RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 TOMM22Q9NS69 142 aa25.88■■□□□ 1.73
LETM1-201ENST00000302787 CHMP5Q9NZZ3 219 aa25.88■■□□□ 1.73
LETM1-201ENST00000302787 C1orf141Q5JVX7 400 aa25.88■■□□□ 1.73
LETM1-201ENST00000302787 DIAPH3Q9NSV4 1193 aa25.87■■□□□ 1.73
LETM1-201ENST00000302787 RRBP1Q9P2E9 1410 aaKnown RBP25.87■■□□□ 1.73
LETM1-201ENST00000302787 RASSF8Q8NHQ8 419 aa25.86■■□□□ 1.73
LETM1-201ENST00000302787 STAC3Q96MF2 364 aa25.86■■□□□ 1.73
LETM1-201ENST00000302787 FAM184AQ8NB25 1140 aa25.86■■□□□ 1.73
LETM1-201ENST00000302787 TEFQ10587 303 aa25.85■■□□□ 1.73
LETM1-201ENST00000302787 CCDC9Q9Y3X0 531 aaKnown RBP25.85■■□□□ 1.73
LETM1-201ENST00000302787 AMER1Q5JTC6 1135 aaPredicted RBP25.84■■□□□ 1.73
LETM1-201ENST00000302787 ROCK1Q13464 1354 aa25.84■■□□□ 1.73
LETM1-201ENST00000302787 ARAP1Q96P48 1450 aa25.84■■□□□ 1.73
LETM1-201ENST00000302787 PRDM2Q13029 1718 aa25.83■■□□□ 1.73
LETM1-201ENST00000302787 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.73
LETM1-201ENST00000302787 EIF2S2P20042 333 aaKnown RBP25.82■■□□□ 1.72
LETM1-201ENST00000302787 PANK1Q8TE04 598 aa25.82■■□□□ 1.72
LETM1-201ENST00000302787 RUFY2Q8WXA3 655 aa25.82■■□□□ 1.72
LETM1-201ENST00000302787 CREBRFQ8IUR6 639 aa25.81■■□□□ 1.72
LETM1-201ENST00000302787 ADAMTS8Q9UP79 889 aa25.81■■□□□ 1.72
LETM1-201ENST00000302787 AAMPQ13685 434 aa25.81■■□□□ 1.72
LETM1-201ENST00000302787 HSP90AA2PQ14568 343 aaPredicted RBP25.81■■□□□ 1.72
LETM1-201ENST00000302787 CHMP4CQ96CF2 233 aa25.8■■□□□ 1.72
LETM1-201ENST00000302787 NOC3LQ8WTT2 800 aaKnown RBP25.8■■□□□ 1.72
LETM1-201ENST00000302787 C9orf78Q9NZ63 289 aaPredicted RBP25.8■■□□□ 1.72
LETM1-201ENST00000302787 GNAI1P63096 354 aa25.79■■□□□ 1.72
LETM1-201ENST00000302787 GOLGA6L19H0YKK7 550 aa25.79■■□□□ 1.72
LETM1-201ENST00000302787 NECTIN2Q92692 538 aa25.79■■□□□ 1.72
LETM1-201ENST00000302787 LNPKQ9C0E8 428 aa25.79■■□□□ 1.72
LETM1-201ENST00000302787 C22orf23Q9BZE7 217 aa25.78■■□□□ 1.72
LETM1-201ENST00000302787 NEXNQ0ZGT2 675 aa25.77■■□□□ 1.72
LETM1-201ENST00000302787 ZKSCAN1P17029 563 aaPredicted RBP25.77■■□□□ 1.72
LETM1-201ENST00000302787 INTS3Q68E01 1043 aaKnown RBP25.76■■□□□ 1.71
LETM1-201ENST00000302787 TMX4Q9H1E5 349 aaPredicted RBP25.76■■□□□ 1.71
LETM1-201ENST00000302787 FRAT2O75474 233 aaPredicted RBP25.76■■□□□ 1.71
LETM1-201ENST00000302787 BECN2A8MW95 431 aa25.75■■□□□ 1.71
LETM1-201ENST00000302787 CDCA7LQ96GN5 454 aa25.75■■□□□ 1.71
LETM1-201ENST00000302787 ANO2Q9NQ90 1003 aa25.75■■□□□ 1.71
LETM1-201ENST00000302787 FKBP5Q13451 457 aaPredicted RBP25.75■■□□□ 1.71
LETM1-201ENST00000302787 IFIT2P09913 472 aaKnown RBP25.75■■□□□ 1.71
LETM1-201ENST00000302787 GGNBP2Q9H3C7 697 aa25.74■■□□□ 1.71
LETM1-201ENST00000302787 HMOX1P09601 288 aa25.74■■□□□ 1.71
LETM1-201ENST00000302787 GOLGA6L1Q8N7Z2 621 aa25.74■■□□□ 1.71
LETM1-201ENST00000302787 NFKBIBQ15653 356 aa25.73■■□□□ 1.71
LETM1-201ENST00000302787 MCTP1Q6DN14 999 aa25.73■■□□□ 1.71
LETM1-201ENST00000302787 TPM3P06753 285 aa25.73■■□□□ 1.71
LETM1-201ENST00000302787 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.716e-7■■■■□ 23.2
LETM1-201ENST00000302787 SYNJ1O43426 1573 aa25.72■■□□□ 1.71
LETM1-201ENST00000302787 GTF2E1P29083 439 aaPredicted RBP25.71■■□□□ 1.71
LETM1-201ENST00000302787 TTC5Q8N0Z6 440 aa25.71■■□□□ 1.71
LETM1-201ENST00000302787 CFTRP13569 1480 aa25.71■■□□□ 1.71
LETM1-201ENST00000302787 CABP2Q9NPB3 220 aa25.7■■□□□ 1.71
LETM1-201ENST00000302787 PPP2R1AP30153 589 aa25.7■■□□□ 1.71
LETM1-201ENST00000302787 NUCB2P80303 420 aa25.7■■□□□ 1.71
LETM1-201ENST00000302787 TSPYL4Q9UJ04 414 aa25.7■■□□□ 1.7
LETM1-201ENST00000302787 LRRFIP1Q32MZ4 808 aaKnown RBP25.69■■□□□ 1.7
LETM1-201ENST00000302787 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
LETM1-201ENST00000302787 MTHFSP49914 203 aa25.67■■□□□ 1.7
LETM1-201ENST00000302787 TPD52L1Q16890 204 aaPredicted RBP25.67■■□□□ 1.7
LETM1-201ENST00000302787 TMEM132EQ6IEE7 984 aa25.67■■□□□ 1.7
LETM1-201ENST00000302787 TCP11L2Q8N4U5 519 aa25.67■■□□□ 1.7
LETM1-201ENST00000302787 DDX58O95786 925 aaKnown RBP25.66■■□□□ 1.7
LETM1-201ENST00000302787 AKAP17AQ02040 695 aaKnown RBP25.66■■□□□ 1.7
LETM1-201ENST00000302787 CDC45O75419 566 aa25.66■■□□□ 1.7
LETM1-201ENST00000302787 G3BP1Q13283 466 aaKnown RBP eCLIP25.65■■□□□ 1.75e-6■■■□□ 17.9
LETM1-201ENST00000302787 RNF20Q5VTR2 975 aa25.65■■□□□ 1.7
LETM1-201ENST00000302787 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.65■■□□□ 1.7
LETM1-201ENST00000302787 SYNE3Q6ZMZ3 975 aa25.65■■□□□ 1.7
LETM1-201ENST00000302787 TNNT3P45378 269 aaPredicted RBP25.65■■□□□ 1.7
LETM1-201ENST00000302787 PES1O00541 588 aaKnown RBP25.64■■□□□ 1.7
LETM1-201ENST00000302787 CPLX2Q6PUV4 134 aaKnown RBP25.64■■□□□ 1.7
LETM1-201ENST00000302787 MARCH6O60337 910 aa25.63■■□□□ 1.69
LETM1-201ENST00000302787 G3V3G9 751 aa25.63■■□□□ 1.69
LETM1-201ENST00000302787 DCAF8Q5TAQ9 597 aa25.63■■□□□ 1.69
LETM1-201ENST00000302787 SMC3Q9UQE7 1217 aa25.63■■□□□ 1.69
LETM1-201ENST00000302787 ARHGAP5Q13017 1502 aa25.63■■□□□ 1.69
LETM1-201ENST00000302787 NBPF8Q3BBV2 869 aa25.62■■□□□ 1.69
LETM1-201ENST00000302787 HSP90AB4PQ58FF6 505 aa25.62■■□□□ 1.69
LETM1-201ENST00000302787 CFAP70Q5T0N1 1121 aa25.62■■□□□ 1.69
LETM1-201ENST00000302787 VPS37CA5D8V6 355 aaPredicted RBP25.61■■□□□ 1.69
LETM1-201ENST00000302787 BICD2Q8TD16 824 aa25.61■■□□□ 1.69
LETM1-201ENST00000302787 AKNAQ7Z591 1439 aa25.61■■□□□ 1.69
LETM1-201ENST00000302787 NBPF1Q3BBV0 1214 aa25.6■■□□□ 1.69
LETM1-201ENST00000302787 EHBP1L1Q8N3D4 1523 aa25.6■■□□□ 1.69
LETM1-201ENST00000302787 EFCAB5A4FU69 1503 aa25.6■■□□□ 1.69
LETM1-201ENST00000302787 KIAA1107Q9UPP5 1409 aa25.59■■□□□ 1.69
LETM1-201ENST00000302787 TRIM29Q14134 588 aa25.59■■□□□ 1.69
LETM1-201ENST00000302787 ERC2O15083 957 aa25.59■■□□□ 1.69
LETM1-201ENST00000302787 PSME1Q06323 249 aa25.59■■□□□ 1.69
LETM1-201ENST00000302787 TSR1Q2NL82 804 aaKnown RBP25.59■■□□□ 1.69
LETM1-201ENST00000302787 CPLX1O14810 134 aa25.59■■□□□ 1.69
LETM1-201ENST00000302787 CYB5RLQ6IPT4 315 aa25.58■■□□□ 1.69
LETM1-201ENST00000302787 ZNF592Q92610 1267 aa25.58■■□□□ 1.69
LETM1-201ENST00000302787 EVA1CP58658 441 aa25.58■■□□□ 1.68
LETM1-201ENST00000302787 HFM1A2PYH4 1435 aa25.57■■□□□ 1.68
LETM1-201ENST00000302787 PDZRN3Q9UPQ7 1066 aa25.57■■□□□ 1.68
LETM1-201ENST00000302787 A0A0U1RQG5 324 aaPredicted RBP25.57■■□□□ 1.68
LETM1-201ENST00000302787 TPM1P09493 284 aa25.57■■□□□ 1.68
LETM1-201ENST00000302787 NCBP3Q53F19 620 aaKnown RBP25.57■■□□□ 1.68
LETM1-201ENST00000302787 CCAR2Q8N163 923 aaKnown RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms