RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 PPP1R15AO75807 674 aaPredicted RBP25.58■■□□□ 1.69
SWSAP1-201ENST00000312423 DHX57Q6P158 1386 aaKnown RBP25.58■■□□□ 1.69
SWSAP1-201ENST00000312423 HDGFP51858 240 aaKnown RBP25.58■■□□□ 1.68
SWSAP1-201ENST00000312423 NUTM2DQ5VT03 806 aaPredicted RBP25.57■■□□□ 1.68
SWSAP1-201ENST00000312423 NPHP4O75161 1426 aaPredicted RBP25.57■■□□□ 1.68
SWSAP1-201ENST00000312423 ZFYVE9O95405 1425 aa25.57■■□□□ 1.68
SWSAP1-201ENST00000312423 IQGAP1P46940 1657 aa25.56■■□□□ 1.68
SWSAP1-201ENST00000312423 RGL3Q3MIN7 710 aa25.55■■□□□ 1.68
SWSAP1-201ENST00000312423 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.55■■□□□ 1.68
SWSAP1-201ENST00000312423 MED14O60244 1454 aa25.54■■□□□ 1.68
SWSAP1-201ENST00000312423 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
SWSAP1-201ENST00000312423 BCANQ96GW7 911 aa25.53■■□□□ 1.68
SWSAP1-201ENST00000312423 SPATA31E1Q6ZUB1 1445 aa25.51■■□□□ 1.67
SWSAP1-201ENST00000312423 NEXMIFQ5QGS0 1516 aa25.51■■□□□ 1.67
SWSAP1-201ENST00000312423 PPLO60437 1756 aa25.47■■□□□ 1.67
SWSAP1-201ENST00000312423 RPGRIP1LQ68CZ1 1315 aa25.47■■□□□ 1.67
SWSAP1-201ENST00000312423 PLEKHG1Q9ULL1 1385 aa25.47■■□□□ 1.67
SWSAP1-201ENST00000312423 IFT172Q9UG01 1749 aa25.42■■□□□ 1.66
SWSAP1-201ENST00000312423 VGFO15240 615 aaPredicted RBP25.42■■□□□ 1.66
SWSAP1-201ENST00000312423 SLC26A8Q96RN1 970 aa25.42■■□□□ 1.66
SWSAP1-201ENST00000312423 SIN3AQ96ST3 1273 aa25.41■■□□□ 1.66
SWSAP1-201ENST00000312423 NEUROD1Q13562 356 aa25.4■■□□□ 1.66
SWSAP1-201ENST00000312423 ZNF335Q9H4Z2 1342 aaPredicted RBP25.38■■□□□ 1.65
SWSAP1-201ENST00000312423 SETBP1Q9Y6X0 1596 aa25.36■■□□□ 1.65
SWSAP1-201ENST00000312423 NRXN3Q9Y4C0 1643 aa25.35■■□□□ 1.65
SWSAP1-201ENST00000312423 DIP2AQ14689 1571 aa25.35■■□□□ 1.65
SWSAP1-201ENST00000312423 ADGRF5Q8IZF2 1346 aa25.34■■□□□ 1.65
SWSAP1-201ENST00000312423 ADAMTS13Q76LX8 1427 aa25.34■■□□□ 1.65
SWSAP1-201ENST00000312423 DCAF11Q8TEB1 546 aa25.34■■□□□ 1.65
SWSAP1-201ENST00000312423 KDM2AQ9Y2K7 1162 aa25.33■■□□□ 1.65
SWSAP1-201ENST00000312423 MYOM2P54296 1465 aa25.32■■□□□ 1.64
SWSAP1-201ENST00000312423 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
SWSAP1-201ENST00000312423 TBX22Q9Y458 520 aa25.31■■□□□ 1.64
SWSAP1-201ENST00000312423 LTBP4Q8N2S1 1624 aa25.28■■□□□ 1.64
SWSAP1-201ENST00000312423 ALKQ9UM73 1620 aa25.28■■□□□ 1.64
SWSAP1-201ENST00000312423 STRCP1A6NGW2 1772 aa25.27■■□□□ 1.64
SWSAP1-201ENST00000312423 PIK3C2GO75747 1445 aa25.27■■□□□ 1.64
SWSAP1-201ENST00000312423 CPS1P31327 1500 aa25.25■■□□□ 1.63
SWSAP1-201ENST00000312423 CHD2O14647 1828 aaKnown RBP25.24■■□□□ 1.63
SWSAP1-201ENST00000312423 NRXN1Q9ULB1 1477 aa25.24■■□□□ 1.63
SWSAP1-201ENST00000312423 SETD1AO15047 1707 aaKnown RBP25.24■■□□□ 1.63
SWSAP1-201ENST00000312423 KCNA6P17658 529 aa25.23■■□□□ 1.63
SWSAP1-201ENST00000312423 L3MBTL2Q969R5 705 aa25.23■■□□□ 1.63
SWSAP1-201ENST00000312423 TONSLQ96HA7 1378 aa25.23■■□□□ 1.63
SWSAP1-201ENST00000312423 STAC3Q96MF2 364 aa25.23■■□□□ 1.63
SWSAP1-201ENST00000312423 METP08581 1390 aa25.23■■□□□ 1.63
SWSAP1-201ENST00000312423 PIK3R4Q99570 1358 aa25.23■■□□□ 1.63
SWSAP1-201ENST00000312423 NWD1Q149M9 1564 aa25.22■■□□□ 1.63
SWSAP1-201ENST00000312423 CLSPNQ9HAW4 1339 aa25.22■■□□□ 1.63
SWSAP1-201ENST00000312423 LAMC1P11047 1609 aa25.2■■□□□ 1.63
SWSAP1-201ENST00000312423 CERKQ8TCT0 537 aa25.19■■□□□ 1.62
SWSAP1-201ENST00000312423 CFAP70Q5T0N1 1121 aa25.18■■□□□ 1.62
SWSAP1-201ENST00000312423 AMOTL2Q9Y2J4 779 aa25.18■■□□□ 1.62
SWSAP1-201ENST00000312423 PTPRUQ92729 1446 aa25.18■■□□□ 1.62
SWSAP1-201ENST00000312423 NKTRP30414 1462 aaKnown RBP25.17■■□□□ 1.62
SWSAP1-201ENST00000312423 C14orf93Q9H972 538 aaKnown RBP25.17■■□□□ 1.62
SWSAP1-201ENST00000312423 PROSER2Q86WR7 435 aaPredicted RBP25.16■■□□□ 1.62
SWSAP1-201ENST00000312423 LRRC7Q96NW7 1537 aa25.15■■□□□ 1.62
SWSAP1-201ENST00000312423 XRN1Q8IZH2 1706 aaKnown RBP25.15■■□□□ 1.62
SWSAP1-201ENST00000312423 TMEM132EQ6IEE7 984 aa25.14■■□□□ 1.62
SWSAP1-201ENST00000312423 PRAG1Q86YV5 1406 aa25.13■■□□□ 1.61
SWSAP1-201ENST00000312423 ASXL1Q8IXJ9 1541 aa25.13■■□□□ 1.61
SWSAP1-201ENST00000312423 RBM33Q96EV2 1170 aaKnown RBP25.12■■□□□ 1.61
SWSAP1-201ENST00000312423 STK26Q9P289 416 aa25.11■■□□□ 1.61
SWSAP1-201ENST00000312423 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
SWSAP1-201ENST00000312423 IQSEC2Q5JU85 1478 aa25.08■■□□□ 1.61
SWSAP1-201ENST00000312423 XIRP1Q702N8 1843 aaKnown RBP25.08■■□□□ 1.61
SWSAP1-201ENST00000312423 KIAA1210Q9ULL0 1709 aa25.08■■□□□ 1.6
SWSAP1-201ENST00000312423 YTHDC2Q9H6S0 1430 aaKnown RBP25.07■■□□□ 1.6
SWSAP1-201ENST00000312423 C14orf37Q86TY3 774 aa25.07■■□□□ 1.6
SWSAP1-201ENST00000312423 LRPPRCP42704 1394 aaKnown RBP25.06■■□□□ 1.6
SWSAP1-201ENST00000312423 ADGRB1O14514 1584 aa25.05■■□□□ 1.6
SWSAP1-201ENST00000312423 PTCH1Q13635 1447 aa25.04■■□□□ 1.6
SWSAP1-201ENST00000312423 KNDC1Q76NI1 1749 aa25.04■■□□□ 1.6
SWSAP1-201ENST00000312423 ROBO2Q9HCK4 1378 aa25.04■■□□□ 1.6
SWSAP1-201ENST00000312423 TRPM1Q7Z4N2 1603 aa25.02■■□□□ 1.6
SWSAP1-201ENST00000312423 ABCC11Q96J66 1382 aa25.01■■□□□ 1.6
SWSAP1-201ENST00000312423 NBPF1Q3BBV0 1214 aa25.01■■□□□ 1.59
SWSAP1-201ENST00000312423 TECPR2O15040 1411 aa25■■□□□ 1.59
SWSAP1-201ENST00000312423 NBPF8Q3BBV2 869 aa25■■□□□ 1.59
SWSAP1-201ENST00000312423 TIMELESSQ9UNS1 1208 aa25■■□□□ 1.59
SWSAP1-201ENST00000312423 MSH6P52701 1360 aa24.99■■□□□ 1.59
SWSAP1-201ENST00000312423 TRAK1Q9UPV9 953 aa24.99■■□□□ 1.59
SWSAP1-201ENST00000312423 NCOA3Q9Y6Q9 1424 aa24.98■■□□□ 1.59
SWSAP1-201ENST00000312423 UBAP1LF5GYI3 381 aa24.97■■□□□ 1.59
SWSAP1-201ENST00000312423 ROCK2O75116 1388 aaKnown RBP24.97■■□□□ 1.59
SWSAP1-201ENST00000312423 WAPLQ7Z5K2 1190 aa24.96■■□□□ 1.59
SWSAP1-201ENST00000312423 NALCNQ8IZF0 1738 aa24.95■■□□□ 1.59
SWSAP1-201ENST00000312423 DLC1Q96QB1 1528 aa24.94■■□□□ 1.58
SWSAP1-201ENST00000312423 TOM1O60784 492 aa24.94■■□□□ 1.58
SWSAP1-201ENST00000312423 PRAM1Q96QH2 718 aa24.94■■□□□ 1.58
SWSAP1-201ENST00000312423 POGKQ9P215 609 aa24.94■■□□□ 1.58
SWSAP1-201ENST00000312423 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.94■■□□□ 1.58
SWSAP1-201ENST00000312423 FAM135BQ49AJ0 1406 aa24.93■■□□□ 1.58
SWSAP1-201ENST00000312423 PLEKHH1Q9ULM0 1364 aa24.93■■□□□ 1.58
SWSAP1-201ENST00000312423 SAFB2Q14151 953 aaKnown RBP eCLIP24.93■■□□□ 1.58
SWSAP1-201ENST00000312423 C19orf44Q9H6X5 657 aa24.93■■□□□ 1.58
SWSAP1-201ENST00000312423 ADGRL3Q9HAR2 1447 aa24.93■■□□□ 1.58
SWSAP1-201ENST00000312423 ARHGEF28Q8N1W1 1705 aaKnown RBP24.92■■□□□ 1.58
SWSAP1-201ENST00000312423 RALGAPBQ86X10 1494 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms