RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 TIMELESSQ9UNS1 1208 aa26.04■■□□□ 1.76
TMED3-201ENST00000299705 NEXMIFQ5QGS0 1516 aa26.03■■□□□ 1.76
TMED3-201ENST00000299705 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.03■■□□□ 1.76
TMED3-201ENST00000299705 STAC3Q96MF2 364 aa26.02■■□□□ 1.76
TMED3-201ENST00000299705 PPLO60437 1756 aa26.01■■□□□ 1.75
TMED3-201ENST00000299705 TONSLQ96HA7 1378 aa26.01■■□□□ 1.75
TMED3-201ENST00000299705 IFT172Q9UG01 1749 aa26.01■■□□□ 1.75
TMED3-201ENST00000299705 HSPA2P54652 639 aa26■■□□□ 1.75
TMED3-201ENST00000299705 L3MBTL2Q969R5 705 aa26■■□□□ 1.75
TMED3-201ENST00000299705 EID1Q9Y6B2 187 aa26■■□□□ 1.75
TMED3-201ENST00000299705 ANKLE2Q86XL3 938 aa25.99■■□□□ 1.75
TMED3-201ENST00000299705 VGFO15240 615 aaPredicted RBP25.98■■□□□ 1.75
TMED3-201ENST00000299705 TXNDC2Q86VQ3 553 aa25.98■■□□□ 1.75
TMED3-201ENST00000299705 LTKP29376 864 aa25.97■■□□□ 1.75
TMED3-201ENST00000299705 DCAF11Q8TEB1 546 aa25.97■■□□□ 1.75
TMED3-201ENST00000299705 SCAF11Q99590 1463 aaKnown RBP25.97■■□□□ 1.75
TMED3-201ENST00000299705 MYOM2P54296 1465 aa25.96■■□□□ 1.75
TMED3-201ENST00000299705 POLR1AO95602 1720 aaPredicted RBP25.93■■□□□ 1.74
TMED3-201ENST00000299705 PPP1R15AO75807 674 aaPredicted RBP25.92■■□□□ 1.74
TMED3-201ENST00000299705 NUTM2DQ5VT03 806 aaPredicted RBP25.92■■□□□ 1.74
TMED3-201ENST00000299705 MED14O60244 1454 aa25.91■■□□□ 1.74
TMED3-201ENST00000299705 KDM2AQ9Y2K7 1162 aa25.91■■□□□ 1.74
TMED3-201ENST00000299705 PLEKHG1Q9ULL1 1385 aa25.91■■□□□ 1.74
TMED3-201ENST00000299705 NRXN1Q9ULB1 1477 aa25.91■■□□□ 1.74
TMED3-201ENST00000299705 ADGRF5Q8IZF2 1346 aa25.9■■□□□ 1.74
TMED3-201ENST00000299705 NCKAP5LQ9HCH0 1330 aa25.89■■□□□ 1.74
TMED3-201ENST00000299705 STRCQ7RTU9 1775 aa25.89■■□□□ 1.73
TMED3-201ENST00000299705 PIK3C2GO75747 1445 aa25.86■■□□□ 1.73
TMED3-201ENST00000299705 SETBP1Q9Y6X0 1596 aa25.86■■□□□ 1.73
TMED3-201ENST00000299705 NPHP4O75161 1426 aaPredicted RBP25.86■■□□□ 1.73
TMED3-201ENST00000299705 PRAG1Q86YV5 1406 aa25.83■■□□□ 1.73
TMED3-201ENST00000299705 IQGAP1P46940 1657 aa25.83■■□□□ 1.72
TMED3-201ENST00000299705 NRXN3Q9Y4C0 1643 aa25.81■■□□□ 1.72
TMED3-201ENST00000299705 BCANQ96GW7 911 aa25.79■■□□□ 1.72
TMED3-201ENST00000299705 DMRT2Q9Y5R5 561 aa25.79■■□□□ 1.72
TMED3-201ENST00000299705 ADAMTS13Q76LX8 1427 aa25.79■■□□□ 1.72
TMED3-201ENST00000299705 DIP2AQ14689 1571 aa25.79■■□□□ 1.72
TMED3-201ENST00000299705 C14orf93Q9H972 538 aaKnown RBP25.79■■□□□ 1.72
TMED3-201ENST00000299705 TBX22Q9Y458 520 aa25.78■■□□□ 1.72
TMED3-201ENST00000299705 LAMC1P11047 1609 aa25.77■■□□□ 1.72
TMED3-201ENST00000299705 ALKQ9UM73 1620 aa25.77■■□□□ 1.72
TMED3-201ENST00000299705 NBPF8Q3BBV2 869 aa25.77■■□□□ 1.72
TMED3-201ENST00000299705 KIAA1210Q9ULL0 1709 aa25.76■■□□□ 1.71
TMED3-201ENST00000299705 ZEB1P37275 1124 aaPredicted RBP25.74■■□□□ 1.71
TMED3-201ENST00000299705 CFAP70Q5T0N1 1121 aa25.74■■□□□ 1.71
TMED3-201ENST00000299705 SLC26A8Q96RN1 970 aa25.74■■□□□ 1.71
TMED3-201ENST00000299705 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
TMED3-201ENST00000299705 SETD1AO15047 1707 aaKnown RBP25.74■■□□□ 1.71
TMED3-201ENST00000299705 TRPM1Q7Z4N2 1603 aa25.72■■□□□ 1.71
TMED3-201ENST00000299705 PIK3R4Q99570 1358 aa25.7■■□□□ 1.7
TMED3-201ENST00000299705 METP08581 1390 aa25.68■■□□□ 1.7
TMED3-201ENST00000299705 RALGAPBQ86X10 1494 aa25.67■■□□□ 1.7
TMED3-201ENST00000299705 ADGRB1O14514 1584 aa25.66■■□□□ 1.7
TMED3-201ENST00000299705 ASXL1Q8IXJ9 1541 aa25.65■■□□□ 1.7
TMED3-201ENST00000299705 NBPF1Q3BBV0 1214 aa25.65■■□□□ 1.7
TMED3-201ENST00000299705 GPRASP1Q5JY77 1395 aa25.64■■□□□ 1.7
TMED3-201ENST00000299705 ROCK2O75116 1388 aaKnown RBP25.63■■□□□ 1.69
TMED3-201ENST00000299705 TMEM132EQ6IEE7 984 aa25.63■■□□□ 1.69
TMED3-201ENST00000299705 CHD2O14647 1828 aaKnown RBP25.62■■□□□ 1.69
TMED3-201ENST00000299705 PTPRUQ92729 1446 aa25.61■■□□□ 1.69
TMED3-201ENST00000299705 LRPPRCP42704 1394 aaKnown RBP25.6■■□□□ 1.69
TMED3-201ENST00000299705 YTHDC2Q9H6S0 1430 aaKnown RBP25.6■■□□□ 1.69
TMED3-201ENST00000299705 KCNA6P17658 529 aa25.6■■□□□ 1.69
TMED3-201ENST00000299705 ABCC11Q96J66 1382 aa25.59■■□□□ 1.69
TMED3-201ENST00000299705 NWD1Q149M9 1564 aa25.58■■□□□ 1.69
TMED3-201ENST00000299705 AMOTL2Q9Y2J4 779 aa25.58■■□□□ 1.69
TMED3-201ENST00000299705 XRN1Q8IZH2 1706 aaKnown RBP25.57■■□□□ 1.68
TMED3-201ENST00000299705 TECPR2O15040 1411 aa25.56■■□□□ 1.68
TMED3-201ENST00000299705 CARD11Q9BXL7 1154 aa25.56■■□□□ 1.68
TMED3-201ENST00000299705 KNDC1Q76NI1 1749 aa25.55■■□□□ 1.68
TMED3-201ENST00000299705 SIRT1Q96EB6 747 aa25.53■■□□□ 1.68
TMED3-201ENST00000299705 STK26Q9P289 416 aa25.53■■□□□ 1.68
TMED3-201ENST00000299705 ZNF335Q9H4Z2 1342 aaPredicted RBP25.53■■□□□ 1.68
TMED3-201ENST00000299705 DLC1Q96QB1 1528 aa25.53■■□□□ 1.68
TMED3-201ENST00000299705 NKTRP30414 1462 aaKnown RBP25.52■■□□□ 1.68
TMED3-201ENST00000299705 CPS1P31327 1500 aa25.52■■□□□ 1.68
TMED3-201ENST00000299705 STRCP1A6NGW2 1772 aa25.51■■□□□ 1.67
TMED3-201ENST00000299705 TRAK1Q9UPV9 953 aa25.51■■□□□ 1.67
TMED3-201ENST00000299705 PTCH1Q13635 1447 aa25.51■■□□□ 1.67
TMED3-201ENST00000299705 FAM135BQ49AJ0 1406 aa25.49■■□□□ 1.67
TMED3-201ENST00000299705 ROBO2Q9HCK4 1378 aa25.48■■□□□ 1.67
TMED3-201ENST00000299705 ARHGEF28Q8N1W1 1705 aaKnown RBP25.47■■□□□ 1.67
TMED3-201ENST00000299705 EIF3AQ14152 1382 aaKnown RBP25.47■■□□□ 1.67
TMED3-201ENST00000299705 LTBP4Q8N2S1 1624 aa25.44■■□□□ 1.66
TMED3-201ENST00000299705 USP47Q96K76 1375 aa25.43■■□□□ 1.66
TMED3-201ENST00000299705 PROSER2Q86WR7 435 aaPredicted RBP25.43■■□□□ 1.66
TMED3-201ENST00000299705 PRAM1Q96QH2 718 aa25.42■■□□□ 1.66
TMED3-201ENST00000299705 NCOA3Q9Y6Q9 1424 aa25.41■■□□□ 1.66
TMED3-201ENST00000299705 POGKQ9P215 609 aa25.41■■□□□ 1.66
TMED3-201ENST00000299705 WAPLQ7Z5K2 1190 aa25.4■■□□□ 1.66
TMED3-201ENST00000299705 LRRC7Q96NW7 1537 aa25.4■■□□□ 1.66
TMED3-201ENST00000299705 EIF4G2P78344 907 aaKnown RBP eCLIP25.4■■□□□ 1.66
TMED3-201ENST00000299705 CENPJQ9HC77 1338 aaPredicted RBP25.39■■□□□ 1.66
TMED3-201ENST00000299705 PLEKHH1Q9ULM0 1364 aa25.39■■□□□ 1.66
TMED3-201ENST00000299705 TMEM94Q12767 1356 aa25.37■■□□□ 1.65
TMED3-201ENST00000299705 ST20-MTHFSA0A0A6YYL1 179 aa25.35■■□□□ 1.65
TMED3-201ENST00000299705 QRICH2Q9H0J4 1663 aa25.34■■□□□ 1.65
TMED3-201ENST00000299705 SBNO2Q9Y2G9 1366 aa25.34■■□□□ 1.65
TMED3-201ENST00000299705 HSPA5P11021 654 aaKnown RBP25.34■■□□□ 1.65
TMED3-201ENST00000299705 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms