RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 ZFYVE9O95405 1425 aa26.85■■□□□ 1.89
EXOSC4-201ENST00000316052 PROSER2Q86WR7 435 aaPredicted RBP26.85■■□□□ 1.89
EXOSC4-201ENST00000316052 BCANQ96GW7 911 aa26.85■■□□□ 1.89
EXOSC4-201ENST00000316052 GCC2Q8IWJ2 1684 aa26.85■■□□□ 1.89
EXOSC4-201ENST00000316052 TMEM131LA2VDJ0 1609 aa26.83■■□□□ 1.88
EXOSC4-201ENST00000316052 ITGAEP38570 1179 aa26.82■■□□□ 1.88
EXOSC4-201ENST00000316052 RIMS2Q9UQ26 1411 aa26.82■■□□□ 1.88
EXOSC4-201ENST00000316052 E9PCH4 1651 aa26.81■■□□□ 1.88
EXOSC4-201ENST00000316052 FAM135BQ49AJ0 1406 aa26.8■■□□□ 1.88
EXOSC4-201ENST00000316052 CHGAP10645 457 aaKnown RBP26.79■■□□□ 1.88
EXOSC4-201ENST00000316052 PLEKHG1Q9ULL1 1385 aa26.79■■□□□ 1.88
EXOSC4-201ENST00000316052 HDGFP51858 240 aaKnown RBP26.78■■□□□ 1.88
EXOSC4-201ENST00000316052 PHF23Q9BUL5 403 aaPredicted RBP26.78■■□□□ 1.88
EXOSC4-201ENST00000316052 NWD1Q149M9 1564 aa26.78■■□□□ 1.88
EXOSC4-201ENST00000316052 IQGAP3Q86VI3 1631 aa26.77■■□□□ 1.88
EXOSC4-201ENST00000316052 PPP1R15AO75807 674 aaPredicted RBP26.77■■□□□ 1.88
EXOSC4-201ENST00000316052 NUP155O75694 1391 aa26.76■■□□□ 1.87
EXOSC4-201ENST00000316052 NKTRP30414 1462 aaKnown RBP26.75■■□□□ 1.87
EXOSC4-201ENST00000316052 NUTM2DQ5VT03 806 aaPredicted RBP26.75■■□□□ 1.87
EXOSC4-201ENST00000316052 CHD2O14647 1828 aaKnown RBP26.74■■□□□ 1.87
EXOSC4-201ENST00000316052 TBX22Q9Y458 520 aa26.73■■□□□ 1.87
EXOSC4-201ENST00000316052 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.72■■□□□ 1.87
EXOSC4-201ENST00000316052 ROBO1Q9Y6N7 1651 aa26.7■■□□□ 1.86
EXOSC4-201ENST00000316052 ADAMTS13Q76LX8 1427 aa26.68■■□□□ 1.86
EXOSC4-201ENST00000316052 RGS17Q9UGC6 210 aaPredicted RBP26.68■■□□□ 1.86
EXOSC4-201ENST00000316052 MSH6P52701 1360 aa26.68■■□□□ 1.86
EXOSC4-201ENST00000316052 SLAIN2Q9P270 581 aa26.67■■□□□ 1.86
EXOSC4-201ENST00000316052 NCOA3Q9Y6Q9 1424 aa26.58■■□□□ 1.85
EXOSC4-201ENST00000316052 PIK3R4Q99570 1358 aa26.58■■□□□ 1.84
EXOSC4-201ENST00000316052 DIP2AQ14689 1571 aa26.57■■□□□ 1.84
EXOSC4-201ENST00000316052 RRBP1Q9P2E9 1410 aaKnown RBP26.56■■□□□ 1.84
EXOSC4-201ENST00000316052 SPHKAPQ2M3C7 1700 aa26.56■■□□□ 1.84
EXOSC4-201ENST00000316052 C14orf37Q86TY3 774 aa26.56■■□□□ 1.84
EXOSC4-201ENST00000316052 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
EXOSC4-201ENST00000316052 AMOTL2Q9Y2J4 779 aa26.55■■□□□ 1.84
EXOSC4-201ENST00000316052 C19orf44Q9H6X5 657 aa26.53■■□□□ 1.84
EXOSC4-201ENST00000316052 PHLPP1O60346 1717 aa26.53■■□□□ 1.84
EXOSC4-201ENST00000316052 TRPM2O94759 1503 aa26.52■■□□□ 1.84
EXOSC4-201ENST00000316052 ZNF326Q5BKZ1 582 aaKnown RBP26.52■■□□□ 1.84
EXOSC4-201ENST00000316052 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.52■■□□□ 1.84
EXOSC4-201ENST00000316052 NAIPQ13075 1403 aa26.51■■□□□ 1.83
EXOSC4-201ENST00000316052 POTEAQ6S8J7 498 aa26.51■■□□□ 1.83
EXOSC4-201ENST00000316052 NRXN3Q9Y4C0 1643 aa26.5■■□□□ 1.83
EXOSC4-201ENST00000316052 CADPS2Q86UW7 1296 aa26.49■■□□□ 1.83
EXOSC4-201ENST00000316052 ATF3P18847 181 aa26.48■■□□□ 1.83
EXOSC4-201ENST00000316052 JCADQ9P266 1359 aa26.46■■□□□ 1.83
EXOSC4-201ENST00000316052 SETBP1Q9Y6X0 1596 aa26.46■■□□□ 1.83
EXOSC4-201ENST00000316052 CLTCL1P53675 1640 aa26.46■■□□□ 1.83
EXOSC4-201ENST00000316052 COL16A1Q07092 1604 aaPredicted RBP26.45■■□□□ 1.82
EXOSC4-201ENST00000316052 METP08581 1390 aa26.45■■□□□ 1.82
EXOSC4-201ENST00000316052 XRN1Q8IZH2 1706 aaKnown RBP26.42■■□□□ 1.82
EXOSC4-201ENST00000316052 NEXMIFQ5QGS0 1516 aa26.4■■□□□ 1.82
EXOSC4-201ENST00000316052 TRIM52Q96A61 297 aa26.4■■□□□ 1.82
EXOSC4-201ENST00000316052 BRINP3Q76B58 766 aa26.39■■□□□ 1.82
EXOSC4-201ENST00000316052 KIF1BO60333 1816 aa26.39■■□□□ 1.81
EXOSC4-201ENST00000316052 AHDC1Q5TGY3 1603 aaPredicted RBP26.38■■□□□ 1.81
EXOSC4-201ENST00000316052 HFM1A2PYH4 1435 aa26.37■■□□□ 1.81
EXOSC4-201ENST00000316052 DCCP43146 1447 aa26.35■■□□□ 1.81
EXOSC4-201ENST00000316052 LRP6O75581 1613 aa26.34■■□□□ 1.81
EXOSC4-201ENST00000316052 SLC4A1APQ9BWU0 796 aaKnown RBP26.33■■□□□ 1.81
EXOSC4-201ENST00000316052 SPATA31A6Q5VVP1 1343 aa26.33■■□□□ 1.81
EXOSC4-201ENST00000316052 MST1RQ04912 1400 aa26.31■■□□□ 1.8
EXOSC4-201ENST00000316052 SHPRHQ149N8 1683 aa26.29■■□□□ 1.8
EXOSC4-201ENST00000316052 VGFO15240 615 aaPredicted RBP26.29■■□□□ 1.8
EXOSC4-201ENST00000316052 ASXL1Q8IXJ9 1541 aa26.29■■□□□ 1.8
EXOSC4-201ENST00000316052 ADGRL3Q9HAR2 1447 aa26.28■■□□□ 1.8
EXOSC4-201ENST00000316052 MEX3CQ5U5Q3 659 aaKnown RBP26.27■■□□□ 1.8
EXOSC4-201ENST00000316052 FOXD1Q16676 465 aa26.26■■□□□ 1.79
EXOSC4-201ENST00000316052 SETD1AO15047 1707 aaKnown RBP26.25■■□□□ 1.79
EXOSC4-201ENST00000316052 RPGRIP1LQ68CZ1 1315 aa26.25■■□□□ 1.79
EXOSC4-201ENST00000316052 DDX17Q92841 729 aaKnown RBP26.25■■□□□ 1.79
EXOSC4-201ENST00000316052 NALCNQ8IZF0 1738 aa26.25■■□□□ 1.79
EXOSC4-201ENST00000316052 NUTM2BA6NNL0 878 aaPredicted RBP26.23■■□□□ 1.79
EXOSC4-201ENST00000316052 NUTM2EB1AL46 878 aaPredicted RBP26.23■■□□□ 1.79
EXOSC4-201ENST00000316052 NUTM2AQ8IVF1 878 aaPredicted RBP26.23■■□□□ 1.79
EXOSC4-201ENST00000316052 SETD5Q9C0A6 1442 aa26.22■■□□□ 1.79
EXOSC4-201ENST00000316052 ROBO2Q9HCK4 1378 aa26.22■■□□□ 1.79
EXOSC4-201ENST00000316052 NHSL1Q5SYE7 1610 aa26.22■■□□□ 1.79
EXOSC4-201ENST00000316052 PPLO60437 1756 aa26.2■■□□□ 1.79
EXOSC4-201ENST00000316052 ZNF772Q68DY9 489 aaPredicted RBP26.2■■□□□ 1.78
EXOSC4-201ENST00000316052 LRRC59Q96AG4 307 aaKnown RBP26.19■■□□□ 1.78
EXOSC4-201ENST00000316052 PTCH1Q13635 1447 aa26.19■■□□□ 1.78
EXOSC4-201ENST00000316052 C1orf167Q5SNV9 1468 aa26.17■■□□□ 1.78
EXOSC4-201ENST00000316052 MPHOSPH9Q99550 1183 aa26.15■■□□□ 1.78
EXOSC4-201ENST00000316052 ORAI2Q96SN7 254 aa26.14■■□□□ 1.78
EXOSC4-201ENST00000316052 PRAG1Q86YV5 1406 aa26.14■■□□□ 1.77
EXOSC4-201ENST00000316052 ADGRF5Q8IZF2 1346 aa26.14■■□□□ 1.77
EXOSC4-201ENST00000316052 RGL3Q3MIN7 710 aa26.13■■□□□ 1.77
EXOSC4-201ENST00000316052 PNPLA6Q8IY17 1366 aa26.12■■□□□ 1.77
EXOSC4-201ENST00000316052 AFF2P51816 1311 aa26.11■■□□□ 1.77
EXOSC4-201ENST00000316052 CCDC144AA2RUR9 1427 aa26.1■■□□□ 1.77
EXOSC4-201ENST00000316052 SPATA31E1Q6ZUB1 1445 aa26.1■■□□□ 1.77
EXOSC4-201ENST00000316052 RXRBP28702 533 aa26.09■■□□□ 1.77
EXOSC4-201ENST00000316052 LAMC1P11047 1609 aa26.06■■□□□ 1.76
EXOSC4-201ENST00000316052 SOS2Q07890 1332 aaPredicted RBP26.06■■□□□ 1.76
EXOSC4-201ENST00000316052 C8orf37Q96NL8 207 aa26.05■■□□□ 1.76
EXOSC4-201ENST00000316052 STK26Q9P289 416 aa26.05■■□□□ 1.76
EXOSC4-201ENST00000316052 WAPLQ7Z5K2 1190 aa26.03■■□□□ 1.76
EXOSC4-201ENST00000316052 ANKRD30BQ9BXX2 1392 aa26.03■■□□□ 1.76
EXOSC4-201ENST00000316052 IFT172Q9UG01 1749 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms