RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 POGKQ9P215 609 aa4.7□□□□□ -1.66
GEN1-201ENST00000317402 NAIPQ13075 1403 aa4.7□□□□□ -1.66
GEN1-201ENST00000317402 ADCY10Q96PN6 1610 aa4.7□□□□□ -1.66
GEN1-201ENST00000317402 DHX29Q7Z478 1369 aaKnown RBP4.7□□□□□ -1.66
GEN1-201ENST00000317402 PPM1GO15355 546 aaPredicted RBP4.7□□□□□ -1.66
GEN1-201ENST00000317402 LARP6Q9BRS8 491 aaKnown RBP4.7□□□□□ -1.66
GEN1-201ENST00000317402 PANK2Q9BZ23 570 aa4.7□□□□□ -1.66
GEN1-201ENST00000317402 ASXL3Q9C0F0 2248 aa4.7□□□□□ -1.66
GEN1-201ENST00000317402 ADAMTS12P58397 1594 aa4.69□□□□□ -1.66
GEN1-201ENST00000317402 ESPL1Q14674 2120 aa4.69□□□□□ -1.66
GEN1-201ENST00000317402 RLBP1P12271 317 aa4.69□□□□□ -1.66
GEN1-201ENST00000317402 RBM42Q9BTD8 480 aaKnown RBP4.69□□□□□ -1.66
GEN1-201ENST00000317402 TRAK1Q9UPV9 953 aa4.69□□□□□ -1.66
GEN1-201ENST00000317402 CACNA1CQ13936 2221 aa4.69□□□□□ -1.66
GEN1-201ENST00000317402 TSR2Q969E8 191 aaKnown RBP4.69□□□□□ -1.66
GEN1-201ENST00000317402 SNRNP200O75643 2136 aaKnown RBP4.69□□□□□ -1.66
GEN1-201ENST00000317402 CANXP27824 592 aaKnown RBP4.69□□□□□ -1.66
GEN1-201ENST00000317402 KRT24Q2M2I5 525 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 DIDO1Q9BTC0 2240 aaKnown RBP4.68□□□□□ -1.66
GEN1-201ENST00000317402 CEP250Q9BV73 2442 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 PDE4AP27815 886 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 FOXD4L6Q3SYB3 417 aaPredicted RBP4.68□□□□□ -1.66
GEN1-201ENST00000317402 FOXD4L3Q6VB84 417 aaPredicted RBP4.68□□□□□ -1.66
GEN1-201ENST00000317402 ARID1AO14497 2285 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 MIA2Q96PC5 1412 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 FAM177BA6PVY3 158 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 CYB5RLQ6IPT4 315 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 TMC1Q8TDI8 760 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 EIF4G2P78344 907 aaKnown RBP eCLIP4.68□□□□□ -1.66
GEN1-201ENST00000317402 APBB1O00213 710 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 KNTC1P50748 2209 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 UGGT2Q9NYU1 1516 aa4.68□□□□□ -1.66
GEN1-201ENST00000317402 GRIN2BQ13224 1484 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 PPP4R2Q9NY27 417 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 COG6Q9Y2V7 657 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 NCOA2Q15596 1464 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 PLEKHH1Q9ULM0 1364 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 PCM1Q15154 2024 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 RRAGDQ9NQL2 400 aaPredicted RBP4.67□□□□□ -1.66
GEN1-201ENST00000317402 TAF7LQ5H9L4 462 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 RAPGEF3O95398 923 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 NUTM2GQ5VZR2 741 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 FGD6Q6ZV73 1430 aa4.67□□□□□ -1.66
GEN1-201ENST00000317402 APAF1O14727 1248 aa4.66□□□□□ -1.66
GEN1-201ENST00000317402 TARBP1Q13395 1621 aaKnown RBP4.66□□□□□ -1.66
GEN1-201ENST00000317402 NCBP3Q53F19 620 aaKnown RBP4.66□□□□□ -1.66
GEN1-201ENST00000317402 PNISRQ8TF01 805 aaKnown RBP4.66□□□□□ -1.66
GEN1-201ENST00000317402 SHANK2Q9UPX8 1470 aa4.66□□□□□ -1.66
GEN1-201ENST00000317402 TSHZ3Q63HK5 1081 aa4.66□□□□□ -1.66
GEN1-201ENST00000317402 CUL9Q8IWT3 2517 aa4.66□□□□□ -1.66
GEN1-201ENST00000317402 DNTTIP2Q5QJE6 756 aaKnown RBP4.66□□□□□ -1.66
GEN1-201ENST00000317402 SNAPC4Q5SXM2 1469 aa4.66□□□□□ -1.66
GEN1-201ENST00000317402 PLEKHH2Q8IVE3 1493 aa4.66□□□□□ -1.66
GEN1-201ENST00000317402 GAPVD1Q14C86 1478 aa4.66□□□□□ -1.66
GEN1-201ENST00000317402 TEX14Q8IWB6 1497 aa4.66□□□□□ -1.66
GEN1-201ENST00000317402 CFAP70Q5T0N1 1121 aa4.65□□□□□ -1.66
GEN1-201ENST00000317402 TNNT3P45378 269 aaPredicted RBP4.65□□□□□ -1.66
GEN1-201ENST00000317402 PAXIP1Q6ZW49 1069 aaPredicted RBP4.65□□□□□ -1.66
GEN1-201ENST00000317402 FBXO31Q5XUX0 539 aaPredicted RBP4.65□□□□□ -1.66
GEN1-201ENST00000317402 DCTN1Q14203 1278 aa4.65□□□□□ -1.67
GEN1-201ENST00000317402 CD2BP2O95400 341 aaKnown RBP4.65□□□□□ -1.67
GEN1-201ENST00000317402 COL9A3Q14050 684 aaPredicted RBP4.65□□□□□ -1.67
GEN1-201ENST00000317402 NECTIN2Q92692 538 aa4.65□□□□□ -1.67
GEN1-201ENST00000317402 PPFIA3O75145 1194 aa4.65□□□□□ -1.67
GEN1-201ENST00000317402 RRP1P56182 461 aaKnown RBP4.64□□□□□ -1.67
GEN1-201ENST00000317402 BCORL1Q5H9F3 1711 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 CEBPAP49715 358 aaPredicted RBP4.64□□□□□ -1.67
GEN1-201ENST00000317402 CARD14Q9BXL6 1004 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 ERCC6L2Q5T890 1561 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 ARAP3Q8WWN8 1544 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 NOL8Q76FK4 1167 aaKnown RBP4.64□□□□□ -1.67
GEN1-201ENST00000317402 C16orf71Q8IYS4 520 aaPredicted RBP4.64□□□□□ -1.67
GEN1-201ENST00000317402 TSC1Q92574 1164 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 CKAP5Q14008 2032 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 NUP155O75694 1391 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 DDX54Q8TDD1 881 aaKnown RBP4.64□□□□□ -1.67
GEN1-201ENST00000317402 CABP2Q9NPB3 220 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 MIS18AQ9NYP9 233 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 TAOK2Q9UL54 1235 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 KIF3BO15066 747 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 CARMIL2Q6F5E8 1435 aa4.64□□□□□ -1.67
GEN1-201ENST00000317402 UPF2Q9HAU5 1272 aaKnown RBP4.64□□□□□ -1.67
GEN1-201ENST00000317402 ABCC5O15440 1437 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 CROCC2H7BZ55 1655 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 C8orf34Q49A92 452 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 KIF1BO60333 1816 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 TPRP12270 2363 aaKnown RBP4.63□□□□□ -1.67
GEN1-201ENST00000317402 ARHGEF11O15085 1522 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 CALRP27797 417 aaKnown RBP4.63□□□□□ -1.67
GEN1-201ENST00000317402 CNTLNQ9NXG0 1405 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 PNNQ9H307 717 aaKnown RBP4.63□□□□□ -1.67
GEN1-201ENST00000317402 USP35Q9P2H5 1018 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 NUDCQ9Y266 331 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 CAMSAP2Q08AD1 1489 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 CFAP74Q9C0B2 1584 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 KIAA0586Q9BVV6 1533 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 WDR7Q9Y4E6 1490 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 PATL2C9JE40 543 aaKnown RBP4.63□□□□□ -1.67
GEN1-201ENST00000317402 DUSP27Q5VZP5 1158 aa4.63□□□□□ -1.67
GEN1-201ENST00000317402 KLHL34Q8N239 644 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms