RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 MED14O60244 1454 aa32.45■■■□□ 2.79
SNUPN-201ENST00000308588 DHX57Q6P158 1386 aaKnown RBP32.44■■■□□ 2.78
SNUPN-201ENST00000308588 ZNF326Q5BKZ1 582 aaKnown RBP32.42■■■□□ 2.78
SNUPN-201ENST00000308588 NPHP4O75161 1426 aaPredicted RBP32.41■■■□□ 2.78
SNUPN-201ENST00000308588 SPATA31E1Q6ZUB1 1445 aa32.4■■■□□ 2.78
SNUPN-201ENST00000308588 HDGFP51858 240 aaKnown RBP32.4■■■□□ 2.78
SNUPN-201ENST00000308588 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.38■■■□□ 2.77
SNUPN-201ENST00000308588 NUTM2DQ5VT03 806 aaPredicted RBP32.37■■■□□ 2.77
SNUPN-201ENST00000308588 IQGAP1P46940 1657 aa32.35■■■□□ 2.77
SNUPN-201ENST00000308588 NEXMIFQ5QGS0 1516 aa32.34■■■□□ 2.77
SNUPN-201ENST00000308588 PPP1R15AO75807 674 aaPredicted RBP32.34■■■□□ 2.77
SNUPN-201ENST00000308588 RGL3Q3MIN7 710 aa32.34■■■□□ 2.77
SNUPN-201ENST00000308588 RPGRIP1LQ68CZ1 1315 aa32.32■■■□□ 2.76
SNUPN-201ENST00000308588 PLEKHG1Q9ULL1 1385 aa32.31■■■□□ 2.76
SNUPN-201ENST00000308588 SENP3Q9H4L4 574 aaPredicted RBP32.27■■■□□ 2.76
SNUPN-201ENST00000308588 BCANQ96GW7 911 aa32.24■■■□□ 2.75
SNUPN-201ENST00000308588 PPLO60437 1756 aa32.24■■■□□ 2.75
SNUPN-201ENST00000308588 VGFO15240 615 aaPredicted RBP32.23■■■□□ 2.75
SNUPN-201ENST00000308588 SLC26A8Q96RN1 970 aa32.23■■■□□ 2.75
SNUPN-201ENST00000308588 SIN3AQ96ST3 1273 aa32.21■■■□□ 2.75
SNUPN-201ENST00000308588 ZNF335Q9H4Z2 1342 aaPredicted RBP32.2■■■□□ 2.75
SNUPN-201ENST00000308588 IFT172Q9UG01 1749 aa32.19■■■□□ 2.74
SNUPN-201ENST00000308588 ADAMTS13Q76LX8 1427 aa32.19■■■□□ 2.74
SNUPN-201ENST00000308588 SETBP1Q9Y6X0 1596 aa32.16■■■□□ 2.74
SNUPN-201ENST00000308588 ADGRF5Q8IZF2 1346 aa32.16■■■□□ 2.74
SNUPN-201ENST00000308588 TBX22Q9Y458 520 aa32.16■■■□□ 2.74
SNUPN-201ENST00000308588 NRXN3Q9Y4C0 1643 aa32.15■■■□□ 2.74
SNUPN-201ENST00000308588 LTBP4Q8N2S1 1624 aa32.13■■■□□ 2.73
SNUPN-201ENST00000308588 NEUROD1Q13562 356 aa32.12■■■□□ 2.73
SNUPN-201ENST00000308588 DCAF11Q8TEB1 546 aa32.1■■■□□ 2.73
SNUPN-201ENST00000308588 DIP2AQ14689 1571 aa32.09■■■□□ 2.73
SNUPN-201ENST00000308588 MYOM2P54296 1465 aa32.09■■■□□ 2.73
SNUPN-201ENST00000308588 NRXN1Q9ULB1 1477 aa32.06■■■□□ 2.72
SNUPN-201ENST00000308588 STRCP1A6NGW2 1772 aa32.06■■■□□ 2.72
SNUPN-201ENST00000308588 KDM2AQ9Y2K7 1162 aa32.05■■■□□ 2.72
SNUPN-201ENST00000308588 PIK3C2GO75747 1445 aa32.05■■■□□ 2.72
SNUPN-201ENST00000308588 STAC3Q96MF2 364 aa32.05■■■□□ 2.72
SNUPN-201ENST00000308588 KCNA6P17658 529 aa32.04■■■□□ 2.72
SNUPN-201ENST00000308588 ALKQ9UM73 1620 aa32.03■■■□□ 2.72
SNUPN-201ENST00000308588 METP08581 1390 aa32.03■■■□□ 2.72
SNUPN-201ENST00000308588 PIK3R4Q99570 1358 aa32.03■■■□□ 2.72
SNUPN-201ENST00000308588 L3MBTL2Q969R5 705 aa32.01■■■□□ 2.72
SNUPN-201ENST00000308588 CPS1P31327 1500 aa32■■■□□ 2.71
SNUPN-201ENST00000308588 SETD1AO15047 1707 aaKnown RBP32■■■□□ 2.71
SNUPN-201ENST00000308588 CHD2O14647 1828 aaKnown RBP32■■■□□ 2.71
SNUPN-201ENST00000308588 PTPRUQ92729 1446 aa31.99■■■□□ 2.71
SNUPN-201ENST00000308588 NWD1Q149M9 1564 aa31.98■■■□□ 2.71
SNUPN-201ENST00000308588 CERKQ8TCT0 537 aa31.98■■■□□ 2.71
SNUPN-201ENST00000308588 CLSPNQ9HAW4 1339 aa31.98■■■□□ 2.71
SNUPN-201ENST00000308588 C14orf93Q9H972 538 aaKnown RBP31.96■■■□□ 2.71
SNUPN-201ENST00000308588 CCER1Q8TC90 406 aaPredicted RBP31.95■■■□□ 2.71
SNUPN-201ENST00000308588 CFAP70Q5T0N1 1121 aa31.94■■■□□ 2.7
SNUPN-201ENST00000308588 AMOTL2Q9Y2J4 779 aa31.94■■■□□ 2.7
SNUPN-201ENST00000308588 LRRC7Q96NW7 1537 aa31.92■■■□□ 2.7
SNUPN-201ENST00000308588 NKTRP30414 1462 aaKnown RBP31.91■■■□□ 2.7
SNUPN-201ENST00000308588 TMEM132EQ6IEE7 984 aa31.88■■■□□ 2.69
SNUPN-201ENST00000308588 TONSLQ96HA7 1378 aa31.88■■■□□ 2.69
SNUPN-201ENST00000308588 ASXL1Q8IXJ9 1541 aa31.87■■■□□ 2.69
SNUPN-201ENST00000308588 XRN1Q8IZH2 1706 aaKnown RBP31.87■■■□□ 2.69
SNUPN-201ENST00000308588 PROSER2Q86WR7 435 aaPredicted RBP31.87■■■□□ 2.69
SNUPN-201ENST00000308588 PRAG1Q86YV5 1406 aa31.87■■■□□ 2.69
SNUPN-201ENST00000308588 LAMC1P11047 1609 aa31.86■■■□□ 2.69
SNUPN-201ENST00000308588 IQSEC2Q5JU85 1478 aa31.84■■■□□ 2.69
SNUPN-201ENST00000308588 RBM33Q96EV2 1170 aaKnown RBP31.84■■■□□ 2.69
SNUPN-201ENST00000308588 TMEM94Q12767 1356 aa31.83■■■□□ 2.69
SNUPN-201ENST00000308588 LRPPRCP42704 1394 aaKnown RBP31.8■■■□□ 2.68
SNUPN-201ENST00000308588 XIRP1Q702N8 1843 aaKnown RBP31.8■■■□□ 2.68
SNUPN-201ENST00000308588 ADGRB1O14514 1584 aa31.79■■■□□ 2.68
SNUPN-201ENST00000308588 YTHDC2Q9H6S0 1430 aaKnown RBP31.79■■■□□ 2.68
SNUPN-201ENST00000308588 STK26Q9P289 416 aa31.78■■■□□ 2.68
SNUPN-201ENST00000308588 ABCC11Q96J66 1382 aa31.77■■■□□ 2.68
SNUPN-201ENST00000308588 ROBO2Q9HCK4 1378 aa31.77■■■□□ 2.68
SNUPN-201ENST00000308588 PTCH1Q13635 1447 aa31.76■■■□□ 2.67
SNUPN-201ENST00000308588 TECPR2O15040 1411 aa31.75■■■□□ 2.67
SNUPN-201ENST00000308588 NBPF8Q3BBV2 869 aa31.75■■■□□ 2.67
SNUPN-201ENST00000308588 KIAA1210Q9ULL0 1709 aa31.74■■■□□ 2.67
SNUPN-201ENST00000308588 NBPF1Q3BBV0 1214 aa31.74■■■□□ 2.67
SNUPN-201ENST00000308588 NCOA3Q9Y6Q9 1424 aa31.73■■■□□ 2.67
SNUPN-201ENST00000308588 TIMELESSQ9UNS1 1208 aa31.73■■■□□ 2.67
SNUPN-201ENST00000308588 KNDC1Q76NI1 1749 aa31.7■■■□□ 2.66
SNUPN-201ENST00000308588 TRPM1Q7Z4N2 1603 aa31.67■■■□□ 2.66
SNUPN-201ENST00000308588 SIRT1Q96EB6 747 aa31.67■■■□□ 2.66
SNUPN-201ENST00000308588 WAPLQ7Z5K2 1190 aa31.66■■■□□ 2.66
SNUPN-201ENST00000308588 C14orf37Q86TY3 774 aa31.65■■■□□ 2.66
SNUPN-201ENST00000308588 TRAK1Q9UPV9 953 aa31.65■■■□□ 2.66
SNUPN-201ENST00000308588 MSH6P52701 1360 aa31.65■■■□□ 2.66
SNUPN-201ENST00000308588 C19orf44Q9H6X5 657 aa31.65■■■□□ 2.66
SNUPN-201ENST00000308588 PLEKHH1Q9ULM0 1364 aa31.64■■■□□ 2.66
SNUPN-201ENST00000308588 UBAP1LF5GYI3 381 aa31.64■■■□□ 2.66
SNUPN-201ENST00000308588 FAM135BQ49AJ0 1406 aa31.64■■■□□ 2.65
SNUPN-201ENST00000308588 DLC1Q96QB1 1528 aa31.63■■■□□ 2.65
SNUPN-201ENST00000308588 FBXO41Q8TF61 875 aa31.62■■■□□ 2.65
SNUPN-201ENST00000308588 ADGRL3Q9HAR2 1447 aa31.61■■■□□ 2.65
SNUPN-201ENST00000308588 TOM1O60784 492 aa31.6■■■□□ 2.65
SNUPN-201ENST00000308588 PRAM1Q96QH2 718 aa31.59■■■□□ 2.65
SNUPN-201ENST00000308588 ROCK2O75116 1388 aaKnown RBP31.59■■■□□ 2.65
SNUPN-201ENST00000308588 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.58■■■□□ 2.65
SNUPN-201ENST00000308588 NALCNQ8IZF0 1738 aa31.57■■■□□ 2.64
SNUPN-201ENST00000308588 RALGAPBQ86X10 1494 aa31.56■■■□□ 2.64
SNUPN-201ENST00000308588 GPRASP1Q5JY77 1395 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms