RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ARHGAP23Q9P227 1491 aa39.19■■■■□ 3.86
HDAC3-201ENST00000305264 RIMS2Q9UQ26 1411 aa39.18■■■■□ 3.86
HDAC3-201ENST00000305264 RPGRIP1LQ68CZ1 1315 aa39.15■■■■□ 3.86
HDAC3-201ENST00000305264 DCAF11Q8TEB1 546 aa39.15■■■■□ 3.86
HDAC3-201ENST00000305264 NUTM2DQ5VT03 806 aaPredicted RBP39.14■■■■□ 3.86
HDAC3-201ENST00000305264 TIMELESSQ9UNS1 1208 aa39.12■■■■□ 3.85
HDAC3-201ENST00000305264 KDM2AQ9Y2K7 1162 aa39.1■■■■□ 3.85
HDAC3-201ENST00000305264 MYOM2P54296 1465 aa39.1■■■■□ 3.85
HDAC3-201ENST00000305264 HSPA2P54652 639 aa39.1■■■■□ 3.85
HDAC3-201ENST00000305264 LTKP29376 864 aa39.06■■■■□ 3.84
HDAC3-201ENST00000305264 ADGRF5Q8IZF2 1346 aa39.04■■■■□ 3.84
HDAC3-201ENST00000305264 SCAF11Q99590 1463 aaKnown RBP39.04■■■■□ 3.84
HDAC3-201ENST00000305264 POLR1AO95602 1720 aaPredicted RBP39.04■■■■□ 3.84
HDAC3-201ENST00000305264 NRXN1Q9ULB1 1477 aa39.02■■■■□ 3.84
HDAC3-201ENST00000305264 TXNDC2Q86VQ3 553 aa39.02■■■■□ 3.84
HDAC3-201ENST00000305264 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.02■■■■□ 3.84
HDAC3-201ENST00000305264 VGFO15240 615 aaPredicted RBP39.01■■■■□ 3.83
HDAC3-201ENST00000305264 PPP1R15AO75807 674 aaPredicted RBP39.01■■■■□ 3.83
HDAC3-201ENST00000305264 EID1Q9Y6B2 187 aa39.01■■■■□ 3.83
HDAC3-201ENST00000305264 AEBP2Q6ZN18 517 aaPredicted RBP39■■■■□ 3.83
HDAC3-201ENST00000305264 PRAG1Q86YV5 1406 aa38.99■■■■□ 3.83
HDAC3-201ENST00000305264 HDGFP51858 240 aaKnown RBP38.99■■■■□ 3.83
HDAC3-201ENST00000305264 STAC3Q96MF2 364 aa38.97■■■■□ 3.83
HDAC3-201ENST00000305264 SENP3Q9H4L4 574 aaPredicted RBP38.97■■■■□ 3.83
HDAC3-201ENST00000305264 ANKLE2Q86XL3 938 aa38.97■■■■□ 3.83
HDAC3-201ENST00000305264 PIK3C2GO75747 1445 aa38.97■■■■□ 3.83
HDAC3-201ENST00000305264 NRXN3Q9Y4C0 1643 aa38.94■■■■□ 3.82
HDAC3-201ENST00000305264 IQGAP1P46940 1657 aa38.94■■■■□ 3.82
HDAC3-201ENST00000305264 PLEKHG1Q9ULL1 1385 aa38.92■■■■□ 3.82
HDAC3-201ENST00000305264 NBPF8Q3BBV2 869 aa38.92■■■■□ 3.82
HDAC3-201ENST00000305264 NCKAP5LQ9HCH0 1330 aa38.92■■■■□ 3.82
HDAC3-201ENST00000305264 STRCQ7RTU9 1775 aa38.92■■■■□ 3.82
HDAC3-201ENST00000305264 SETBP1Q9Y6X0 1596 aa38.91■■■■□ 3.82
HDAC3-201ENST00000305264 ZEB1P37275 1124 aaPredicted RBP38.89■■■■□ 3.82
HDAC3-201ENST00000305264 MED14O60244 1454 aa38.87■■■■□ 3.81
HDAC3-201ENST00000305264 TRPM1Q7Z4N2 1603 aa38.86■■■■□ 3.81
HDAC3-201ENST00000305264 NPHP4O75161 1426 aaPredicted RBP38.84■■■■□ 3.81
HDAC3-201ENST00000305264 SETD1AO15047 1707 aaKnown RBP38.84■■■■□ 3.81
HDAC3-201ENST00000305264 LAMC1P11047 1609 aa38.83■■■■□ 3.81
HDAC3-201ENST00000305264 ALKQ9UM73 1620 aa38.83■■■■□ 3.81
HDAC3-201ENST00000305264 ADAMTS13Q76LX8 1427 aa38.82■■■■□ 3.81
HDAC3-201ENST00000305264 BCANQ96GW7 911 aa38.82■■■■□ 3.8
HDAC3-201ENST00000305264 KIAA1210Q9ULL0 1709 aa38.82■■■■□ 3.8
HDAC3-201ENST00000305264 CFAP70Q5T0N1 1121 aa38.8■■■■□ 3.8
HDAC3-201ENST00000305264 RALGAPBQ86X10 1494 aa38.77■■■■□ 3.8
HDAC3-201ENST00000305264 C14orf93Q9H972 538 aaKnown RBP38.77■■■■□ 3.8
HDAC3-201ENST00000305264 ASXL1Q8IXJ9 1541 aa38.75■■■■□ 3.79
HDAC3-201ENST00000305264 SLC26A8Q96RN1 970 aa38.75■■■■□ 3.79
HDAC3-201ENST00000305264 DIP2AQ14689 1571 aa38.75■■■■□ 3.79
HDAC3-201ENST00000305264 NBPF1Q3BBV0 1214 aa38.71■■■■□ 3.79
HDAC3-201ENST00000305264 ADGRB1O14514 1584 aa38.71■■■■□ 3.79
HDAC3-201ENST00000305264 ROCK2O75116 1388 aaKnown RBP38.68■■■■□ 3.78
HDAC3-201ENST00000305264 METP08581 1390 aa38.67■■■■□ 3.78
HDAC3-201ENST00000305264 TMEM132EQ6IEE7 984 aa38.65■■■■□ 3.78
HDAC3-201ENST00000305264 TBX22Q9Y458 520 aa38.65■■■■□ 3.78
HDAC3-201ENST00000305264 GPRASP1Q5JY77 1395 aa38.63■■■■□ 3.77
HDAC3-201ENST00000305264 PTPRUQ92729 1446 aa38.56■■■■□ 3.76
HDAC3-201ENST00000305264 CARD11Q9BXL7 1154 aa38.56■■■■□ 3.76
HDAC3-201ENST00000305264 YTHDC2Q9H6S0 1430 aaKnown RBP38.55■■■■□ 3.76
HDAC3-201ENST00000305264 CHD2O14647 1828 aaKnown RBP38.54■■■■□ 3.76
HDAC3-201ENST00000305264 PIK3R4Q99570 1358 aa38.53■■■■□ 3.76
HDAC3-201ENST00000305264 DMRT2Q9Y5R5 561 aa38.52■■■■□ 3.76
HDAC3-201ENST00000305264 XRN1Q8IZH2 1706 aaKnown RBP38.51■■■■□ 3.76
HDAC3-201ENST00000305264 LRPPRCP42704 1394 aaKnown RBP38.5■■■■□ 3.75
HDAC3-201ENST00000305264 KNDC1Q76NI1 1749 aa38.5■■■■□ 3.75
HDAC3-201ENST00000305264 STK26Q9P289 416 aa38.5■■■■□ 3.75
HDAC3-201ENST00000305264 NWD1Q149M9 1564 aa38.47■■■■□ 3.75
HDAC3-201ENST00000305264 ARHGEF28Q8N1W1 1705 aaKnown RBP38.47■■■■□ 3.75
HDAC3-201ENST00000305264 STRCP1A6NGW2 1772 aa38.46■■■■□ 3.75
HDAC3-201ENST00000305264 TRAK1Q9UPV9 953 aa38.45■■■■□ 3.75
HDAC3-201ENST00000305264 AMOTL2Q9Y2J4 779 aa38.44■■■■□ 3.74
HDAC3-201ENST00000305264 CPS1P31327 1500 aa38.43■■■■□ 3.74
HDAC3-201ENST00000305264 TECPR2O15040 1411 aa38.43■■■■□ 3.74
HDAC3-201ENST00000305264 ABCC11Q96J66 1382 aa38.43■■■■□ 3.74
HDAC3-201ENST00000305264 USP47Q96K76 1375 aa38.43■■■■□ 3.74
HDAC3-201ENST00000305264 DLC1Q96QB1 1528 aa38.4■■■■□ 3.74
HDAC3-201ENST00000305264 KCNA6P17658 529 aa38.39■■■■□ 3.74
HDAC3-201ENST00000305264 ROBO2Q9HCK4 1378 aa38.38■■■■□ 3.73
HDAC3-201ENST00000305264 ZNF335Q9H4Z2 1342 aaPredicted RBP38.37■■■■□ 3.73
HDAC3-201ENST00000305264 PTCH1Q13635 1447 aa38.37■■■■□ 3.73
HDAC3-201ENST00000305264 EIF3AQ14152 1382 aaKnown RBP38.34■■■■□ 3.73
HDAC3-201ENST00000305264 NKTRP30414 1462 aaKnown RBP38.33■■■■□ 3.73
HDAC3-201ENST00000305264 PLEKHH1Q9ULM0 1364 aa38.31■■■■□ 3.72
HDAC3-201ENST00000305264 FAM135BQ49AJ0 1406 aa38.3■■■■□ 3.72
HDAC3-201ENST00000305264 EIF4G2P78344 907 aaKnown RBP eCLIP38.3■■■■□ 3.72
HDAC3-201ENST00000305264 PRAM1Q96QH2 718 aa38.3■■■■□ 3.72
HDAC3-201ENST00000305264 QRICH2Q9H0J4 1663 aa38.29■■■■□ 3.72
HDAC3-201ENST00000305264 HSPA5P11021 654 aaKnown RBP38.28■■■■□ 3.72
HDAC3-201ENST00000305264 WAPLQ7Z5K2 1190 aa38.28■■■■□ 3.72
HDAC3-201ENST00000305264 ST20-MTHFSA0A0A6YYL1 179 aa38.27■■■■□ 3.72
HDAC3-201ENST00000305264 CENPJQ9HC77 1338 aaPredicted RBP38.25■■■■□ 3.71
HDAC3-201ENST00000305264 SAFB2Q14151 953 aaKnown RBP eCLIP38.25■■■■□ 3.71
HDAC3-201ENST00000305264 SIRT1Q96EB6 747 aa38.25■■■■□ 3.71
HDAC3-201ENST00000305264 HIRIP3Q9BW71 556 aaPredicted RBP38.24■■■■□ 3.71
HDAC3-201ENST00000305264 POGKQ9P215 609 aa38.24■■■■□ 3.71
HDAC3-201ENST00000305264 RBM33Q96EV2 1170 aaKnown RBP38.2■■■■□ 3.71
HDAC3-201ENST00000305264 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.2■■■■□ 3.71
HDAC3-201ENST00000305264 LTBP4Q8N2S1 1624 aa38.19■■■■□ 3.7
HDAC3-201ENST00000305264 PROSER2Q86WR7 435 aaPredicted RBP38.18■■■■□ 3.7
HDAC3-201ENST00000305264 LRRC7Q96NW7 1537 aa38.16■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms