RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 UNC13BO14795 1591 aa18.89■□□□□ 0.61
TPT1-201ENST00000309246 RPRD2Q5VT52 1461 aaKnown RBP18.88■□□□□ 0.61
TPT1-201ENST00000309246 SLC26A8Q96RN1 970 aa18.87■□□□□ 0.61
TPT1-201ENST00000309246 NWD1Q149M9 1564 aa18.86■□□□□ 0.61
TPT1-201ENST00000309246 E9PCH4 1651 aa18.85■□□□□ 0.61
TPT1-201ENST00000309246 TMEM94Q12767 1356 aa18.85■□□□□ 0.61
TPT1-201ENST00000309246 NCBP3Q53F19 620 aaKnown RBP18.85■□□□□ 0.61
TPT1-201ENST00000309246 SLC52A1Q9NWF4 448 aa18.84■□□□□ 0.61
TPT1-201ENST00000309246 TMEM131LA2VDJ0 1609 aa18.84■□□□□ 0.61
TPT1-201ENST00000309246 KCNA6P17658 529 aa18.83■□□□□ 0.6
TPT1-201ENST00000309246 CHD2O14647 1828 aaKnown RBP18.83■□□□□ 0.6
TPT1-201ENST00000309246 ROBO1Q9Y6N7 1651 aa18.82■□□□□ 0.6
TPT1-201ENST00000309246 NKTRP30414 1462 aaKnown RBP18.82■□□□□ 0.6
TPT1-201ENST00000309246 ZFYVE9O95405 1425 aa18.82■□□□□ 0.6
TPT1-201ENST00000309246 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
TPT1-201ENST00000309246 CNKSR2Q8WXI2 1034 aa18.81■□□□□ 0.6
TPT1-201ENST00000309246 RBM33Q96EV2 1170 aaKnown RBP18.81■□□□□ 0.6
TPT1-201ENST00000309246 BCANQ96GW7 911 aa18.81■□□□□ 0.6
TPT1-201ENST00000309246 PROSER2Q86WR7 435 aaPredicted RBP18.8■□□□□ 0.6
TPT1-201ENST00000309246 RIMS2Q9UQ26 1411 aa18.8■□□□□ 0.6
TPT1-201ENST00000309246 FAM135BQ49AJ0 1406 aa18.79■□□□□ 0.6
TPT1-201ENST00000309246 PLEKHG1Q9ULL1 1385 aa18.78■□□□□ 0.6
TPT1-201ENST00000309246 ROCK1Q13464 1354 aa18.77■□□□□ 0.6
TPT1-201ENST00000309246 PPP1R15AO75807 674 aaPredicted RBP18.76■□□□□ 0.59
TPT1-201ENST00000309246 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
TPT1-201ENST00000309246 MSH6P52701 1360 aa18.73■□□□□ 0.59
TPT1-201ENST00000309246 PHLPP1O60346 1717 aa18.73■□□□□ 0.59
TPT1-201ENST00000309246 ITGAEP38570 1179 aa18.72■□□□□ 0.59
TPT1-201ENST00000309246 HDGFP51858 240 aaKnown RBP18.71■□□□□ 0.59
TPT1-201ENST00000309246 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.59
TPT1-201ENST00000309246 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
TPT1-201ENST00000309246 DIP2AQ14689 1571 aa18.7■□□□□ 0.58
TPT1-201ENST00000309246 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
TPT1-201ENST00000309246 NUP155O75694 1391 aa18.69■□□□□ 0.58
TPT1-201ENST00000309246 ADAMTS13Q76LX8 1427 aa18.69■□□□□ 0.58
TPT1-201ENST00000309246 RGS17Q9UGC6 210 aaPredicted RBP18.69■□□□□ 0.58
TPT1-201ENST00000309246 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.68■□□□□ 0.58
TPT1-201ENST00000309246 TBX22Q9Y458 520 aa18.68■□□□□ 0.58
TPT1-201ENST00000309246 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.67■□□□□ 0.58
TPT1-201ENST00000309246 KCNA4P22459 653 aa18.66■□□□□ 0.58
TPT1-201ENST00000309246 TRPM2O94759 1503 aa18.65■□□□□ 0.58
TPT1-201ENST00000309246 SLAIN2Q9P270 581 aa18.65■□□□□ 0.58
TPT1-201ENST00000309246 COL16A1Q07092 1604 aaPredicted RBP18.64■□□□□ 0.57
TPT1-201ENST00000309246 NRXN3Q9Y4C0 1643 aa18.64■□□□□ 0.57
TPT1-201ENST00000309246 C14orf37Q86TY3 774 aa18.62■□□□□ 0.57
TPT1-201ENST00000309246 NCOA3Q9Y6Q9 1424 aa18.62■□□□□ 0.57
TPT1-201ENST00000309246 PIK3R4Q99570 1358 aa18.61■□□□□ 0.57
TPT1-201ENST00000309246 XRN1Q8IZH2 1706 aaKnown RBP18.6■□□□□ 0.57
TPT1-201ENST00000309246 PTPRUQ92729 1446 aa18.6■□□□□ 0.57
TPT1-201ENST00000309246 CLTCL1P53675 1640 aa18.6■□□□□ 0.57
TPT1-201ENST00000309246 POTEAQ6S8J7 498 aa18.59■□□□□ 0.57
TPT1-201ENST00000309246 SETBP1Q9Y6X0 1596 aa18.59■□□□□ 0.57
TPT1-201ENST00000309246 KIF1BO60333 1816 aa18.58■□□□□ 0.57
TPT1-201ENST00000309246 JCADQ9P266 1359 aa18.58■□□□□ 0.57
TPT1-201ENST00000309246 AHDC1Q5TGY3 1603 aaPredicted RBP18.57■□□□□ 0.56
TPT1-201ENST00000309246 SETD1AO15047 1707 aaKnown RBP18.57■□□□□ 0.56
TPT1-201ENST00000309246 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
TPT1-201ENST00000309246 SHPRHQ149N8 1683 aa18.55■□□□□ 0.56
TPT1-201ENST00000309246 ZNF326Q5BKZ1 582 aaKnown RBP18.55■□□□□ 0.56
TPT1-201ENST00000309246 CADPS2Q86UW7 1296 aa18.55■□□□□ 0.56
TPT1-201ENST00000309246 C19orf44Q9H6X5 657 aa18.55■□□□□ 0.56
TPT1-201ENST00000309246 NEXMIFQ5QGS0 1516 aa18.54■□□□□ 0.56
TPT1-201ENST00000309246 ATF3P18847 181 aa18.54■□□□□ 0.56
TPT1-201ENST00000309246 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
TPT1-201ENST00000309246 LRP6O75581 1613 aa18.53■□□□□ 0.56
TPT1-201ENST00000309246 NAIPQ13075 1403 aa18.52■□□□□ 0.56
TPT1-201ENST00000309246 NALCNQ8IZF0 1738 aa18.51■□□□□ 0.55
TPT1-201ENST00000309246 DCCP43146 1447 aa18.5■□□□□ 0.55
TPT1-201ENST00000309246 METP08581 1390 aa18.5■□□□□ 0.55
TPT1-201ENST00000309246 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
TPT1-201ENST00000309246 ASXL1Q8IXJ9 1541 aa18.49■□□□□ 0.55
TPT1-201ENST00000309246 BRINP3Q76B58 766 aa18.48■□□□□ 0.55
TPT1-201ENST00000309246 SPATA31A6Q5VVP1 1343 aa18.48■□□□□ 0.55
TPT1-201ENST00000309246 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
TPT1-201ENST00000309246 MST1RQ04912 1400 aa18.47■□□□□ 0.55
TPT1-201ENST00000309246 MEX3CQ5U5Q3 659 aaKnown RBP18.46■□□□□ 0.55
TPT1-201ENST00000309246 ADGRL3Q9HAR2 1447 aa18.45■□□□□ 0.54
TPT1-201ENST00000309246 PPLO60437 1756 aa18.45■□□□□ 0.54
TPT1-201ENST00000309246 NPM3O75607 178 aaKnown RBP18.44■□□□□ 0.54
TPT1-201ENST00000309246 HFM1A2PYH4 1435 aa18.43■□□□□ 0.54
TPT1-201ENST00000309246 TRIM52Q96A61 297 aa18.43■□□□□ 0.54
TPT1-201ENST00000309246 NUTM2BA6NNL0 878 aaPredicted RBP18.4■□□□□ 0.54
TPT1-201ENST00000309246 NUTM2EB1AL46 878 aaPredicted RBP18.4■□□□□ 0.54
TPT1-201ENST00000309246 HOXD11P31277 338 aaPredicted RBP18.4■□□□□ 0.54
TPT1-201ENST00000309246 NUTM2AQ8IVF1 878 aaPredicted RBP18.4■□□□□ 0.54
TPT1-201ENST00000309246 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
TPT1-201ENST00000309246 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
TPT1-201ENST00000309246 DDX17Q92841 729 aaKnown RBP18.38■□□□□ 0.53
TPT1-201ENST00000309246 PTCH1Q13635 1447 aa18.38■□□□□ 0.53
TPT1-201ENST00000309246 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
TPT1-201ENST00000309246 LAMC1P11047 1609 aa18.35■□□□□ 0.53
TPT1-201ENST00000309246 C1orf167Q5SNV9 1468 aa18.35■□□□□ 0.53
TPT1-201ENST00000309246 ROBO2Q9HCK4 1378 aa18.35■□□□□ 0.53
TPT1-201ENST00000309246 VGFO15240 615 aaPredicted RBP18.35■□□□□ 0.53
TPT1-201ENST00000309246 PNPLA6Q8IY17 1366 aa18.33■□□□□ 0.53
TPT1-201ENST00000309246 IFT172Q9UG01 1749 aa18.33■□□□□ 0.52
TPT1-201ENST00000309246 LRRC59Q96AG4 307 aaKnown RBP18.33■□□□□ 0.52
TPT1-201ENST00000309246 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
TPT1-201ENST00000309246 AFF2P51816 1311 aa18.32■□□□□ 0.52
TPT1-201ENST00000309246 RPGRIP1LQ68CZ1 1315 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms