RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 ZNF326Q5BKZ1 582 aaKnown RBP9.27□□□□□ -0.93
TMC1-201ENST00000297784 C3P01024 1663 aa9.27□□□□□ -0.93
TMC1-201ENST00000297784 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
TMC1-201ENST00000297784 NRXN1Q9ULB1 1477 aa9.26□□□□□ -0.93
TMC1-201ENST00000297784 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
TMC1-201ENST00000297784 NEXMIFQ5QGS0 1516 aa9.25□□□□□ -0.93
TMC1-201ENST00000297784 HSPA5P11021 654 aaKnown RBP9.25□□□□□ -0.93
TMC1-201ENST00000297784 SLC52A1Q9NWF4 448 aa9.25□□□□□ -0.93
TMC1-201ENST00000297784 ADGRF5Q8IZF2 1346 aa9.24□□□□□ -0.93
TMC1-201ENST00000297784 MYOM2P54296 1465 aa9.24□□□□□ -0.93
TMC1-201ENST00000297784 C11orf95C9JLR9 678 aaPredicted RBP9.24□□□□□ -0.93
TMC1-201ENST00000297784 CEBPAP49715 358 aaPredicted RBP9.24□□□□□ -0.93
TMC1-201ENST00000297784 ADAMTSL3P82987 1691 aa9.23□□□□□ -0.93
TMC1-201ENST00000297784 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
TMC1-201ENST00000297784 KIAA1210Q9ULL0 1709 aa9.23□□□□□ -0.93
TMC1-201ENST00000297784 GPRASP1Q5JY77 1395 aa9.23□□□□□ -0.93
TMC1-201ENST00000297784 LAMC1P11047 1609 aa9.23□□□□□ -0.93
TMC1-201ENST00000297784 EIF4G2P78344 907 aaKnown RBP eCLIP9.22□□□□□ -0.93
TMC1-201ENST00000297784 A2ML1A8K2U0 1454 aa9.22□□□□□ -0.93
TMC1-201ENST00000297784 POLR1AO95602 1720 aaPredicted RBP9.22□□□□□ -0.93
TMC1-201ENST00000297784 ROCK2O75116 1388 aaKnown RBP9.22□□□□□ -0.93
TMC1-201ENST00000297784 CHGAP10645 457 aaKnown RBP9.22□□□□□ -0.93
TMC1-201ENST00000297784 PIK3C2GO75747 1445 aa9.21□□□□□ -0.93
TMC1-201ENST00000297784 UBR1Q8IWV7 1749 aa9.21□□□□□ -0.93
TMC1-201ENST00000297784 USP47Q96K76 1375 aa9.21□□□□□ -0.93
TMC1-201ENST00000297784 STAC3Q96MF2 364 aa9.21□□□□□ -0.93
TMC1-201ENST00000297784 IQGAP1P46940 1657 aa9.21□□□□□ -0.94
TMC1-201ENST00000297784 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.94
TMC1-201ENST00000297784 PLPPR3Q6T4P5 718 aa9.21□□□□□ -0.94
TMC1-201ENST00000297784 CARD11Q9BXL7 1154 aa9.21□□□□□ -0.94
TMC1-201ENST00000297784 RIMS1Q86UR5 1692 aaKnown RBP9.21□□□□□ -0.94
TMC1-201ENST00000297784 WASHC2AQ641Q2 1341 aa9.2□□□□□ -0.94
TMC1-201ENST00000297784 FANCIQ9NVI1 1328 aa9.2□□□□□ -0.94
TMC1-201ENST00000297784 ESF1Q9H501 851 aaKnown RBP9.2□□□□□ -0.94
TMC1-201ENST00000297784 KDM5AP29375 1690 aaKnown RBP9.2□□□□□ -0.94
TMC1-201ENST00000297784 RPGRIP1LQ68CZ1 1315 aa9.2□□□□□ -0.94
TMC1-201ENST00000297784 CFAP70Q5T0N1 1121 aa9.19□□□□□ -0.94
TMC1-201ENST00000297784 FKBP8Q14318 412 aa9.19□□□□□ -0.94
TMC1-201ENST00000297784 ZFYVE9O95405 1425 aa9.19□□□□□ -0.94
TMC1-201ENST00000297784 ADGRB1O14514 1584 aa9.19□□□□□ -0.94
TMC1-201ENST00000297784 TNRQ92752 1358 aa9.18□□□□□ -0.94
TMC1-201ENST00000297784 ST20-MTHFSA0A0A6YYL1 179 aa9.18□□□□□ -0.94
TMC1-201ENST00000297784 MSH5O43196 834 aa9.17□□□□□ -0.94
TMC1-201ENST00000297784 C14orf93Q9H972 538 aaKnown RBP9.17□□□□□ -0.94
TMC1-201ENST00000297784 SETD1AO15047 1707 aaKnown RBP9.17□□□□□ -0.94
TMC1-201ENST00000297784 SETBP1Q9Y6X0 1596 aa9.17□□□□□ -0.94
TMC1-201ENST00000297784 NRXN3Q9Y4C0 1643 aa9.17□□□□□ -0.94
TMC1-201ENST00000297784 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
TMC1-201ENST00000297784 TESK2Q96S53 571 aa9.16□□□□□ -0.94
TMC1-201ENST00000297784 MYO3AQ8NEV4 1616 aa9.16□□□□□ -0.94
TMC1-201ENST00000297784 DDX10Q13206 875 aaKnown RBP9.16□□□□□ -0.94
TMC1-201ENST00000297784 VGFO15240 615 aaPredicted RBP9.16□□□□□ -0.94
TMC1-201ENST00000297784 ASXL1Q8IXJ9 1541 aa9.16□□□□□ -0.94
TMC1-201ENST00000297784 KIF7Q2M1P5 1343 aa9.15□□□□□ -0.94
TMC1-201ENST00000297784 NEFLP07196 543 aa9.15□□□□□ -0.94
TMC1-201ENST00000297784 NLRP1Q9C000 1473 aa9.15□□□□□ -0.94
TMC1-201ENST00000297784 CCDC7Q96M83 1385 aa9.15□□□□□ -0.95
TMC1-201ENST00000297784 BCANQ96GW7 911 aa9.14□□□□□ -0.95
TMC1-201ENST00000297784 PTPRMP28827 1452 aa9.14□□□□□ -0.95
TMC1-201ENST00000297784 SCAF11Q99590 1463 aaKnown RBP9.14□□□□□ -0.95
TMC1-201ENST00000297784 TMEM132EQ6IEE7 984 aa9.14□□□□□ -0.95
TMC1-201ENST00000297784 RIMS2Q9UQ26 1411 aa9.14□□□□□ -0.95
TMC1-201ENST00000297784 ALKQ9UM73 1620 aa9.14□□□□□ -0.95
TMC1-201ENST00000297784 STAG3Q9UJ98 1225 aa9.13□□□□□ -0.95
TMC1-201ENST00000297784 TMEM2Q9UHN6 1383 aa9.13□□□□□ -0.95
TMC1-201ENST00000297784 ARHGEF28Q8N1W1 1705 aaKnown RBP9.13□□□□□ -0.95
TMC1-201ENST00000297784 LTKP29376 864 aa9.12□□□□□ -0.95
TMC1-201ENST00000297784 DISP3Q9P2K9 1392 aa9.12□□□□□ -0.95
TMC1-201ENST00000297784 SETD1BQ9UPS6 1966 aaKnown RBP9.12□□□□□ -0.95
TMC1-201ENST00000297784 SLIT1O75093 1534 aa9.12□□□□□ -0.95
TMC1-201ENST00000297784 ZNF142P52746 1687 aaPredicted RBP9.12□□□□□ -0.95
TMC1-201ENST00000297784 ARHGAP23Q9P227 1491 aa9.11□□□□□ -0.95
TMC1-201ENST00000297784 CCER2I3L3R5 266 aa9.11□□□□□ -0.95
TMC1-201ENST00000297784 CEP170BQ9Y4F5 1589 aaPredicted RBP9.11□□□□□ -0.95
TMC1-201ENST00000297784 QRICH2Q9H0J4 1663 aa9.09□□□□□ -0.95
TMC1-201ENST00000297784 TRAK1Q9UPV9 953 aa9.09□□□□□ -0.95
TMC1-201ENST00000297784 METP08581 1390 aa9.08□□□□□ -0.96
TMC1-201ENST00000297784 ADAMTS13Q76LX8 1427 aa9.08□□□□□ -0.96
TMC1-201ENST00000297784 MED14O60244 1454 aa9.08□□□□□ -0.96
TMC1-201ENST00000297784 KDM4FA0A1W2PPD8 638 aa9.08□□□□□ -0.96
TMC1-201ENST00000297784 MYOM1P52179 1685 aa9.08□□□□□ -0.96
TMC1-201ENST00000297784 YTHDC2Q9H6S0 1430 aaKnown RBP9.07□□□□□ -0.96
TMC1-201ENST00000297784 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.07□□□□□ -0.96
TMC1-201ENST00000297784 PLEKHG1Q9ULL1 1385 aa9.06□□□□□ -0.96
TMC1-201ENST00000297784 EIF3AQ14152 1382 aaKnown RBP9.06□□□□□ -0.96
TMC1-201ENST00000297784 ERICH6BQ5W0A0 696 aa9.06□□□□□ -0.96
TMC1-201ENST00000297784 TXNDC2Q86VQ3 553 aa9.06□□□□□ -0.96
TMC1-201ENST00000297784 THEMISQ8N1K5 641 aaPredicted RBP9.06□□□□□ -0.96
TMC1-201ENST00000297784 SBNO2Q9Y2G9 1366 aa9.05□□□□□ -0.96
TMC1-201ENST00000297784 STK26Q9P289 416 aa9.05□□□□□ -0.96
TMC1-201ENST00000297784 TMF1P82094 1093 aa9.05□□□□□ -0.96
TMC1-201ENST00000297784 KNDC1Q76NI1 1749 aa9.04□□□□□ -0.96
TMC1-201ENST00000297784 CENPJQ9HC77 1338 aaPredicted RBP9.04□□□□□ -0.96
TMC1-201ENST00000297784 TULP4Q9NRJ4 1543 aa9.04□□□□□ -0.96
TMC1-201ENST00000297784 DEKP35659 375 aaKnown RBP9.04□□□□□ -0.96
TMC1-201ENST00000297784 HDGFP51858 240 aaKnown RBP9.04□□□□□ -0.96
TMC1-201ENST00000297784 PTPRUQ92729 1446 aa9.03□□□□□ -0.96
TMC1-201ENST00000297784 PER1O15534 1290 aaPredicted RBP9.03□□□□□ -0.96
TMC1-201ENST00000297784 POLR3GLQ9BT43 218 aa9.03□□□□□ -0.96
TMC1-201ENST00000297784 DLC1Q96QB1 1528 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms