RNA–Protein interactions for RNA: ENST00000299441.4

DCHS1-201, Transcript of dachsous cadherin-related 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DCHS1, Length 10,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1-201ENST00000299441 SLC4A3P48751 1232 aa17.17■□□□□ 0.34
DCHS1-201ENST00000299441 TSR1Q2NL82 804 aaKnown RBP17.17■□□□□ 0.34
DCHS1-201ENST00000299441 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
DCHS1-201ENST00000299441 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
DCHS1-201ENST00000299441 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
DCHS1-201ENST00000299441 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
DCHS1-201ENST00000299441 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
DCHS1-201ENST00000299441 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
DCHS1-201ENST00000299441 RAPGEF2Q9Y4G8 1499 aa17.15■□□□□ 0.34
DCHS1-201ENST00000299441 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
DCHS1-201ENST00000299441 BCL11BQ9C0K0 894 aaPredicted RBP17.15■□□□□ 0.34
DCHS1-201ENST00000299441 NLRP13Q86W25 1043 aa17.15■□□□□ 0.34
DCHS1-201ENST00000299441 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
DCHS1-201ENST00000299441 TNNT3P45378 269 aaPredicted RBP17.15■□□□□ 0.34
DCHS1-201ENST00000299441 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
DCHS1-201ENST00000299441 UACAQ9BZF9 1416 aa17.13■□□□□ 0.33
DCHS1-201ENST00000299441 KIF3AQ9Y496 699 aa17.13■□□□□ 0.33
DCHS1-201ENST00000299441 ZNF592Q92610 1267 aa17.13■□□□□ 0.33
DCHS1-201ENST00000299441 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
DCHS1-201ENST00000299441 HMOX1P09601 288 aa17.12■□□□□ 0.33
DCHS1-201ENST00000299441 TPM2P07951 284 aa17.12■□□□□ 0.33
DCHS1-201ENST00000299441 AIMP1Q12904 312 aaKnown RBP17.12■□□□□ 0.33
DCHS1-201ENST00000299441 CCDC43Q96MW1 224 aaKnown RBP17.12■□□□□ 0.33
DCHS1-201ENST00000299441 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
DCHS1-201ENST00000299441 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
DCHS1-201ENST00000299441 TRIM29Q14134 588 aa17.1■□□□□ 0.33
DCHS1-201ENST00000299441 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
DCHS1-201ENST00000299441 USP47Q96K76 1375 aa17.1■□□□□ 0.33
DCHS1-201ENST00000299441 CRBNQ96SW2 442 aa17.1■□□□□ 0.33
DCHS1-201ENST00000299441 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
DCHS1-201ENST00000299441 ATF3P18847 181 aa17.09■□□□□ 0.33
DCHS1-201ENST00000299441 COG6Q9Y2V7 657 aa17.09■□□□□ 0.33
DCHS1-201ENST00000299441 MYBBP1AQ9BQG0 1328 aaKnown RBP17.09■□□□□ 0.33
DCHS1-201ENST00000299441 JPH4Q96JJ6 628 aa17.09■□□□□ 0.33
DCHS1-201ENST00000299441 BECN2A8MW95 431 aa17.08■□□□□ 0.32
DCHS1-201ENST00000299441 CPLX1O14810 134 aa17.08■□□□□ 0.32
DCHS1-201ENST00000299441 IPO9Q96P70 1041 aaKnown RBP17.08■□□□□ 0.32
DCHS1-201ENST00000299441 TPM1P09493 284 aa17.07■□□□□ 0.32
DCHS1-201ENST00000299441 PHLDB1Q86UU1 1377 aa17.07■□□□□ 0.32
DCHS1-201ENST00000299441 FKBP5Q13451 457 aaPredicted RBP17.06■□□□□ 0.32
DCHS1-201ENST00000299441 RIPK4P57078 832 aa17.06■□□□□ 0.32
DCHS1-201ENST00000299441 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
DCHS1-201ENST00000299441 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
DCHS1-201ENST00000299441 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
DCHS1-201ENST00000299441 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
DCHS1-201ENST00000299441 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
DCHS1-201ENST00000299441 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
DCHS1-201ENST00000299441 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
DCHS1-201ENST00000299441 NLRP2Q9NX02 1062 aa17.04■□□□□ 0.32
DCHS1-201ENST00000299441 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
DCHS1-201ENST00000299441 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
DCHS1-201ENST00000299441 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
DCHS1-201ENST00000299441 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
DCHS1-201ENST00000299441 NAP1L1P55209 391 aaKnown RBP17.03■□□□□ 0.32
DCHS1-201ENST00000299441 TRDNQ13061 729 aa17.03■□□□□ 0.32
DCHS1-201ENST00000299441 IKQ13123 557 aaPredicted RBP17.03■□□□□ 0.32
DCHS1-201ENST00000299441 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
DCHS1-201ENST00000299441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.02■□□□□ 0.32
DCHS1-201ENST00000299441 VPS37CA5D8V6 355 aaPredicted RBP17.02■□□□□ 0.31
DCHS1-201ENST00000299441 APAF1O14727 1248 aa17.02■□□□□ 0.31
DCHS1-201ENST00000299441 EXOC6Q8TAG9 804 aa17.02■□□□□ 0.31
DCHS1-201ENST00000299441 RIC3Q7Z5B4 369 aa17.01■□□□□ 0.31
DCHS1-201ENST00000299441 ERICH2A1L162 156 aa17.01■□□□□ 0.31
DCHS1-201ENST00000299441 BICD2Q8TD16 824 aa17.01■□□□□ 0.31
DCHS1-201ENST00000299441 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
DCHS1-201ENST00000299441 RUFY2Q8WXA3 655 aa17.01■□□□□ 0.31
DCHS1-201ENST00000299441 STRN4Q9NRL3 753 aa17.01■□□□□ 0.31
DCHS1-201ENST00000299441 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
DCHS1-201ENST00000299441 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
DCHS1-201ENST00000299441 CABP2Q9NPB3 220 aa17■□□□□ 0.31
DCHS1-201ENST00000299441 PTPRGP23470 1445 aa17■□□□□ 0.31
DCHS1-201ENST00000299441 E9PSI1 815 aa16.99■□□□□ 0.31
DCHS1-201ENST00000299441 ZKSCAN1P17029 563 aaPredicted RBP16.99■□□□□ 0.31
DCHS1-201ENST00000299441 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.99■□□□□ 0.31
DCHS1-201ENST00000299441 CENPQQ7L2Z9 268 aaPredicted RBP16.99■□□□□ 0.31
DCHS1-201ENST00000299441 WASHC4Q2M389 1173 aa16.99■□□□□ 0.31
DCHS1-201ENST00000299441 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
DCHS1-201ENST00000299441 CCDC70Q6NSX1 233 aa16.98■□□□□ 0.31
DCHS1-201ENST00000299441 ATP6V1DQ9Y5K8 247 aa16.98■□□□□ 0.31
DCHS1-201ENST00000299441 EPS15P42566 896 aa16.98■□□□□ 0.31
DCHS1-201ENST00000299441 RRP1P56182 461 aaKnown RBP16.98■□□□□ 0.31
DCHS1-201ENST00000299441 STK11IPQ8N1F8 1099 aa16.98■□□□□ 0.31
DCHS1-201ENST00000299441 TMEM132AQ24JP5 1023 aa16.97■□□□□ 0.31
DCHS1-201ENST00000299441 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
DCHS1-201ENST00000299441 CT47A1Q5JQC4 288 aaPredicted RBP16.97■□□□□ 0.31
DCHS1-201ENST00000299441 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
DCHS1-201ENST00000299441 REC8O95072 547 aa16.95■□□□□ 0.3
DCHS1-201ENST00000299441 NUTM2BA6NNL0 878 aaPredicted RBP16.95■□□□□ 0.3
DCHS1-201ENST00000299441 NUTM2EB1AL46 878 aaPredicted RBP16.95■□□□□ 0.3
DCHS1-201ENST00000299441 NUTM2AQ8IVF1 878 aaPredicted RBP16.95■□□□□ 0.3
DCHS1-201ENST00000299441 ANKRD20A12PQ8NF67 263 aa16.95■□□□□ 0.3
DCHS1-201ENST00000299441 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
DCHS1-201ENST00000299441 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
DCHS1-201ENST00000299441 ATP2B2Q01814 1243 aa16.95■□□□□ 0.3
DCHS1-201ENST00000299441 HOMER1Q86YM7 354 aa16.95■□□□□ 0.3
DCHS1-201ENST00000299441 ZFYVE27Q5T4F4 411 aa16.94■□□□□ 0.3
DCHS1-201ENST00000299441 IPO7O95373 1038 aaKnown RBP16.94■□□□□ 0.3
DCHS1-201ENST00000299441 TTLL5Q6EMB2 1281 aa16.94■□□□□ 0.3
DCHS1-201ENST00000299441 CCAR1Q8IX12 1150 aaKnown RBP16.94■□□□□ 0.3
DCHS1-201ENST00000299441 TMEM132EQ6IEE7 984 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms