RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PPP2R1AP30153 589 aa23.91■■□□□ 1.42
TSR1-201ENST00000301364 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.91■■□□□ 1.42
TSR1-201ENST00000301364 TROQ12816 1431 aaPredicted RBP23.9■■□□□ 1.42
TSR1-201ENST00000301364 RSPH6AQ9H0K4 717 aa23.9■■□□□ 1.42
TSR1-201ENST00000301364 HECW1Q76N89 1606 aa23.9■■□□□ 1.42
TSR1-201ENST00000301364 SUPT6HQ7KZ85 1726 aaKnown RBP23.89■■□□□ 1.41
TSR1-201ENST00000301364 C9orf84Q5VXU9 1444 aa23.88■■□□□ 1.41
TSR1-201ENST00000301364 DAPK1P53355 1430 aa23.88■■□□□ 1.41
TSR1-201ENST00000301364 AKNAQ7Z591 1439 aa23.87■■□□□ 1.41
TSR1-201ENST00000301364 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
TSR1-201ENST00000301364 ROCK1Q13464 1354 aa23.87■■□□□ 1.41
TSR1-201ENST00000301364 REC8O95072 547 aa23.86■■□□□ 1.41
TSR1-201ENST00000301364 NFKBIBQ15653 356 aa23.86■■□□□ 1.41
TSR1-201ENST00000301364 GNL2Q13823 731 aaKnown RBP23.86■■□□□ 1.41
TSR1-201ENST00000301364 NBPF1Q3BBV0 1214 aa23.86■■□□□ 1.41
TSR1-201ENST00000301364 PANK1Q8TE04 598 aa23.85■■□□□ 1.41
TSR1-201ENST00000301364 CCDC184Q52MB2 194 aa23.84■■□□□ 1.41
TSR1-201ENST00000301364 NOL8Q76FK4 1167 aaKnown RBP23.84■■□□□ 1.41
TSR1-201ENST00000301364 PDE3AQ14432 1141 aa23.83■■□□□ 1.41
TSR1-201ENST00000301364 GNAI1P63096 354 aa23.83■■□□□ 1.41
TSR1-201ENST00000301364 CSB-PGBD3P0DP91 1061 aa23.82■■□□□ 1.4
TSR1-201ENST00000301364 ARHGAP5Q13017 1502 aa23.82■■□□□ 1.4
TSR1-201ENST00000301364 C22orf23Q9BZE7 217 aa23.82■■□□□ 1.4
TSR1-201ENST00000301364 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
TSR1-201ENST00000301364 SCAPERQ9BY12 1400 aa23.81■■□□□ 1.4
TSR1-201ENST00000301364 ATP6V1DQ9Y5K8 247 aa23.81■■□□□ 1.4
TSR1-201ENST00000301364 PRG4Q92954 1404 aaPredicted RBP23.81■■□□□ 1.4
TSR1-201ENST00000301364 TCP11L2Q8N4U5 519 aa23.81■■□□□ 1.4
TSR1-201ENST00000301364 RILPL2Q969X0 211 aa23.8■■□□□ 1.4
TSR1-201ENST00000301364 NESP48681 1621 aa23.79■■□□□ 1.4
TSR1-201ENST00000301364 BACH2Q9BYV9 841 aa23.79■■□□□ 1.4
TSR1-201ENST00000301364 NUTM2FA1L443 756 aa23.79■■□□□ 1.4
TSR1-201ENST00000301364 MTHFSP49914 203 aa23.79■■□□□ 1.4
TSR1-201ENST00000301364 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
TSR1-201ENST00000301364 NPHP1O15259 732 aa23.79■■□□□ 1.4
TSR1-201ENST00000301364 CFAP70Q5T0N1 1121 aa23.79■■□□□ 1.4
TSR1-201ENST00000301364 KIF3AQ9Y496 699 aa23.78■■□□□ 1.4
TSR1-201ENST00000301364 PCF11O94913 1555 aaKnown RBP23.78■■□□□ 1.4
TSR1-201ENST00000301364 PLEKHH2Q8IVE3 1493 aa23.77■■□□□ 1.4
TSR1-201ENST00000301364 LTV1Q96GA3 475 aaPredicted RBP23.77■■□□□ 1.4
TSR1-201ENST00000301364 EPRSP07814 1512 aaKnown RBP23.77■■□□□ 1.4
TSR1-201ENST00000301364 TPM4P67936 248 aa23.77■■□□□ 1.4
TSR1-201ENST00000301364 IFT140Q96RY7 1462 aa23.77■■□□□ 1.39
TSR1-201ENST00000301364 HSP90B1P14625 803 aaKnown RBP23.76■■□□□ 1.39
TSR1-201ENST00000301364 GORABQ5T7V8 394 aa23.76■■□□□ 1.39
TSR1-201ENST00000301364 LNPKQ9C0E8 428 aa23.76■■□□□ 1.39
TSR1-201ENST00000301364 FOXD4L5Q5VV16 416 aaPredicted RBP23.75■■□□□ 1.39
TSR1-201ENST00000301364 FOXD4L4Q8WXT5 416 aaPredicted RBP23.75■■□□□ 1.39
TSR1-201ENST00000301364 AFAP1Q8N556 730 aa23.75■■□□□ 1.39
TSR1-201ENST00000301364 GGNBP2Q9H3C7 697 aa23.74■■□□□ 1.39
TSR1-201ENST00000301364 ANKRD30BQ9BXX2 1392 aa23.73■■□□□ 1.39
TSR1-201ENST00000301364 NUCB2P80303 420 aa23.73■■□□□ 1.39
TSR1-201ENST00000301364 INTS3Q68E01 1043 aaKnown RBP23.73■■□□□ 1.39
TSR1-201ENST00000301364 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
TSR1-201ENST00000301364 NINLQ9Y2I6 1382 aa23.73■■□□□ 1.39
TSR1-201ENST00000301364 ERBINQ96RT1 1412 aa23.72■■□□□ 1.39
TSR1-201ENST00000301364 CHMP3Q9Y3E7 222 aa23.72■■□□□ 1.39
TSR1-201ENST00000301364 TRHP20396 242 aaPredicted RBP23.72■■□□□ 1.39
TSR1-201ENST00000301364 RUFY2Q8WXA3 655 aa23.71■■□□□ 1.39
TSR1-201ENST00000301364 TMEM132EQ6IEE7 984 aa23.7■■□□□ 1.39
TSR1-201ENST00000301364 CCDC34Q96HJ3 373 aa23.7■■□□□ 1.39
TSR1-201ENST00000301364 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.7■■□□□ 1.385e-21■□□□□ 10.3
TSR1-201ENST00000301364 CHMP4CQ96CF2 233 aa23.7■■□□□ 1.38
TSR1-201ENST00000301364 CABP2Q9NPB3 220 aa23.7■■□□□ 1.38
TSR1-201ENST00000301364 HSP90AA2PQ14568 343 aaPredicted RBP23.69■■□□□ 1.38
TSR1-201ENST00000301364 TEFQ10587 303 aa23.68■■□□□ 1.38
TSR1-201ENST00000301364 DIAPH3Q9NSV4 1193 aa23.68■■□□□ 1.38
TSR1-201ENST00000301364 TAF7LQ5H9L4 462 aa23.67■■□□□ 1.38
TSR1-201ENST00000301364 ZNF330Q9Y3S2 320 aaPredicted RBP23.67■■□□□ 1.38
TSR1-201ENST00000301364 PDZRN3Q9UPQ7 1066 aa23.67■■□□□ 1.38
TSR1-201ENST00000301364 PEG3Q9GZU2 1588 aa23.67■■□□□ 1.38
TSR1-201ENST00000301364 KIAA0586Q9BVV6 1533 aa23.67■■□□□ 1.38
TSR1-201ENST00000301364 CDC45O75419 566 aa23.66■■□□□ 1.38
TSR1-201ENST00000301364 CT47B1P0C2W7 299 aaPredicted RBP23.66■■□□□ 1.38
TSR1-201ENST00000301364 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
TSR1-201ENST00000301364 CDK13Q14004 1512 aaKnown RBP23.65■■□□□ 1.38
TSR1-201ENST00000301364 PTPN23Q9H3S7 1636 aa23.65■■□□□ 1.38
TSR1-201ENST00000301364 HMOX1P09601 288 aa23.65■■□□□ 1.38
TSR1-201ENST00000301364 BCAR3O75815 825 aa23.64■■□□□ 1.38
TSR1-201ENST00000301364 C11orf95C9JLR9 678 aaPredicted RBP23.64■■□□□ 1.38
TSR1-201ENST00000301364 CUL7Q14999 1698 aa23.64■■□□□ 1.38
TSR1-201ENST00000301364 ZKSCAN1P17029 563 aaPredicted RBP23.64■■□□□ 1.37
TSR1-201ENST00000301364 C1orf141Q5JVX7 400 aa23.64■■□□□ 1.37
TSR1-201ENST00000301364 MRE11P49959 708 aa23.63■■□□□ 1.37
TSR1-201ENST00000301364 FKBP5Q13451 457 aaPredicted RBP23.63■■□□□ 1.37
TSR1-201ENST00000301364 CC2D2AQ9P2K1 1620 aa23.63■■□□□ 1.37
TSR1-201ENST00000301364 EXOSC9Q06265 439 aaKnown RBP23.63■■□□□ 1.37
TSR1-201ENST00000301364 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
TSR1-201ENST00000301364 BICRAQ9NZM4 1560 aa23.62■■□□□ 1.37
TSR1-201ENST00000301364 ANO2Q9NQ90 1003 aa23.62■■□□□ 1.37
TSR1-201ENST00000301364 NCOA1Q15788 1441 aa23.62■■□□□ 1.37
TSR1-201ENST00000301364 H3BQV1 296 aa23.61■■□□□ 1.37
TSR1-201ENST00000301364 IFFO2Q5TF58 517 aa23.61■■□□□ 1.37
TSR1-201ENST00000301364 SF3A1Q15459 793 aaKnown RBP23.6■■□□□ 1.37
TSR1-201ENST00000301364 C9orf78Q9NZ63 289 aaPredicted RBP23.6■■□□□ 1.37
TSR1-201ENST00000301364 ABCC5O15440 1437 aa23.6■■□□□ 1.37
TSR1-201ENST00000301364 SLC12A5Q9H2X9 1139 aa23.6■■□□□ 1.37
TSR1-201ENST00000301364 TSPYL4Q9UJ04 414 aa23.6■■□□□ 1.37
TSR1-201ENST00000301364 IQGAP2Q13576 1575 aa23.59■■□□□ 1.37
TSR1-201ENST00000301364 NEXNQ0ZGT2 675 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms