RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CHMP4AQ9BY43 222 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 RAD21O60216 631 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 HOMER1Q86YM7 354 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 JPH4Q96JJ6 628 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 PDE4AP27815 886 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 GGT6Q6P531 493 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 AKAP17AQ02040 695 aaKnown RBP6.79□□□□□ -1.32
CPSF2-201ENST00000298875 CDR1P51861 262 aa6.79□□□□□ -1.32
CPSF2-201ENST00000298875 BCL11BQ9C0K0 894 aaPredicted RBP6.79□□□□□ -1.32
CPSF2-201ENST00000298875 WDR97A6NE52 1622 aa6.78□□□□□ -1.32
CPSF2-201ENST00000298875 RRP12Q5JTH9 1297 aaKnown RBP6.78□□□□□ -1.32
CPSF2-201ENST00000298875 RUFY1Q96T51 708 aa6.78□□□□□ -1.32
CPSF2-201ENST00000298875 LMOD3Q0VAK6 560 aa6.78□□□□□ -1.32
CPSF2-201ENST00000298875 TRIM29Q14134 588 aa6.78□□□□□ -1.32
CPSF2-201ENST00000298875 FBXW7Q969H0 707 aa6.78□□□□□ -1.32
CPSF2-201ENST00000298875 ARGLU1Q9NWB6 273 aaPredicted RBP6.78□□□□□ -1.32
CPSF2-201ENST00000298875 PLIN1O60240 522 aa6.78□□□□□ -1.32
CPSF2-201ENST00000298875 AMPHP49418 695 aa6.78□□□□□ -1.32
CPSF2-201ENST00000298875 ANO2Q9NQ90 1003 aa6.77□□□□□ -1.32
CPSF2-201ENST00000298875 MYBBP1AQ9BQG0 1328 aaKnown RBP6.77□□□□□ -1.32
CPSF2-201ENST00000298875 DIAPH3Q9NSV4 1193 aa6.77□□□□□ -1.33
CPSF2-201ENST00000298875 MPHOSPH9Q99550 1183 aa6.77□□□□□ -1.33
CPSF2-201ENST00000298875 IPO7O95373 1038 aaKnown RBP6.77□□□□□ -1.33
CPSF2-201ENST00000298875 HMGN5P82970 282 aaKnown RBP6.77□□□□□ -1.33
CPSF2-201ENST00000298875 ANKRD20A12PQ8NF67 263 aa6.77□□□□□ -1.33
CPSF2-201ENST00000298875 AK7Q96M32 723 aa6.77□□□□□ -1.33
CPSF2-201ENST00000298875 DCTN1Q14203 1278 aa6.77□□□□□ -1.33
CPSF2-201ENST00000298875 LTV1Q96GA3 475 aaPredicted RBP6.77□□□□□ -1.33
CPSF2-201ENST00000298875 PRDM2Q13029 1718 aa6.77□□□□□ -1.33
CPSF2-201ENST00000298875 DCAF8L1A6NGE4 600 aa6.77□□□□□ -1.33
CPSF2-201ENST00000298875 HOOK1Q9UJC3 728 aaKnown RBP6.77□□□□□ -1.33
CPSF2-201ENST00000298875 TRIM34Q9BYJ4 488 aa6.77□□□□□ -1.33
CPSF2-201ENST00000298875 INCENPQ9NQS7 918 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 CAGE1Q8TC20 777 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 SYNE3Q6ZMZ3 975 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 NGDNQ8NEJ9 315 aaKnown RBP6.76□□□□□ -1.33
CPSF2-201ENST00000298875 BICD2Q8TD16 824 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 BCL2L13Q9BXK5 485 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 EID1Q9Y6B2 187 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 GAPVD1Q14C86 1478 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 MAGI1Q96QZ7 1491 aaPredicted RBP6.76□□□□□ -1.33
CPSF2-201ENST00000298875 SYNJ1O43426 1573 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 AMOTL1Q8IY63 956 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 CCDC191Q8NCU4 936 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 PEG3Q9GZU2 1588 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 FOSBP53539 338 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 NUTM2DQ5VT03 806 aaPredicted RBP6.76□□□□□ -1.33
CPSF2-201ENST00000298875 CRBNQ96SW2 442 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 ANKRD30AQ9BXX3 1397 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 GTF2E1P29083 439 aaPredicted RBP6.76□□□□□ -1.33
CPSF2-201ENST00000298875 RRP1P56182 461 aaKnown RBP6.76□□□□□ -1.33
CPSF2-201ENST00000298875 IFT57Q9NWB7 429 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 CCDC18Q5T9S5 1454 aa6.76□□□□□ -1.33
CPSF2-201ENST00000298875 STAC3Q96MF2 364 aa6.75□□□□□ -1.33
CPSF2-201ENST00000298875 NAP1L1P55209 391 aaKnown RBP6.75□□□□□ -1.33
CPSF2-201ENST00000298875 CCDC88BA6NC98 1476 aa6.75□□□□□ -1.33
CPSF2-201ENST00000298875 PTPRGP23470 1445 aa6.75□□□□□ -1.33
CPSF2-201ENST00000298875 REC8O95072 547 aa6.75□□□□□ -1.33
CPSF2-201ENST00000298875 SASS6Q6UVJ0 657 aa6.75□□□□□ -1.33
CPSF2-201ENST00000298875 PDE3BQ13370 1112 aa6.75□□□□□ -1.33
CPSF2-201ENST00000298875 AAMPQ13685 434 aa6.74□□□□□ -1.33
CPSF2-201ENST00000298875 EXOC6Q8TAG9 804 aa6.74□□□□□ -1.33
CPSF2-201ENST00000298875 CTDP1Q9Y5B0 961 aaPredicted RBP6.74□□□□□ -1.33
CPSF2-201ENST00000298875 ZRSR2Q15696 482 aaKnown RBP6.74□□□□□ -1.33
CPSF2-201ENST00000298875 CYB5RLQ6IPT4 315 aa6.74□□□□□ -1.33
CPSF2-201ENST00000298875 NLRP13Q86W25 1043 aa6.74□□□□□ -1.33
CPSF2-201ENST00000298875 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.74□□□□□ -1.332e-12■■■■■ 298.1
CPSF2-201ENST00000298875 LRRFIP1Q32MZ4 808 aaKnown RBP6.74□□□□□ -1.33
CPSF2-201ENST00000298875 CCDC47Q96A33 483 aaKnown RBP6.74□□□□□ -1.33
CPSF2-201ENST00000298875 RAPGEF2Q9Y4G8 1499 aa6.74□□□□□ -1.33
CPSF2-201ENST00000298875 ELL2O00472 640 aaPredicted RBP6.73□□□□□ -1.33
CPSF2-201ENST00000298875 NOL10Q9BSC4 688 aaKnown RBP6.73□□□□□ -1.33
CPSF2-201ENST00000298875 CGNL1Q0VF96 1302 aa6.73□□□□□ -1.33
CPSF2-201ENST00000298875 E9PSI1 815 aa6.73□□□□□ -1.33
CPSF2-201ENST00000298875 PDILTQ8N807 584 aa6.73□□□□□ -1.33
CPSF2-201ENST00000298875 VPS37CA5D8V6 355 aaPredicted RBP6.73□□□□□ -1.33
CPSF2-201ENST00000298875 HSP90B2PQ58FF3 399 aa6.73□□□□□ -1.33
CPSF2-201ENST00000298875 C1orf141Q5JVX7 400 aa6.73□□□□□ -1.33
CPSF2-201ENST00000298875 CCP110O43303 1012 aa6.73□□□□□ -1.33
CPSF2-201ENST00000298875 CT47A1Q5JQC4 288 aaPredicted RBP6.73□□□□□ -1.33
CPSF2-201ENST00000298875 KANK4Q5T7N3 995 aaPredicted RBP6.73□□□□□ -1.33
CPSF2-201ENST00000298875 RUFY2Q8WXA3 655 aa6.73□□□□□ -1.33
CPSF2-201ENST00000298875 C9orf78Q9NZ63 289 aaPredicted RBP6.73□□□□□ -1.33
CPSF2-201ENST00000298875 PRKCSHP14314 528 aaPredicted RBP6.72□□□□□ -1.33
CPSF2-201ENST00000298875 MNS1Q8NEH6 495 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 NFXL1Q6ZNB6 911 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 CNKSR2Q8WXI2 1034 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 COG6Q9Y2V7 657 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 NUTM2FA1L443 756 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 CPLX1O14810 134 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 DHX16O60231 1041 aaKnown RBP6.72□□□□□ -1.33
CPSF2-201ENST00000298875 ZKSCAN2Q63HK3 967 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 RDXP35241 583 aaKnown RBP6.72□□□□□ -1.33
CPSF2-201ENST00000298875 HSP90AB2PQ58FF8 381 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 ZKSCAN1P17029 563 aaPredicted RBP6.72□□□□□ -1.33
CPSF2-201ENST00000298875 DNMBPQ6XZF7 1577 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 ROCK1Q13464 1354 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 WIZO95785 1651 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 FAM43AQ8N2R8 423 aa6.72□□□□□ -1.33
CPSF2-201ENST00000298875 NGEFQ8N5V2 710 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms