RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CCDC141Q6ZP82 1450 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 E9PSI1 815 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 ERICH2A1L162 156 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 XBP1P17861 261 aa3.93□□□□□ -1.78
CLOCK-201ENST00000309964 REC8O95072 547 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 ZKSCAN1P17029 563 aaPredicted RBP3.92□□□□□ -1.78
CLOCK-201ENST00000309964 TPM1P09493 284 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 WWC2Q6AWC2 1192 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 ANKRD20A12PQ8NF67 263 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 PNISRQ8TF01 805 aaKnown RBP3.92□□□□□ -1.78
CLOCK-201ENST00000309964 C9orf78Q9NZ63 289 aaPredicted RBP3.92□□□□□ -1.78
CLOCK-201ENST00000309964 TOPBP1Q92547 1522 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 CLSTN1O94985 981 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 CNTLNQ9NXG0 1405 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 ANKRD50Q9ULJ7 1429 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 MYBBP1AQ9BQG0 1328 aaKnown RBP3.92□□□□□ -1.78
CLOCK-201ENST00000309964 CFAP65Q6ZU64 1925 aaKnown RBP3.92□□□□□ -1.78
CLOCK-201ENST00000309964 GAS2L2Q8NHY3 880 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 RBM33Q96EV2 1170 aaKnown RBP3.92□□□□□ -1.78
CLOCK-201ENST00000309964 PHF23Q9BUL5 403 aaPredicted RBP3.92□□□□□ -1.78
CLOCK-201ENST00000309964 KIAA0586Q9BVV6 1533 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 SOX12O15370 315 aa3.92□□□□□ -1.78
CLOCK-201ENST00000309964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 MARCH6O60337 910 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 SLC3A2P08195 630 aaKnown RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 RDXP35241 583 aaKnown RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 GOLGA6L1Q8N7Z2 621 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 ZNF330Q9Y3S2 320 aaPredicted RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 CENPJQ9HC77 1338 aaPredicted RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 HIP1O00291 1037 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 MSNP26038 577 aaKnown RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 DHX8Q14562 1220 aaKnown RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 RASSF8Q8NHQ8 419 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 TRIM21P19474 475 aaKnown RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 SAFB2Q14151 953 aaKnown RBP eCLIP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 DNAI2Q9GZS0 605 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 KCNH5Q8NCM2 988 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 API5Q9BZZ5 524 aaKnown RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 ERC2O15083 957 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 CT47B1P0C2W7 299 aaPredicted RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 TRIM29Q14134 588 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 ZNF287Q9HBT7 754 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 DDX19BQ9UMR2 479 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 R3HCC1Q9Y3T6 440 aaKnown RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 PRG4Q92954 1404 aaPredicted RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 GNAI1P63096 354 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 CCDC70Q6NSX1 233 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 RCAN3Q9UKA8 241 aa3.91□□□□□ -1.78
CLOCK-201ENST00000309964 IPO7O95373 1038 aaKnown RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 CWC22Q9HCG8 908 aaKnown RBP3.91□□□□□ -1.78
CLOCK-201ENST00000309964 THOC2Q8NI27 1593 aaKnown RBP3.9□□□□□ -1.78
CLOCK-201ENST00000309964 CCDC43Q96MW1 224 aaKnown RBP3.9□□□□□ -1.78
CLOCK-201ENST00000309964 TROQ12816 1431 aaPredicted RBP3.9□□□□□ -1.78
CLOCK-201ENST00000309964 TRIM6-TRIM34B2RNG4 842 aa3.9□□□□□ -1.78
CLOCK-201ENST00000309964 C11orf95C9JLR9 678 aaPredicted RBP3.9□□□□□ -1.78
CLOCK-201ENST00000309964 BRMS1Q9HCU9 246 aa3.9□□□□□ -1.78
CLOCK-201ENST00000309964 FGD6Q6ZV73 1430 aa3.9□□□□□ -1.79
CLOCK-201ENST00000309964 ITPRIPQ8IWB1 547 aa3.9□□□□□ -1.79
CLOCK-201ENST00000309964 CFAP74Q9C0B2 1584 aa3.9□□□□□ -1.79
CLOCK-201ENST00000309964 SART3Q15020 963 aaKnown RBP3.9□□□□□ -1.79
CLOCK-201ENST00000309964 GNL3LQ9NVN8 582 aaKnown RBP3.9□□□□□ -1.79
CLOCK-201ENST00000309964 DIAPH1O60610 1272 aaKnown RBP3.9□□□□□ -1.79
CLOCK-201ENST00000309964 LRRC9Q6ZRR7 1453 aa3.9□□□□□ -1.79
CLOCK-201ENST00000309964 IGF1RP08069 1367 aa3.9□□□□□ -1.79
CLOCK-201ENST00000309964 KIF6Q6ZMV9 814 aa3.9□□□□□ -1.79
CLOCK-201ENST00000309964 NOC3LQ8WTT2 800 aaKnown RBP3.9□□□□□ -1.79
CLOCK-201ENST00000309964 ZNF652Q9Y2D9 606 aa3.9□□□□□ -1.79
CLOCK-201ENST00000309964 PLB1Q6P1J6 1458 aa3.9□□□□□ -1.79
CLOCK-201ENST00000309964 ATAD2Q6PL18 1390 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 PLEKHO1Q53GL0 409 aaPredicted RBP3.89□□□□□ -1.79
CLOCK-201ENST00000309964 DRC7Q8IY82 874 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 DHX37Q8IY37 1157 aaKnown RBP3.89□□□□□ -1.79
CLOCK-201ENST00000309964 MAP3K1Q13233 1512 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 SF3A1Q15459 793 aaKnown RBP3.89□□□□□ -1.79
CLOCK-201ENST00000309964 ERC1Q8IUD2 1116 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 FAM184AQ8NB25 1140 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 NINLQ9Y2I6 1382 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 DHX16O60231 1041 aaKnown RBP3.89□□□□□ -1.79
CLOCK-201ENST00000309964 CCAR1Q8IX12 1150 aaKnown RBP3.89□□□□□ -1.79
CLOCK-201ENST00000309964 POLA1P09884 1462 aaPredicted RBP3.89□□□□□ -1.79
CLOCK-201ENST00000309964 ABCA10Q8WWZ4 1543 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 SAFBQ15424 915 aaKnown RBP eCLIP3.89□□□□□ -1.79
CLOCK-201ENST00000309964 TRAK1Q9UPV9 953 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 MSH5O43196 834 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 TXNDC2Q86VQ3 553 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 AQRO60306 1485 aaKnown RBP eCLIP3.89□□□□□ -1.79
CLOCK-201ENST00000309964 USP47Q96K76 1375 aa3.89□□□□□ -1.79
CLOCK-201ENST00000309964 MCM2P49736 904 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 SKOR2Q2VWA4 1001 aaPredicted RBP3.88□□□□□ -1.79
CLOCK-201ENST00000309964 ZKSCAN2Q63HK3 967 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 ZSCAN25Q6NSZ9 544 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 SUPT16HQ9Y5B9 1047 aaKnown RBP3.88□□□□□ -1.79
CLOCK-201ENST00000309964 NESP48681 1621 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 TULP1O00294 542 aaPredicted RBP3.88□□□□□ -1.79
CLOCK-201ENST00000309964 L3MBTL2Q969R5 705 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 SPG7Q9UQ90 795 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 BIVM-ERCC5R4GMW8 1640 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 G3BP1Q13283 466 aaKnown RBP eCLIP3.88□□□□□ -1.79
CLOCK-201ENST00000309964 CCDC30Q5VVM6 783 aa3.88□□□□□ -1.79
CLOCK-201ENST00000309964 TBC1D2BQ9UPU7 963 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms