RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 NEXMIFQ5QGS0 1516 aa32.3■■■□□ 2.76
CCDC85B-201ENST00000312579 LMTK3Q96Q04 1460 aa32.3■■■□□ 2.76
CCDC85B-201ENST00000312579 HSPA2P54652 639 aa32.28■■■□□ 2.76
CCDC85B-201ENST00000312579 SENP3Q9H4L4 574 aaPredicted RBP32.28■■■□□ 2.76
CCDC85B-201ENST00000312579 RPGRIP1LQ68CZ1 1315 aa32.27■■■□□ 2.76
CCDC85B-201ENST00000312579 ZFYVE9O95405 1425 aa32.26■■■□□ 2.76
CCDC85B-201ENST00000312579 PPLO60437 1756 aa32.26■■■□□ 2.76
CCDC85B-201ENST00000312579 IFT172Q9UG01 1749 aa32.26■■■□□ 2.75
CCDC85B-201ENST00000312579 LTKP29376 864 aa32.25■■■□□ 2.75
CCDC85B-201ENST00000312579 TIMELESSQ9UNS1 1208 aa32.25■■■□□ 2.75
CCDC85B-201ENST00000312579 ADGRF5Q8IZF2 1346 aa32.24■■■□□ 2.75
CCDC85B-201ENST00000312579 ARHGAP23Q9P227 1491 aa32.23■■■□□ 2.75
CCDC85B-201ENST00000312579 SLIT1O75093 1534 aa32.23■■■□□ 2.75
CCDC85B-201ENST00000312579 TXNDC2Q86VQ3 553 aa32.21■■■□□ 2.75
CCDC85B-201ENST00000312579 PPP1R15AO75807 674 aaPredicted RBP32.2■■■□□ 2.74
CCDC85B-201ENST00000312579 VGFO15240 615 aaPredicted RBP32.17■■■□□ 2.74
CCDC85B-201ENST00000312579 NBPF8Q3BBV2 869 aa32.17■■■□□ 2.74
CCDC85B-201ENST00000312579 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.17■■■□□ 2.74
CCDC85B-201ENST00000312579 EID1Q9Y6B2 187 aa32.17■■■□□ 2.74
CCDC85B-201ENST00000312579 MYOM2P54296 1465 aa32.17■■■□□ 2.74
CCDC85B-201ENST00000312579 NCKAP5LQ9HCH0 1330 aa32.15■■■□□ 2.74
CCDC85B-201ENST00000312579 HDGFP51858 240 aaKnown RBP32.15■■■□□ 2.74
CCDC85B-201ENST00000312579 SCAF11Q99590 1463 aaKnown RBP32.14■■■□□ 2.74
CCDC85B-201ENST00000312579 ANKLE2Q86XL3 938 aa32.14■■■□□ 2.74
CCDC85B-201ENST00000312579 PRAG1Q86YV5 1406 aa32.12■■■□□ 2.73
CCDC85B-201ENST00000312579 NRXN1Q9ULB1 1477 aa32.11■■■□□ 2.73
CCDC85B-201ENST00000312579 STAC3Q96MF2 364 aa32.1■■■□□ 2.73
CCDC85B-201ENST00000312579 BCANQ96GW7 911 aa32.09■■■□□ 2.73
CCDC85B-201ENST00000312579 PIK3C2GO75747 1445 aa32.08■■■□□ 2.73
CCDC85B-201ENST00000312579 PLEKHG1Q9ULL1 1385 aa32.06■■■□□ 2.72
CCDC85B-201ENST00000312579 CFAP70Q5T0N1 1121 aa32.05■■■□□ 2.72
CCDC85B-201ENST00000312579 POLR1AO95602 1720 aaPredicted RBP32.04■■■□□ 2.72
CCDC85B-201ENST00000312579 NRXN3Q9Y4C0 1643 aa32.02■■■□□ 2.72
CCDC85B-201ENST00000312579 IQGAP1P46940 1657 aa32.02■■■□□ 2.72
CCDC85B-201ENST00000312579 SLC26A8Q96RN1 970 aa32■■■□□ 2.71
CCDC85B-201ENST00000312579 STRCQ7RTU9 1775 aa32■■■□□ 2.71
CCDC85B-201ENST00000312579 NBPF1Q3BBV0 1214 aa32■■■□□ 2.71
CCDC85B-201ENST00000312579 NPHP4O75161 1426 aaPredicted RBP31.99■■■□□ 2.71
CCDC85B-201ENST00000312579 C14orf93Q9H972 538 aaKnown RBP31.99■■■□□ 2.71
CCDC85B-201ENST00000312579 SETBP1Q9Y6X0 1596 aa31.99■■■□□ 2.71
CCDC85B-201ENST00000312579 ADAMTS13Q76LX8 1427 aa31.98■■■□□ 2.71
CCDC85B-201ENST00000312579 ALKQ9UM73 1620 aa31.97■■■□□ 2.71
CCDC85B-201ENST00000312579 TRPM1Q7Z4N2 1603 aa31.97■■■□□ 2.71
CCDC85B-201ENST00000312579 MED14O60244 1454 aa31.97■■■□□ 2.71
CCDC85B-201ENST00000312579 TMEM132EQ6IEE7 984 aa31.95■■■□□ 2.7
CCDC85B-201ENST00000312579 RALGAPBQ86X10 1494 aa31.92■■■□□ 2.7
CCDC85B-201ENST00000312579 SETD1AO15047 1707 aaKnown RBP31.91■■■□□ 2.7
CCDC85B-201ENST00000312579 ROCK2O75116 1388 aaKnown RBP31.9■■■□□ 2.7
CCDC85B-201ENST00000312579 METP08581 1390 aa31.9■■■□□ 2.7
CCDC85B-201ENST00000312579 ASXL1Q8IXJ9 1541 aa31.9■■■□□ 2.7
CCDC85B-201ENST00000312579 KIAA1210Q9ULL0 1709 aa31.89■■■□□ 2.7
CCDC85B-201ENST00000312579 LAMC1P11047 1609 aa31.87■■■□□ 2.69
CCDC85B-201ENST00000312579 TBX22Q9Y458 520 aa31.87■■■□□ 2.69
CCDC85B-201ENST00000312579 ADGRB1O14514 1584 aa31.86■■■□□ 2.69
CCDC85B-201ENST00000312579 CARD11Q9BXL7 1154 aa31.84■■■□□ 2.69
CCDC85B-201ENST00000312579 DIP2AQ14689 1571 aa31.82■■■□□ 2.69
CCDC85B-201ENST00000312579 STK26Q9P289 416 aa31.82■■■□□ 2.68
CCDC85B-201ENST00000312579 GPRASP1Q5JY77 1395 aa31.81■■■□□ 2.68
CCDC85B-201ENST00000312579 PTPRUQ92729 1446 aa31.8■■■□□ 2.68
CCDC85B-201ENST00000312579 TRAK1Q9UPV9 953 aa31.77■■■□□ 2.68
CCDC85B-201ENST00000312579 YTHDC2Q9H6S0 1430 aaKnown RBP31.77■■■□□ 2.68
CCDC85B-201ENST00000312579 LRPPRCP42704 1394 aaKnown RBP31.73■■■□□ 2.67
CCDC85B-201ENST00000312579 AMOTL2Q9Y2J4 779 aa31.73■■■□□ 2.67
CCDC85B-201ENST00000312579 DMRT2Q9Y5R5 561 aa31.73■■■□□ 2.67
CCDC85B-201ENST00000312579 PIK3R4Q99570 1358 aa31.7■■■□□ 2.67
CCDC85B-201ENST00000312579 USP47Q96K76 1375 aa31.69■■■□□ 2.66
CCDC85B-201ENST00000312579 KCNA6P17658 529 aa31.69■■■□□ 2.66
CCDC85B-201ENST00000312579 CHD2O14647 1828 aaKnown RBP31.68■■■□□ 2.66
CCDC85B-201ENST00000312579 HIRIP3Q9BW71 556 aaPredicted RBP31.68■■■□□ 2.66
CCDC85B-201ENST00000312579 ABCC11Q96J66 1382 aa31.67■■■□□ 2.66
CCDC85B-201ENST00000312579 ZNF335Q9H4Z2 1342 aaPredicted RBP31.65■■■□□ 2.66
CCDC85B-201ENST00000312579 ROBO2Q9HCK4 1378 aa31.65■■■□□ 2.66
CCDC85B-201ENST00000312579 XRN1Q8IZH2 1706 aaKnown RBP31.65■■■□□ 2.66
CCDC85B-201ENST00000312579 HSPA5P11021 654 aaKnown RBP31.65■■■□□ 2.66
CCDC85B-201ENST00000312579 WAPLQ7Z5K2 1190 aa31.65■■■□□ 2.66
CCDC85B-201ENST00000312579 STRCP1A6NGW2 1772 aa31.63■■■□□ 2.65
CCDC85B-201ENST00000312579 PLEKHH1Q9ULM0 1364 aa31.62■■■□□ 2.65
CCDC85B-201ENST00000312579 ARHGEF28Q8N1W1 1705 aaKnown RBP31.62■■■□□ 2.65
CCDC85B-201ENST00000312579 TECPR2O15040 1411 aa31.62■■■□□ 2.65
CCDC85B-201ENST00000312579 EIF4G2P78344 907 aaKnown RBP eCLIP31.62■■■□□ 2.65
CCDC85B-201ENST00000312579 SAFB2Q14151 953 aaKnown RBP eCLIP31.62■■■□□ 2.65
CCDC85B-201ENST00000312579 PRAM1Q96QH2 718 aa31.62■■■□□ 2.65
CCDC85B-201ENST00000312579 KNDC1Q76NI1 1749 aa31.61■■■□□ 2.65
CCDC85B-201ENST00000312579 ST20-MTHFSA0A0A6YYL1 179 aa31.61■■■□□ 2.65
CCDC85B-201ENST00000312579 NWD1Q149M9 1564 aa31.61■■■□□ 2.65
CCDC85B-201ENST00000312579 RBM33Q96EV2 1170 aaKnown RBP31.6■■■□□ 2.65
CCDC85B-201ENST00000312579 CPS1P31327 1500 aa31.59■■■□□ 2.65
CCDC85B-201ENST00000312579 DLC1Q96QB1 1528 aa31.59■■■□□ 2.65
CCDC85B-201ENST00000312579 POGKQ9P215 609 aa31.58■■■□□ 2.65
CCDC85B-201ENST00000312579 EIF3AQ14152 1382 aaKnown RBP31.57■■■□□ 2.64
CCDC85B-201ENST00000312579 PTCH1Q13635 1447 aa31.55■■■□□ 2.64
CCDC85B-201ENST00000312579 CENPJQ9HC77 1338 aaPredicted RBP31.55■■■□□ 2.64
CCDC85B-201ENST00000312579 SIRT1Q96EB6 747 aa31.53■■■□□ 2.64
CCDC85B-201ENST00000312579 FAM135BQ49AJ0 1406 aa31.52■■■□□ 2.64
CCDC85B-201ENST00000312579 PROSER2Q86WR7 435 aaPredicted RBP31.52■■■□□ 2.64
CCDC85B-201ENST00000312579 MINK1Q8N4C8 1332 aaPredicted RBP31.5■■■□□ 2.63
CCDC85B-201ENST00000312579 QRICH2Q9H0J4 1663 aa31.5■■■□□ 2.63
CCDC85B-201ENST00000312579 NKTRP30414 1462 aaKnown RBP31.5■■■□□ 2.63
CCDC85B-201ENST00000312579 TESK2Q96S53 571 aa31.49■■■□□ 2.63
CCDC85B-201ENST00000312579 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms