RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 RPGRIP1LQ68CZ1 1315 aa26.91■■□□□ 1.9
CDK4-202ENST00000312990 ZFYVE9O95405 1425 aa26.91■■□□□ 1.9
CDK4-202ENST00000312990 KDM2AQ9Y2K7 1162 aa26.9■■□□□ 1.9
CDK4-202ENST00000312990 SLIT1O75093 1534 aa26.89■■□□□ 1.9
CDK4-202ENST00000312990 RIMS2Q9UQ26 1411 aa26.88■■□□□ 1.89
CDK4-202ENST00000312990 ARHGAP23Q9P227 1491 aa26.88■■□□□ 1.89
CDK4-202ENST00000312990 NRXN1Q9ULB1 1477 aa26.88■■□□□ 1.89
CDK4-202ENST00000312990 TMEM2Q9UHN6 1383 aa26.88■■□□□ 1.89
CDK4-202ENST00000312990 PRAG1Q86YV5 1406 aa26.88■■□□□ 1.89
CDK4-202ENST00000312990 TRPM1Q7Z4N2 1603 aa26.85■■□□□ 1.89
CDK4-202ENST00000312990 NBPF8Q3BBV2 869 aa26.85■■□□□ 1.89
CDK4-202ENST00000312990 NUTM2DQ5VT03 806 aaPredicted RBP26.84■■□□□ 1.89
CDK4-202ENST00000312990 THEMISQ8N1K5 641 aaPredicted RBP26.84■■□□□ 1.89
CDK4-202ENST00000312990 STAC3Q96MF2 364 aa26.84■■□□□ 1.89
CDK4-202ENST00000312990 ADGRF5Q8IZF2 1346 aa26.84■■□□□ 1.89
CDK4-202ENST00000312990 KIAA1210Q9ULL0 1709 aa26.82■■□□□ 1.88
CDK4-202ENST00000312990 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
CDK4-202ENST00000312990 POLR1AO95602 1720 aaPredicted RBP26.81■■□□□ 1.88
CDK4-202ENST00000312990 PIK3C2GO75747 1445 aa26.81■■□□□ 1.88
CDK4-202ENST00000312990 NRXN3Q9Y4C0 1643 aa26.79■■□□□ 1.88
CDK4-202ENST00000312990 VGFO15240 615 aaPredicted RBP26.79■■□□□ 1.88
CDK4-202ENST00000312990 IQGAP1P46940 1657 aa26.79■■□□□ 1.88
CDK4-202ENST00000312990 RALGAPBQ86X10 1494 aa26.77■■□□□ 1.88
CDK4-202ENST00000312990 SETD1AO15047 1707 aaKnown RBP26.76■■□□□ 1.88
CDK4-202ENST00000312990 LTKP29376 864 aa26.76■■□□□ 1.87
CDK4-202ENST00000312990 LAMC1P11047 1609 aa26.76■■□□□ 1.87
CDK4-202ENST00000312990 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.76■■□□□ 1.87
CDK4-202ENST00000312990 SCAF11Q99590 1463 aaKnown RBP26.75■■□□□ 1.87
CDK4-202ENST00000312990 SETBP1Q9Y6X0 1596 aa26.74■■□□□ 1.87
CDK4-202ENST00000312990 HDGFP51858 240 aaKnown RBP26.72■■□□□ 1.87
CDK4-202ENST00000312990 TXNDC2Q86VQ3 553 aa26.72■■□□□ 1.87
CDK4-202ENST00000312990 ALKQ9UM73 1620 aa26.7■■□□□ 1.87
CDK4-202ENST00000312990 EID1Q9Y6B2 187 aa26.7■■□□□ 1.87
CDK4-202ENST00000312990 PLEKHG1Q9ULL1 1385 aa26.69■■□□□ 1.86
CDK4-202ENST00000312990 SENP3Q9H4L4 574 aaPredicted RBP26.68■■□□□ 1.86
CDK4-202ENST00000312990 CFAP70Q5T0N1 1121 aa26.67■■□□□ 1.86
CDK4-202ENST00000312990 STRCQ7RTU9 1775 aa26.67■■□□□ 1.86
CDK4-202ENST00000312990 HSPA2P54652 639 aa26.66■■□□□ 1.86
CDK4-202ENST00000312990 ADGRB1O14514 1584 aa26.66■■□□□ 1.86
CDK4-202ENST00000312990 ASXL1Q8IXJ9 1541 aa26.66■■□□□ 1.86
CDK4-202ENST00000312990 NBPF1Q3BBV0 1214 aa26.66■■□□□ 1.86
CDK4-202ENST00000312990 ANKLE2Q86XL3 938 aa26.66■■□□□ 1.86
CDK4-202ENST00000312990 C14orf93Q9H972 538 aaKnown RBP26.66■■□□□ 1.86
CDK4-202ENST00000312990 ROCK2O75116 1388 aaKnown RBP26.65■■□□□ 1.86
CDK4-202ENST00000312990 GPRASP1Q5JY77 1395 aa26.65■■□□□ 1.86
CDK4-202ENST00000312990 ADAMTS13Q76LX8 1427 aa26.64■■□□□ 1.86
CDK4-202ENST00000312990 MED14O60244 1454 aa26.64■■□□□ 1.85
CDK4-202ENST00000312990 DIP2AQ14689 1571 aa26.61■■□□□ 1.85
CDK4-202ENST00000312990 NCKAP5LQ9HCH0 1330 aa26.6■■□□□ 1.85
CDK4-202ENST00000312990 NPHP4O75161 1426 aaPredicted RBP26.58■■□□□ 1.85
CDK4-202ENST00000312990 CARD11Q9BXL7 1154 aa26.57■■□□□ 1.84
CDK4-202ENST00000312990 BCANQ96GW7 911 aa26.56■■□□□ 1.84
CDK4-202ENST00000312990 TMEM132EQ6IEE7 984 aa26.55■■□□□ 1.84
CDK4-202ENST00000312990 ARHGEF28Q8N1W1 1705 aaKnown RBP26.54■■□□□ 1.84
CDK4-202ENST00000312990 METP08581 1390 aa26.54■■□□□ 1.84
CDK4-202ENST00000312990 SLC26A8Q96RN1 970 aa26.54■■□□□ 1.84
CDK4-202ENST00000312990 KNDC1Q76NI1 1749 aa26.52■■□□□ 1.84
CDK4-202ENST00000312990 CHD2O14647 1828 aaKnown RBP26.52■■□□□ 1.84
CDK4-202ENST00000312990 USP47Q96K76 1375 aa26.51■■□□□ 1.83
CDK4-202ENST00000312990 TBX22Q9Y458 520 aa26.5■■□□□ 1.83
CDK4-202ENST00000312990 YTHDC2Q9H6S0 1430 aaKnown RBP26.49■■□□□ 1.83
CDK4-202ENST00000312990 XRN1Q8IZH2 1706 aaKnown RBP26.47■■□□□ 1.83
CDK4-202ENST00000312990 PTPRUQ92729 1446 aa26.46■■□□□ 1.83
CDK4-202ENST00000312990 EIF4G2P78344 907 aaKnown RBP eCLIP26.45■■□□□ 1.82
CDK4-202ENST00000312990 LRPPRCP42704 1394 aaKnown RBP26.45■■□□□ 1.82
CDK4-202ENST00000312990 HSPA5P11021 654 aaKnown RBP26.44■■□□□ 1.82
CDK4-202ENST00000312990 CPS1P31327 1500 aa26.43■■□□□ 1.82
CDK4-202ENST00000312990 PIK3R4Q99570 1358 aa26.43■■□□□ 1.82
CDK4-202ENST00000312990 DLC1Q96QB1 1528 aa26.42■■□□□ 1.82
CDK4-202ENST00000312990 QRICH2Q9H0J4 1663 aa26.42■■□□□ 1.82
CDK4-202ENST00000312990 TRAK1Q9UPV9 953 aa26.42■■□□□ 1.82
CDK4-202ENST00000312990 TECPR2O15040 1411 aa26.42■■□□□ 1.82
CDK4-202ENST00000312990 AEBP2Q6ZN18 517 aaPredicted RBP26.41■■□□□ 1.82
CDK4-202ENST00000312990 HIRIP3Q9BW71 556 aaPredicted RBP26.41■■□□□ 1.82
CDK4-202ENST00000312990 STK26Q9P289 416 aa26.41■■□□□ 1.82
CDK4-202ENST00000312990 ABCC11Q96J66 1382 aa26.41■■□□□ 1.82
CDK4-202ENST00000312990 STRCP1A6NGW2 1772 aa26.4■■□□□ 1.82
CDK4-202ENST00000312990 NWD1Q149M9 1564 aa26.39■■□□□ 1.82
CDK4-202ENST00000312990 EIF3AQ14152 1382 aaKnown RBP26.39■■□□□ 1.82
CDK4-202ENST00000312990 ST20-MTHFSA0A0A6YYL1 179 aa26.38■■□□□ 1.81
CDK4-202ENST00000312990 AMOTL2Q9Y2J4 779 aa26.34■■□□□ 1.81
CDK4-202ENST00000312990 PTCH1Q13635 1447 aa26.34■■□□□ 1.81
CDK4-202ENST00000312990 ROBO2Q9HCK4 1378 aa26.33■■□□□ 1.81
CDK4-202ENST00000312990 CENPJQ9HC77 1338 aaPredicted RBP26.32■■□□□ 1.8
CDK4-202ENST00000312990 FAM135BQ49AJ0 1406 aa26.32■■□□□ 1.8
CDK4-202ENST00000312990 TESK2Q96S53 571 aa26.31■■□□□ 1.8
CDK4-202ENST00000312990 PLEKHH1Q9ULM0 1364 aa26.31■■□□□ 1.8
CDK4-202ENST00000312990 KCNA6P17658 529 aa26.3■■□□□ 1.8
CDK4-202ENST00000312990 PRAM1Q96QH2 718 aa26.3■■□□□ 1.8
CDK4-202ENST00000312990 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.29■■□□□ 1.8
CDK4-202ENST00000312990 SBNO2Q9Y2G9 1366 aa26.29■■□□□ 1.8
CDK4-202ENST00000312990 SIRT1Q96EB6 747 aa26.28■■□□□ 1.8
CDK4-202ENST00000312990 WAPLQ7Z5K2 1190 aa26.28■■□□□ 1.8
CDK4-202ENST00000312990 DMRT2Q9Y5R5 561 aa26.28■■□□□ 1.8
CDK4-202ENST00000312990 ZNF316A6NFI3 1004 aaPredicted RBP26.26■■□□□ 1.79
CDK4-202ENST00000312990 NKTRP30414 1462 aaKnown RBP26.26■■□□□ 1.79
CDK4-202ENST00000312990 SAFB2Q14151 953 aaKnown RBP eCLIP26.25■■□□□ 1.79
CDK4-202ENST00000312990 POGKQ9P215 609 aa26.25■■□□□ 1.79
CDK4-202ENST00000312990 NALCNQ8IZF0 1738 aa26.24■■□□□ 1.79
CDK4-202ENST00000312990 XIRP1Q702N8 1843 aaKnown RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms