RNA–Protein interactions for RNA: ENST00000303927.3

CAVIN3-201, Transcript of caveolae associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN3, Length 1,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-201ENST00000303927 SENP3Q9H4L4 574 aaPredicted RBP30.16■■■□□ 2.42
CAVIN3-201ENST00000303927 SLC26A8Q96RN1 970 aa30.14■■■□□ 2.42
CAVIN3-201ENST00000303927 MYO5BQ9ULV0 1848 aa30.14■■■□□ 2.42
CAVIN3-201ENST00000303927 NUP155O75694 1391 aa30.13■■■□□ 2.41
CAVIN3-201ENST00000303927 NWD1Q149M9 1564 aa30.11■■■□□ 2.41
CAVIN3-201ENST00000303927 TMEM94Q12767 1356 aa30.11■■■□□ 2.41
CAVIN3-201ENST00000303927 ZFYVE9O95405 1425 aa30.11■■■□□ 2.41
CAVIN3-201ENST00000303927 TMEM131LA2VDJ0 1609 aa30.11■■■□□ 2.41
CAVIN3-201ENST00000303927 E9PCH4 1651 aa30.11■■■□□ 2.41
CAVIN3-201ENST00000303927 KCNA6P17658 529 aa30.1■■■□□ 2.41
CAVIN3-201ENST00000303927 NKTRP30414 1462 aaKnown RBP30.07■■■□□ 2.4
CAVIN3-201ENST00000303927 BCANQ96GW7 911 aa30.07■■■□□ 2.4
CAVIN3-201ENST00000303927 RIMS2Q9UQ26 1411 aa30.05■■■□□ 2.4
CAVIN3-201ENST00000303927 PLEKHG1Q9ULL1 1385 aa30.04■■■□□ 2.4
CAVIN3-201ENST00000303927 PROSER2Q86WR7 435 aaPredicted RBP30.03■■■□□ 2.4
CAVIN3-201ENST00000303927 PHF23Q9BUL5 403 aaPredicted RBP30.03■■■□□ 2.4
CAVIN3-201ENST00000303927 PPP1R15AO75807 674 aaPredicted RBP30.02■■■□□ 2.4
CAVIN3-201ENST00000303927 RBM33Q96EV2 1170 aaKnown RBP30.01■■■□□ 2.39
CAVIN3-201ENST00000303927 FAM135BQ49AJ0 1406 aa30.01■■■□□ 2.39
CAVIN3-201ENST00000303927 HDGFP51858 240 aaKnown RBP29.99■■■□□ 2.39
CAVIN3-201ENST00000303927 ROBO1Q9Y6N7 1651 aa29.98■■■□□ 2.39
CAVIN3-201ENST00000303927 CHGAP10645 457 aaKnown RBP29.98■■■□□ 2.39
CAVIN3-201ENST00000303927 CHD2O14647 1828 aaKnown RBP29.98■■■□□ 2.39
CAVIN3-201ENST00000303927 TRIM52Q96A61 297 aa29.94■■■□□ 2.38
CAVIN3-201ENST00000303927 MSH6P52701 1360 aa29.93■■■□□ 2.38
CAVIN3-201ENST00000303927 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.93■■■□□ 2.38
CAVIN3-201ENST00000303927 ACIN1Q9UKV3 1341 aaKnown RBP29.93■■■□□ 2.38
CAVIN3-201ENST00000303927 DIP2AQ14689 1571 aa29.91■■■□□ 2.38
CAVIN3-201ENST00000303927 SPHKAPQ2M3C7 1700 aa29.91■■■□□ 2.38
CAVIN3-201ENST00000303927 SETD5Q9C0A6 1442 aa29.9■■■□□ 2.38
CAVIN3-201ENST00000303927 TBX22Q9Y458 520 aa29.89■■■□□ 2.38
CAVIN3-201ENST00000303927 ADAMTS13Q76LX8 1427 aa29.88■■■□□ 2.37
CAVIN3-201ENST00000303927 NUTM2DQ5VT03 806 aaPredicted RBP29.88■■■□□ 2.37
CAVIN3-201ENST00000303927 SLC4A1APQ9BWU0 796 aaKnown RBP29.84■■■□□ 2.37
CAVIN3-201ENST00000303927 TRPM2O94759 1503 aa29.81■■■□□ 2.36
CAVIN3-201ENST00000303927 PIK3R4Q99570 1358 aa29.81■■■□□ 2.36
CAVIN3-201ENST00000303927 SLAIN2Q9P270 581 aa29.81■■■□□ 2.36
CAVIN3-201ENST00000303927 NCOA3Q9Y6Q9 1424 aa29.8■■■□□ 2.36
CAVIN3-201ENST00000303927 PHLPP1O60346 1717 aa29.8■■■□□ 2.36
CAVIN3-201ENST00000303927 RAB3GAP2Q9H2M9 1393 aa29.78■■■□□ 2.36
CAVIN3-201ENST00000303927 RGS17Q9UGC6 210 aaPredicted RBP29.77■■■□□ 2.36
CAVIN3-201ENST00000303927 NRXN3Q9Y4C0 1643 aa29.75■■■□□ 2.35
CAVIN3-201ENST00000303927 C14orf37Q86TY3 774 aa29.75■■■□□ 2.35
CAVIN3-201ENST00000303927 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.75■■■□□ 2.35
CAVIN3-201ENST00000303927 SETBP1Q9Y6X0 1596 aa29.74■■■□□ 2.35
CAVIN3-201ENST00000303927 PTPRUQ92729 1446 aa29.72■■■□□ 2.35
CAVIN3-201ENST00000303927 CLTCL1P53675 1640 aa29.72■■■□□ 2.35
CAVIN3-201ENST00000303927 MPHOSPH9Q99550 1183 aa29.71■■■□□ 2.35
CAVIN3-201ENST00000303927 KIF1BO60333 1816 aa29.71■■■□□ 2.35
CAVIN3-201ENST00000303927 COL16A1Q07092 1604 aaPredicted RBP29.71■■■□□ 2.35
CAVIN3-201ENST00000303927 ZNF326Q5BKZ1 582 aaKnown RBP29.7■■■□□ 2.35
CAVIN3-201ENST00000303927 XRN1Q8IZH2 1706 aaKnown RBP29.69■■■□□ 2.34
CAVIN3-201ENST00000303927 HRCP23327 699 aa29.69■■■□□ 2.34
CAVIN3-201ENST00000303927 AMOTL2Q9Y2J4 779 aa29.69■■■□□ 2.34
CAVIN3-201ENST00000303927 C19orf44Q9H6X5 657 aa29.68■■■□□ 2.34
CAVIN3-201ENST00000303927 JCADQ9P266 1359 aa29.67■■■□□ 2.34
CAVIN3-201ENST00000303927 CADPS2Q86UW7 1296 aa29.67■■■□□ 2.34
CAVIN3-201ENST00000303927 ATF3P18847 181 aa29.66■■■□□ 2.34
CAVIN3-201ENST00000303927 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
CAVIN3-201ENST00000303927 AHDC1Q5TGY3 1603 aaPredicted RBP29.63■■■□□ 2.33
CAVIN3-201ENST00000303927 FOXD1Q16676 465 aa29.61■■■□□ 2.33
CAVIN3-201ENST00000303927 POTEAQ6S8J7 498 aa29.6■■■□□ 2.33
CAVIN3-201ENST00000303927 METP08581 1390 aa29.6■■■□□ 2.33
CAVIN3-201ENST00000303927 DCCP43146 1447 aa29.6■■■□□ 2.33
CAVIN3-201ENST00000303927 CCDC144AA2RUR9 1427 aa29.56■■■□□ 2.32
CAVIN3-201ENST00000303927 SHPRHQ149N8 1683 aa29.56■■■□□ 2.32
CAVIN3-201ENST00000303927 LRP6O75581 1613 aa29.53■■■□□ 2.32
CAVIN3-201ENST00000303927 BRINP3Q76B58 766 aa29.53■■■□□ 2.32
CAVIN3-201ENST00000303927 SPATA31A6Q5VVP1 1343 aa29.52■■■□□ 2.32
CAVIN3-201ENST00000303927 ASXL1Q8IXJ9 1541 aa29.52■■■□□ 2.32
CAVIN3-201ENST00000303927 MST1RQ04912 1400 aa29.51■■■□□ 2.31
CAVIN3-201ENST00000303927 NALCNQ8IZF0 1738 aa29.51■■■□□ 2.31
CAVIN3-201ENST00000303927 ADGRL3Q9HAR2 1447 aa29.49■■■□□ 2.31
CAVIN3-201ENST00000303927 SETD1AO15047 1707 aaKnown RBP29.48■■■□□ 2.31
CAVIN3-201ENST00000303927 NHSL1Q5SYE7 1610 aa29.46■■■□□ 2.31
CAVIN3-201ENST00000303927 RPGRIP1LQ68CZ1 1315 aa29.45■■■□□ 2.31
CAVIN3-201ENST00000303927 TRIM26Q12899 539 aaPredicted RBP29.45■■■□□ 2.31
CAVIN3-201ENST00000303927 MEX3CQ5U5Q3 659 aaKnown RBP29.45■■■□□ 2.31
CAVIN3-201ENST00000303927 PPLO60437 1756 aa29.44■■■□□ 2.3
CAVIN3-201ENST00000303927 VGFO15240 615 aaPredicted RBP29.43■■■□□ 2.3
CAVIN3-201ENST00000303927 PTCH1Q13635 1447 aa29.42■■■□□ 2.3
CAVIN3-201ENST00000303927 SPATA31E1Q6ZUB1 1445 aa29.41■■■□□ 2.3
CAVIN3-201ENST00000303927 ANKRD30BQ9BXX2 1392 aa29.39■■■□□ 2.3
CAVIN3-201ENST00000303927 ROBO2Q9HCK4 1378 aa29.37■■■□□ 2.29
CAVIN3-201ENST00000303927 IFT172Q9UG01 1749 aa29.36■■■□□ 2.29
CAVIN3-201ENST00000303927 PRAG1Q86YV5 1406 aa29.36■■■□□ 2.29
CAVIN3-201ENST00000303927 ZNF772Q68DY9 489 aaPredicted RBP29.35■■■□□ 2.29
CAVIN3-201ENST00000303927 NUTM2BA6NNL0 878 aaPredicted RBP29.34■■■□□ 2.29
CAVIN3-201ENST00000303927 NUTM2EB1AL46 878 aaPredicted RBP29.34■■■□□ 2.29
CAVIN3-201ENST00000303927 NUTM2AQ8IVF1 878 aaPredicted RBP29.34■■■□□ 2.29
CAVIN3-201ENST00000303927 RGL3Q3MIN7 710 aa29.33■■■□□ 2.29
CAVIN3-201ENST00000303927 C1orf167Q5SNV9 1468 aa29.33■■■□□ 2.29
CAVIN3-201ENST00000303927 DDX17Q92841 729 aaKnown RBP29.32■■■□□ 2.28
CAVIN3-201ENST00000303927 LRRC59Q96AG4 307 aaKnown RBP29.31■■■□□ 2.28
CAVIN3-201ENST00000303927 LAMC1P11047 1609 aa29.29■■■□□ 2.28
CAVIN3-201ENST00000303927 PNPLA6Q8IY17 1366 aa29.26■■■□□ 2.28
CAVIN3-201ENST00000303927 AFF2P51816 1311 aa29.22■■■□□ 2.27
CAVIN3-201ENST00000303927 ADGRF5Q8IZF2 1346 aa29.22■■■□□ 2.27
CAVIN3-201ENST00000303927 CDC42BPGQ6DT37 1551 aa29.22■■■□□ 2.27
CAVIN3-201ENST00000303927 ORAI2Q96SN7 254 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms