RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 ZFYVE9O95405 1425 aa24.8■■□□□ 1.56
TMEM41A-201ENST00000296254 GCC2Q8IWJ2 1684 aa24.78■■□□□ 1.56
TMEM41A-201ENST00000296254 TMEM131LA2VDJ0 1609 aa24.76■■□□□ 1.55
TMEM41A-201ENST00000296254 ROBO1Q9Y6N7 1651 aa24.75■■□□□ 1.55
TMEM41A-201ENST00000296254 MYO5BQ9ULV0 1848 aa24.75■■□□□ 1.55
TMEM41A-201ENST00000296254 PLEKHG1Q9ULL1 1385 aa24.75■■□□□ 1.55
TMEM41A-201ENST00000296254 PROSER2Q86WR7 435 aaPredicted RBP24.74■■□□□ 1.55
TMEM41A-201ENST00000296254 RIMS2Q9UQ26 1411 aa24.73■■□□□ 1.55
TMEM41A-201ENST00000296254 RBM33Q96EV2 1170 aaKnown RBP24.72■■□□□ 1.55
TMEM41A-201ENST00000296254 ROCK1Q13464 1354 aa24.71■■□□□ 1.55
TMEM41A-201ENST00000296254 E9PCH4 1651 aa24.7■■□□□ 1.54
TMEM41A-201ENST00000296254 IQGAP3Q86VI3 1631 aa24.7■■□□□ 1.54
TMEM41A-201ENST00000296254 MSH6P52701 1360 aa24.69■■□□□ 1.54
TMEM41A-201ENST00000296254 BCANQ96GW7 911 aa24.69■■□□□ 1.54
TMEM41A-201ENST00000296254 CHD2O14647 1828 aaKnown RBP24.68■■□□□ 1.54
TMEM41A-201ENST00000296254 PPP1R15AO75807 674 aaPredicted RBP24.68■■□□□ 1.54
TMEM41A-201ENST00000296254 RGS17Q9UGC6 210 aaPredicted RBP24.68■■□□□ 1.54
TMEM41A-201ENST00000296254 DIP2AQ14689 1571 aa24.64■■□□□ 1.54
TMEM41A-201ENST00000296254 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.54
TMEM41A-201ENST00000296254 ADAMTS13Q76LX8 1427 aa24.62■■□□□ 1.53
TMEM41A-201ENST00000296254 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.61■■□□□ 1.53
TMEM41A-201ENST00000296254 TBX22Q9Y458 520 aa24.61■■□□□ 1.53
TMEM41A-201ENST00000296254 NCOA3Q9Y6Q9 1424 aa24.61■■□□□ 1.53
TMEM41A-201ENST00000296254 SLAIN2Q9P270 581 aa24.59■■□□□ 1.53
TMEM41A-201ENST00000296254 PHLPP1O60346 1717 aa24.58■■□□□ 1.53
TMEM41A-201ENST00000296254 CHGAP10645 457 aaKnown RBP24.58■■□□□ 1.53
TMEM41A-201ENST00000296254 NUP155O75694 1391 aa24.57■■□□□ 1.52
TMEM41A-201ENST00000296254 PIK3R4Q99570 1358 aa24.57■■□□□ 1.52
TMEM41A-201ENST00000296254 COL16A1Q07092 1604 aaPredicted RBP24.55■■□□□ 1.52
TMEM41A-201ENST00000296254 NUTM2DQ5VT03 806 aaPredicted RBP24.54■■□□□ 1.52
TMEM41A-201ENST00000296254 TRPM2O94759 1503 aa24.54■■□□□ 1.52
TMEM41A-201ENST00000296254 JCADQ9P266 1359 aa24.54■■□□□ 1.52
TMEM41A-201ENST00000296254 POTEAQ6S8J7 498 aa24.52■■□□□ 1.52
TMEM41A-201ENST00000296254 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.51■■□□□ 1.51
TMEM41A-201ENST00000296254 SPHKAPQ2M3C7 1700 aa24.49■■□□□ 1.51
TMEM41A-201ENST00000296254 ITGAEP38570 1179 aa24.49■■□□□ 1.51
TMEM41A-201ENST00000296254 C14orf37Q86TY3 774 aa24.49■■□□□ 1.51
TMEM41A-201ENST00000296254 AHDC1Q5TGY3 1603 aaPredicted RBP24.49■■□□□ 1.51
TMEM41A-201ENST00000296254 NRXN3Q9Y4C0 1643 aa24.49■■□□□ 1.51
TMEM41A-201ENST00000296254 CADPS2Q86UW7 1296 aa24.48■■□□□ 1.51
TMEM41A-201ENST00000296254 PTPRUQ92729 1446 aa24.48■■□□□ 1.51
TMEM41A-201ENST00000296254 SETBP1Q9Y6X0 1596 aa24.48■■□□□ 1.51
TMEM41A-201ENST00000296254 C19orf44Q9H6X5 657 aa24.47■■□□□ 1.51
TMEM41A-201ENST00000296254 XRN1Q8IZH2 1706 aaKnown RBP24.47■■□□□ 1.51
TMEM41A-201ENST00000296254 DCCP43146 1447 aa24.44■■□□□ 1.5
TMEM41A-201ENST00000296254 LRP6O75581 1613 aa24.44■■□□□ 1.5
TMEM41A-201ENST00000296254 ATF3P18847 181 aa24.44■■□□□ 1.5
TMEM41A-201ENST00000296254 AMOTL2Q9Y2J4 779 aa24.43■■□□□ 1.5
TMEM41A-201ENST00000296254 SPATA31A6Q5VVP1 1343 aa24.41■■□□□ 1.5
TMEM41A-201ENST00000296254 SHPRHQ149N8 1683 aa24.41■■□□□ 1.5
TMEM41A-201ENST00000296254 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.49
TMEM41A-201ENST00000296254 CLTCL1P53675 1640 aa24.39■■□□□ 1.49
TMEM41A-201ENST00000296254 SETD1AO15047 1707 aaKnown RBP24.38■■□□□ 1.49
TMEM41A-201ENST00000296254 NEXMIFQ5QGS0 1516 aa24.38■■□□□ 1.49
TMEM41A-201ENST00000296254 RRBP1Q9P2E9 1410 aaKnown RBP24.36■■□□□ 1.49
TMEM41A-201ENST00000296254 ASXL1Q8IXJ9 1541 aa24.36■■□□□ 1.49
TMEM41A-201ENST00000296254 BRINP3Q76B58 766 aa24.36■■□□□ 1.49
TMEM41A-201ENST00000296254 METP08581 1390 aa24.36■■□□□ 1.49
TMEM41A-201ENST00000296254 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
TMEM41A-201ENST00000296254 MST1RQ04912 1400 aa24.34■■□□□ 1.49
TMEM41A-201ENST00000296254 NAIPQ13075 1403 aa24.33■■□□□ 1.49
TMEM41A-201ENST00000296254 MEX3CQ5U5Q3 659 aaKnown RBP24.31■■□□□ 1.48
TMEM41A-201ENST00000296254 ADGRL3Q9HAR2 1447 aa24.31■■□□□ 1.48
TMEM41A-201ENST00000296254 NHSL1Q5SYE7 1610 aa24.31■■□□□ 1.48
TMEM41A-201ENST00000296254 SETD5Q9C0A6 1442 aa24.29■■□□□ 1.48
TMEM41A-201ENST00000296254 NALCNQ8IZF0 1738 aa24.29■■□□□ 1.48
TMEM41A-201ENST00000296254 KIF1BO60333 1816 aa24.27■■□□□ 1.48
TMEM41A-201ENST00000296254 ZNF772Q68DY9 489 aaPredicted RBP24.27■■□□□ 1.48
TMEM41A-201ENST00000296254 PTCH1Q13635 1447 aa24.25■■□□□ 1.47
TMEM41A-201ENST00000296254 HFM1A2PYH4 1435 aa24.24■■□□□ 1.47
TMEM41A-201ENST00000296254 PRAG1Q86YV5 1406 aa24.22■■□□□ 1.47
TMEM41A-201ENST00000296254 NUTM2BA6NNL0 878 aaPredicted RBP24.19■■□□□ 1.46
TMEM41A-201ENST00000296254 NUTM2EB1AL46 878 aaPredicted RBP24.19■■□□□ 1.46
TMEM41A-201ENST00000296254 NUTM2AQ8IVF1 878 aaPredicted RBP24.19■■□□□ 1.46
TMEM41A-201ENST00000296254 C1orf167Q5SNV9 1468 aa24.18■■□□□ 1.46
TMEM41A-201ENST00000296254 PNPLA6Q8IY17 1366 aa24.17■■□□□ 1.46
TMEM41A-201ENST00000296254 TRIM52Q96A61 297 aa24.17■■□□□ 1.46
TMEM41A-201ENST00000296254 LRRC59Q96AG4 307 aaKnown RBP24.17■■□□□ 1.46
TMEM41A-201ENST00000296254 CDK12Q9NYV4 1490 aaPredicted RBP24.17■■□□□ 1.46
TMEM41A-201ENST00000296254 LAMC1P11047 1609 aa24.17■■□□□ 1.46
TMEM41A-201ENST00000296254 ROBO2Q9HCK4 1378 aa24.16■■□□□ 1.46
TMEM41A-201ENST00000296254 VGFO15240 615 aaPredicted RBP24.16■■□□□ 1.46
TMEM41A-201ENST00000296254 DDX17Q92841 729 aaKnown RBP24.15■■□□□ 1.46
TMEM41A-201ENST00000296254 AFF2P51816 1311 aa24.14■■□□□ 1.46
TMEM41A-201ENST00000296254 PPLO60437 1756 aa24.14■■□□□ 1.46
TMEM41A-201ENST00000296254 RXRBP28702 533 aa24.14■■□□□ 1.45
TMEM41A-201ENST00000296254 RPGRIP1LQ68CZ1 1315 aa24.13■■□□□ 1.45
TMEM41A-201ENST00000296254 SLC4A1APQ9BWU0 796 aaKnown RBP24.12■■□□□ 1.45
TMEM41A-201ENST00000296254 UPF1Q92900 1129 aaKnown RBP eCLIP24.11■■□□□ 1.452e-8■■■□□ 17.5
TMEM41A-201ENST00000296254 C8orf37Q96NL8 207 aa24.08■■□□□ 1.45
TMEM41A-201ENST00000296254 CDC42BPGQ6DT37 1551 aa24.07■■□□□ 1.44
TMEM41A-201ENST00000296254 SOS2Q07890 1332 aaPredicted RBP24.07■■□□□ 1.44
TMEM41A-201ENST00000296254 RGS12O14924 1447 aa24.06■■□□□ 1.44
TMEM41A-201ENST00000296254 ORAI2Q96SN7 254 aa24.05■■□□□ 1.44
TMEM41A-201ENST00000296254 CCDC144AA2RUR9 1427 aa24.02■■□□□ 1.44
TMEM41A-201ENST00000296254 COL22A1Q8NFW1 1626 aaPredicted RBP24.01■■□□□ 1.43
TMEM41A-201ENST00000296254 TECPR2O15040 1411 aa24.01■■□□□ 1.43
TMEM41A-201ENST00000296254 SPATA31E1Q6ZUB1 1445 aa24.01■■□□□ 1.43
TMEM41A-201ENST00000296254 ADAMTS2O95450 1211 aa24■■□□□ 1.43
TMEM41A-201ENST00000296254 RBM6P78332 1123 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms