RNA–Protein interactions for RNA: ENST00000311191.10

LRCH1-201, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 4,710 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-201ENST00000311191 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
LRCH1-201ENST00000311191 NUTM2BA6NNL0 878 aaPredicted RBP23.17■■□□□ 1.3
LRCH1-201ENST00000311191 NUTM2EB1AL46 878 aaPredicted RBP23.17■■□□□ 1.3
LRCH1-201ENST00000311191 IDI1Q13907 227 aa23.17■■□□□ 1.3
LRCH1-201ENST00000311191 CFAP70Q5T0N1 1121 aa23.17■■□□□ 1.3
LRCH1-201ENST00000311191 NUTM2AQ8IVF1 878 aaPredicted RBP23.17■■□□□ 1.3
LRCH1-201ENST00000311191 TMEM132EQ6IEE7 984 aa23.17■■□□□ 1.3
LRCH1-201ENST00000311191 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
LRCH1-201ENST00000311191 ZMYM3Q14202 1370 aa23.15■■□□□ 1.3
LRCH1-201ENST00000311191 ABTB2Q8N961 1025 aa23.15■■□□□ 1.3
LRCH1-201ENST00000311191 TRAPPC8Q9Y2L5 1435 aa23.13■■□□□ 1.29
LRCH1-201ENST00000311191 AMOTL2Q9Y2J4 779 aa23.13■■□□□ 1.29
LRCH1-201ENST00000311191 WASHC2AQ641Q2 1341 aa23.13■■□□□ 1.29
LRCH1-201ENST00000311191 USP47Q96K76 1375 aa23.13■■□□□ 1.29
LRCH1-201ENST00000311191 ATAD2Q6PL18 1390 aa23.1■■□□□ 1.29
LRCH1-201ENST00000311191 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
LRCH1-201ENST00000311191 NLRP2Q9NX02 1062 aa23.09■■□□□ 1.29
LRCH1-201ENST00000311191 MAPKBP1O60336 1514 aa23.09■■□□□ 1.29
LRCH1-201ENST00000311191 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
LRCH1-201ENST00000311191 GOLGA2Q08379 1002 aa23.08■■□□□ 1.29
LRCH1-201ENST00000311191 SHANK2Q9UPX8 1470 aa23.07■■□□□ 1.28
LRCH1-201ENST00000311191 FTSJ3Q8IY81 847 aaKnown RBP23.06■■□□□ 1.28
LRCH1-201ENST00000311191 TTC5Q8N0Z6 440 aa23.06■■□□□ 1.28
LRCH1-201ENST00000311191 MSH5O43196 834 aa23.06■■□□□ 1.28
LRCH1-201ENST00000311191 TEFQ10587 303 aa23.06■■□□□ 1.28
LRCH1-201ENST00000311191 SAMD9Q5K651 1589 aa23.05■■□□□ 1.28
LRCH1-201ENST00000311191 KCNH5Q8NCM2 988 aa23.05■■□□□ 1.28
LRCH1-201ENST00000311191 ABCA8O94911 1581 aa23.05■■□□□ 1.28
LRCH1-201ENST00000311191 STK31Q9BXU1 1019 aa23.05■■□□□ 1.28
LRCH1-201ENST00000311191 ZNF330Q9Y3S2 320 aaPredicted RBP23.04■■□□□ 1.28
LRCH1-201ENST00000311191 GTF2E1P29083 439 aaPredicted RBP23.04■■□□□ 1.28
LRCH1-201ENST00000311191 LMTK3Q96Q04 1460 aa23.04■■□□□ 1.28
LRCH1-201ENST00000311191 HSPA2P54652 639 aa23.03■■□□□ 1.28
LRCH1-201ENST00000311191 EIF5BO60841 1220 aaKnown RBP23.03■■□□□ 1.28
LRCH1-201ENST00000311191 CDK19Q9BWU1 502 aa23.03■■□□□ 1.28
LRCH1-201ENST00000311191 NAIPQ13075 1403 aa23.02■■□□□ 1.28
LRCH1-201ENST00000311191 CCDC61Q9Y6R9 512 aa23.02■■□□□ 1.28
LRCH1-201ENST00000311191 KDM6BO15054 1643 aa23.01■■□□□ 1.27
LRCH1-201ENST00000311191 CABP2Q9NPB3 220 aa23.01■■□□□ 1.27
LRCH1-201ENST00000311191 PDE3BQ13370 1112 aa23■■□□□ 1.27
LRCH1-201ENST00000311191 PMFBP1Q8TBY8 1022 aa23■■□□□ 1.27
LRCH1-201ENST00000311191 ATP7AQ04656 1500 aa23■■□□□ 1.27
LRCH1-201ENST00000311191 MAGI3Q5TCQ9 1506 aa23■■□□□ 1.27
LRCH1-201ENST00000311191 PANK3Q9H999 370 aa23■■□□□ 1.27
LRCH1-201ENST00000311191 PHF8Q9UPP1 1060 aa22.99■■□□□ 1.27
LRCH1-201ENST00000311191 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
LRCH1-201ENST00000311191 NGLY1Q96IV0 654 aa22.98■■□□□ 1.27
LRCH1-201ENST00000311191 SYTL4Q96C24 671 aaPredicted RBP22.97■■□□□ 1.27
LRCH1-201ENST00000311191 RIMS2Q9UQ26 1411 aa22.97■■□□□ 1.27
LRCH1-201ENST00000311191 STRN4Q9NRL3 753 aa22.96■■□□□ 1.27
LRCH1-201ENST00000311191 IPO8O15397 1037 aaKnown RBP22.96■■□□□ 1.27
LRCH1-201ENST00000311191 DIAPH1O60610 1272 aaKnown RBP22.96■■□□□ 1.27
LRCH1-201ENST00000311191 RIMBP3CA6NJZ7 1639 aa22.95■■□□□ 1.27
LRCH1-201ENST00000311191 RIMBP3BA6NNM3 1639 aa22.95■■□□□ 1.27
LRCH1-201ENST00000311191 RIMBP3Q9UFD9 1639 aa22.95■■□□□ 1.27
LRCH1-201ENST00000311191 NPHP3Q7Z494 1330 aa22.95■■□□□ 1.27
LRCH1-201ENST00000311191 TATP17735 454 aaPredicted RBP22.95■■□□□ 1.26
LRCH1-201ENST00000311191 TOM1L2Q6ZVM7 507 aa22.95■■□□□ 1.26
LRCH1-201ENST00000311191 C19orf44Q9H6X5 657 aa22.95■■□□□ 1.26
LRCH1-201ENST00000311191 UPF2Q9HAU5 1272 aaKnown RBP22.94■■□□□ 1.26
LRCH1-201ENST00000311191 TBX22Q9Y458 520 aa22.94■■□□□ 1.26
LRCH1-201ENST00000311191 NCKAP5LQ9HCH0 1330 aa22.93■■□□□ 1.26
LRCH1-201ENST00000311191 OS9Q13438 667 aaPredicted RBP22.93■■□□□ 1.26
LRCH1-201ENST00000311191 NUDT16Q96DE0 195 aaKnown RBP22.91■■□□□ 1.26
LRCH1-201ENST00000311191 G3V3G9 751 aa22.91■■□□□ 1.26
LRCH1-201ENST00000311191 PLEKHO1Q53GL0 409 aaPredicted RBP22.91■■□□□ 1.26
LRCH1-201ENST00000311191 DCAF8Q5TAQ9 597 aa22.91■■□□□ 1.26
LRCH1-201ENST00000311191 ZCCHC11Q5TAX3 1644 aaKnown RBP22.89■■□□□ 1.26
LRCH1-201ENST00000311191 NGEFQ8N5V2 710 aa22.89■■□□□ 1.25
LRCH1-201ENST00000311191 HSP90AB1P08238 724 aaKnown RBP22.89■■□□□ 1.25
LRCH1-201ENST00000311191 NUTM2GQ5VZR2 741 aa22.89■■□□□ 1.25
LRCH1-201ENST00000311191 TCOF1Q13428 1488 aaKnown RBP22.88■■□□□ 1.25
LRCH1-201ENST00000311191 KCNA6P17658 529 aa22.87■■□□□ 1.25
LRCH1-201ENST00000311191 MYO5CQ9NQX4 1742 aa22.86■■□□□ 1.25
LRCH1-201ENST00000311191 SPG7Q9UQ90 795 aa22.86■■□□□ 1.25
LRCH1-201ENST00000311191 MLH3Q9UHC1 1453 aa22.86■■□□□ 1.25
LRCH1-201ENST00000311191 LRRC59Q96AG4 307 aaKnown RBP22.86■■□□□ 1.25
LRCH1-201ENST00000311191 CABP1Q9NZU7 370 aa22.85■■□□□ 1.25
LRCH1-201ENST00000311191 CCER2I3L3R5 266 aa22.85■■□□□ 1.25
LRCH1-201ENST00000311191 KRT28Q7Z3Y7 464 aa22.84■■□□□ 1.25
LRCH1-201ENST00000311191 USP35Q9P2H5 1018 aa22.84■■□□□ 1.25
LRCH1-201ENST00000311191 C14orf93Q9H972 538 aaKnown RBP22.83■■□□□ 1.25
LRCH1-201ENST00000311191 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.83■■□□□ 1.259e-7■■■□□ 17.5
LRCH1-201ENST00000311191 WASLO00401 505 aaPredicted RBP22.83■■□□□ 1.25
LRCH1-201ENST00000311191 HSP90B1P14625 803 aaKnown RBP22.83■■□□□ 1.24
LRCH1-201ENST00000311191 NOS1P29475 1434 aa22.83■■□□□ 1.24
LRCH1-201ENST00000311191 GAS2L2Q8NHY3 880 aa22.82■■□□□ 1.24
LRCH1-201ENST00000311191 TAF7LQ5H9L4 462 aa22.82■■□□□ 1.24
LRCH1-201ENST00000311191 MYBBP1AQ9BQG0 1328 aaKnown RBP22.81■■□□□ 1.24
LRCH1-201ENST00000311191 CFAP43Q8NDM7 1665 aa22.81■■□□□ 1.24
LRCH1-201ENST00000311191 ADAMTS2O95450 1211 aa22.8■■□□□ 1.24
LRCH1-201ENST00000311191 TSPOAP1O95153 1857 aa22.8■■□□□ 1.24
LRCH1-201ENST00000311191 ARAP3Q8WWN8 1544 aa22.79■■□□□ 1.24
LRCH1-201ENST00000311191 FOXO3O43524 673 aa22.79■■□□□ 1.24
LRCH1-201ENST00000311191 GGNBP2Q9H3C7 697 aa22.78■■□□□ 1.24
LRCH1-201ENST00000311191 CASC1Q6TDU7 716 aa22.77■■□□□ 1.24
LRCH1-201ENST00000311191 NINLQ9Y2I6 1382 aa22.76■■□□□ 1.23
LRCH1-201ENST00000311191 WAPLQ7Z5K2 1190 aa22.76■■□□□ 1.23
LRCH1-201ENST00000311191 DDX58O95786 925 aaKnown RBP22.75■■□□□ 1.23
LRCH1-201ENST00000311191 NEXNQ0ZGT2 675 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms