694 1391 aa30.69■■■□□ 2.5
SERF1A-201ENST00000317633 CHD2O14647 1828 aaKnown RBP30.67■■■□□ 2.5
SERF1A-201ENST00000317633 PPARGC1BQ86YN6 1023 aaKnown RBP30.66■■■□□ 2.5
SERF1A-201ENST00000317633 RBM33Q96EV2 1170 aaKnown RBP30.63■■■□□ 2.49
SERF1A-201ENST00000317633 TBX22Q9Y458 520 aa30.63■■■□□ 2.49
SERF1A-201ENST00000317633 MSH6P52701 1360 aa30.63■■■□□ 2.49
SERF1A-201ENST00000317633 ROBO1Q9Y6N7 1651 aa30.6■■■□□ 2.49
SERF1A-201ENST00000317633 DIP2AQ14689 1571 aa30.57■■■□□ 2.48
SERF1A-201ENST00000317633 NUTM2DQ5VT03 806 aaPredicted RBP30.55■■■□□ 2.48
SERF1A-201ENST00000317633 NCOA3Q9Y6Q9 1424 aa30.54■■■□□ 2.48
SERF1A-201ENST00000317633 SPHKAPQ2M3C7 1700 aa30.53■■■□□ 2.48
SERF1A-201ENST00000317633 SLAIN2Q9P270 581 aa30.53■■■□□ 2.48
SERF1A-201ENST00000317633 ADAMTS13Q76LX8 1427 aa30.53■■■□□ 2.48
SERF1A-201ENST00000317633 PIK3R4Q99570 1358 aa30.53■■■□□ 2.48
SERF1A-201ENST00000317633 C14orf37Q86TY3 774 aa30.49■■■□□ 2.47
SERF1A-201ENST00000317633 RRBP1Q9P2E9 1410 aaKnown RBP30.48■■■□□ 2.47
SERF1A-201ENST00000317633 TRPM2O94759 1503 aa30.47■■■□□ 2.47
SERF1A-201ENST00000317633 PHLPP1O60346 1717 aa30.44■■■□□ 2.46
SERF1A-201ENST00000317633 ZNF326Q5BKZ1 582 aaKnown RBP30.43■■■□□ 2.46
SERF1A-201ENST00000317633 C19orf44Q9H6X5 657 aa30.42■■■□□ 2.46
SERF1A-201ENST00000317633 CADPS2Q86UW7 1296 aa30.41■■■□□ 2.46
SERF1A-201ENST00000317633 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.4■■■□□ 2.46
SERF1A-201ENST00000317633 AMOTL2Q9Y2J4 779 aa30.4■■■□□ 2.46
SERF1A-201ENST00000317633 ATF3P18847 181 aa30.39■■■□□ 2.46
SERF1A-201ENST00000317633 RGS17Q9UGC6 210 aaPredicted RBP30.39■■■□□ 2.46
SERF1A-201ENST00000317633 NAIPQ13075 1403 aa30.39■■■□□ 2.45
SERF1A-201ENST00000317633 SETBP1Q9Y6X0 1596 aa30.37■■■□□ 2.45
SERF1A-201ENST00000317633 JCADQ9P266 1359 aa30.36■■■□□ 2.45
SERF1A-201ENST00000317633 NRXN3Q9Y4C0 1643 aa30.36■■■□□ 2.45
SERF1A-201ENST00000317633 KIF1BO60333 1816 aa30.36■■■□□ 2.45
SERF1A-201ENST00000317633 CLTCL1P53675 1640 aa30.34■■■□□ 2.45
SERF1A-201ENST00000317633 PTPRUQ92729 1446 aa30.34■■■□□ 2.45
SERF1A-201ENST00000317633 XRN1Q8IZH2 1706 aaKnown RBP30.31■■■□□ 2.44
SERF1A-201ENST00000317633 COL16A1Q07092 1604 aaPredicted RBP30.3■■■□□ 2.44
SERF1A-201ENST00000317633 TRIM52Q96A61 297 aa30.3■■■□□ 2.44
SERF1A-201ENST00000317633 HFM1A2PYH4 1435 aa30.29■■■□□ 2.44
SERF1A-201ENST00000317633 NEXMIFQ5QGS0 1516 aa30.28■■■□□ 2.44
SERF1A-201ENST00000317633 DCCP43146 1447 aa30.28■■■□□ 2.44
SERF1A-201ENST00000317633 AHDC1Q5TGY3 1603 aaPredicted RBP30.25■■■□□ 2.43
SERF1A-201ENST00000317633 METP08581 1390 aa30.24■■■□□ 2.43
SERF1A-201ENST00000317633 POTEAQ6S8J7 498 aa30.23■■■□□ 2.43
SERF1A-201ENST00000317633 SPATA31A6Q5VVP1 1343 aa30.22■■■□□ 2.43
SERF1A-201ENST00000317633 SLC4A1APQ9BWU0 796 aaKnown RBP30.21■■■□□ 2.43
SERF1A-201ENST00000317633 VGFO15240 615 aaPredicted RBP30.2■■■□□ 2.43
SERF1A-201ENST00000317633 BRINP3Q76B58 766 aa30.19■■■□□ 2.42
SERF1A-201ENST00000317633 SHPRHQ149N8 1683 aa30.18■■■□□ 2.42
SERF1A-201ENST00000317633 RPGRIP1LQ68CZ1 1315 aa30.17■■■□□ 2.42
SERF1A-201ENST00000317633 MST1RQ04912 1400 aa30.14■■■□□ 2.42
SERF1A-201ENST00000317633 ADGRL3Q9HAR2 1447 aa30.14■■■□□ 2.42
SERF1A-201ENST00000317633 MEX3CQ5U5Q3 659 aaKnown RBP30.14■■■□□ 2.42
SERF1A-201ENST00000317633 ASXL1Q8IXJ9 1541 aa30.13■■■□□ 2.41
SERF1A-201ENST00000317633 LRP6O75581 1613 aa30.11■■■□□ 2.41
SERF1A-201ENST00000317633 NALCNQ8IZF0 1738 aa30.1■■■□□ 2.41
SERF1A-201ENST00000317633 PPLO60437 1756 aa30.09■■■□□ 2.41
SERF1A-201ENST00000317633 NHSL1Q5SYE7 1610 aa30.09■■■□□ 2.41
SERF1A-201ENST00000317633 SETD1AO15047 1707 aaKnown RBP30.08■■■□□ 2.41
SERF1A-201ENST00000317633 PTCH1Q13635 1447 aa30.07■■■□□ 2.4
SERF1A-201ENST00000317633 ZNF772Q68DY9 489 aaPredicted RBP30.07■■■□□ 2.4
SERF1A-201ENST00000317633 SETD5Q9C0A6 1442 aa30.05■■■□□ 2.4
SERF1A-201ENST00000317633 LRRC59Q96AG4 307 aaKnown RBP30.05■■■□□ 2.4
SERF1A-201ENST00000317633 CCDC144AA2RUR9 1427 aa30.01■■■□□ 2.39
SERF1A-201ENST00000317633 PRAG1Q86YV5 1406 aa30.01■■■□□ 2.39
SERF1A-201ENST00000317633 NUTM2BA6NNL0 878 aaPredicted RBP30■■■□□ 2.39
SERF1A-201ENST00000317633 NUTM2EB1AL46 878 aaPredicted RBP30■■■□□ 2.39
SERF1A-201ENST00000317633 FOXD1Q16676 465 aa30■■■□□ 2.39
SERF1A-201ENST00000317633 NUTM2AQ8IVF1 878 aaPredicted RBP30■■■□□ 2.39
SERF1A-201ENST00000317633 ROBO2Q9HCK4 1378 aa30■■■□□ 2.39
SERF1A-201ENST00000317633 C1orf167Q5SNV9 1468 aa29.98■■■□□ 2.39
SERF1A-201ENST00000317633 ACIN1Q9UKV3 1341 aaKnown RBP29.96■■■□□ 2.39
SERF1A-201ENST00000317633 MPHOSPH9Q99550 1183 aa29.96■■■□□ 2.39
SERF1A-201ENST00000317633 DDX17Q92841 729 aaKnown RBP29.93■■■□□ 2.38
SERF1A-201ENST00000317633 ANKRD30BQ9BXX2 1392 aa29.91■■■□□ 2.38
SERF1A-201ENST00000317633 RGL3Q3MIN7 710 aa29.91■■■□□ 2.38
SERF1A-201ENST00000317633 LAMC1P11047 1609 aa29.91■■■□□ 2.38
SERF1A-201ENST00000317633 PNPLA6Q8IY17 1366 aa29.9■■■□□ 2.38
SERF1A-201ENST00000317633 SPATA31E1Q6ZUB1 1445 aa29.89■■■□□ 2.38
SERF1A-201ENST00000317633 IFT172Q9UG01 1749 aa29.89■■■□□ 2.38
SERF1A-201ENST00000317633 RXRBP28702 533 aa29.89■■■□□ 2.38
SERF1A-201ENST00000317633 ORAI2Q96SN7 254 aa29.88■■■□□ 2.37
SERF1A-201ENST00000317633 AFF2P51816 1311 aa29.88■■■□□ 2.37
SERF1A-201ENST00000317633 ADGRF5Q8IZF2 1346 aa29.88■■■□□ 2.37
SERF1A-201ENST00000317633 SOS2Q07890 1332 aaPredicted RBP29.85■■■□□ 2.37
SERF1A-201ENST00000317633 C8orf37Q96NL8 207 aa29.84■■■□□ 2.37
SERF1A-201ENST00000317633 CDC42BPGQ6DT37 1551 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms