RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 IQGAP1P46940 1657 aa39.61■■■■□ 3.93
SSU72-201ENST00000291386 HDGFP51858 240 aaKnown RBP39.61■■■■□ 3.93
SSU72-201ENST00000291386 ANKRD30BQ9BXX2 1392 aa39.6■■■■□ 3.93
SSU72-201ENST00000291386 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.56■■■■□ 3.92
SSU72-201ENST00000291386 SPATA31E1Q6ZUB1 1445 aa39.5■■■■□ 3.91
SSU72-201ENST00000291386 ZNF326Q5BKZ1 582 aaKnown RBP39.5■■■■□ 3.91
SSU72-201ENST00000291386 NEXMIFQ5QGS0 1516 aa39.49■■■■□ 3.91
SSU72-201ENST00000291386 PLEKHG1Q9ULL1 1385 aa39.48■■■■□ 3.91
SSU72-201ENST00000291386 RPGRIP1LQ68CZ1 1315 aa39.47■■■■□ 3.91
SSU72-201ENST00000291386 PPP1R15AO75807 674 aaPredicted RBP39.44■■■■□ 3.9
SSU72-201ENST00000291386 PCGF6Q9BYE7 350 aa39.42■■■■□ 3.9
SSU72-201ENST00000291386 DHX57Q6P158 1386 aaKnown RBP39.4■■■■□ 3.9
SSU72-201ENST00000291386 PPLO60437 1756 aa39.4■■■■□ 3.9
SSU72-201ENST00000291386 NUTM2DQ5VT03 806 aaPredicted RBP39.38■■■■□ 3.89
SSU72-201ENST00000291386 LTBP4Q8N2S1 1624 aa39.37■■■■□ 3.89
SSU72-201ENST00000291386 ZNF335Q9H4Z2 1342 aaPredicted RBP39.35■■■■□ 3.89
SSU72-201ENST00000291386 IFT172Q9UG01 1749 aa39.34■■■■□ 3.89
SSU72-201ENST00000291386 VGFO15240 615 aaPredicted RBP39.32■■■■□ 3.89
SSU72-201ENST00000291386 SETBP1Q9Y6X0 1596 aa39.32■■■■□ 3.88
SSU72-201ENST00000291386 RGL3Q3MIN7 710 aa39.31■■■■□ 3.88
SSU72-201ENST00000291386 ADAMTS13Q76LX8 1427 aa39.31■■■■□ 3.88
SSU72-201ENST00000291386 DIP2AQ14689 1571 aa39.3■■■■□ 3.88
SSU72-201ENST00000291386 NRXN3Q9Y4C0 1643 aa39.29■■■■□ 3.88
SSU72-201ENST00000291386 BCANQ96GW7 911 aa39.29■■■■□ 3.88
SSU72-201ENST00000291386 SLC26A8Q96RN1 970 aa39.29■■■■□ 3.88
SSU72-201ENST00000291386 TBX22Q9Y458 520 aa39.29■■■■□ 3.88
SSU72-201ENST00000291386 CPS1P31327 1500 aa39.24■■■■□ 3.87
SSU72-201ENST00000291386 STRCP1A6NGW2 1772 aa39.23■■■■□ 3.87
SSU72-201ENST00000291386 PIK3R4Q99570 1358 aa39.2■■■■□ 3.87
SSU72-201ENST00000291386 MYOM2P54296 1465 aa39.18■■■■□ 3.86
SSU72-201ENST00000291386 CERKQ8TCT0 537 aa39.18■■■■□ 3.86
SSU72-201ENST00000291386 SENP3Q9H4L4 574 aaPredicted RBP39.18■■■■□ 3.86
SSU72-201ENST00000291386 CHD2O14647 1828 aaKnown RBP39.17■■■■□ 3.86
SSU72-201ENST00000291386 KCNA6P17658 529 aa39.17■■■■□ 3.86
SSU72-201ENST00000291386 NWD1Q149M9 1564 aa39.16■■■■□ 3.86
SSU72-201ENST00000291386 ADGRF5Q8IZF2 1346 aa39.15■■■■□ 3.86
SSU72-201ENST00000291386 IQSEC2Q5JU85 1478 aa39.14■■■■□ 3.86
SSU72-201ENST00000291386 NRXN1Q9ULB1 1477 aa39.14■■■■□ 3.86
SSU72-201ENST00000291386 STAC3Q96MF2 364 aa39.14■■■■□ 3.86
SSU72-201ENST00000291386 SETD1AO15047 1707 aaKnown RBP39.12■■■■□ 3.85
SSU72-201ENST00000291386 ALKQ9UM73 1620 aa39.11■■■■□ 3.85
SSU72-201ENST00000291386 PIK3C2GO75747 1445 aa39.1■■■■□ 3.85
SSU72-201ENST00000291386 SIN3AQ96ST3 1273 aa39.08■■■■□ 3.85
SSU72-201ENST00000291386 NKTRP30414 1462 aaKnown RBP39.06■■■■□ 3.84
SSU72-201ENST00000291386 LRRC7Q96NW7 1537 aa39.05■■■■□ 3.84
SSU72-201ENST00000291386 METP08581 1390 aa39.05■■■■□ 3.84
SSU72-201ENST00000291386 DCAF11Q8TEB1 546 aa39.04■■■■□ 3.84
SSU72-201ENST00000291386 PTPRUQ92729 1446 aa39.03■■■■□ 3.84
SSU72-201ENST00000291386 XRN1Q8IZH2 1706 aaKnown RBP39■■■■□ 3.83
SSU72-201ENST00000291386 LAMC1P11047 1609 aa38.97■■■■□ 3.83
SSU72-201ENST00000291386 AMOTL2Q9Y2J4 779 aa38.97■■■■□ 3.83
SSU72-201ENST00000291386 NEUROD1Q13562 356 aa38.96■■■■□ 3.83
SSU72-201ENST00000291386 C14orf93Q9H972 538 aaKnown RBP38.96■■■■□ 3.83
SSU72-201ENST00000291386 KDM2AQ9Y2K7 1162 aa38.95■■■■□ 3.83
SSU72-201ENST00000291386 XIRP1Q702N8 1843 aaKnown RBP38.95■■■■□ 3.83
SSU72-201ENST00000291386 PRAG1Q86YV5 1406 aa38.92■■■■□ 3.82
SSU72-201ENST00000291386 CLSPNQ9HAW4 1339 aa38.91■■■■□ 3.82
SSU72-201ENST00000291386 PROSER2Q86WR7 435 aaPredicted RBP38.91■■■■□ 3.82
SSU72-201ENST00000291386 L3MBTL2Q969R5 705 aa38.9■■■■□ 3.82
SSU72-201ENST00000291386 TMEM94Q12767 1356 aa38.89■■■■□ 3.82
SSU72-201ENST00000291386 ASXL1Q8IXJ9 1541 aa38.89■■■■□ 3.82
SSU72-201ENST00000291386 NCOA3Q9Y6Q9 1424 aa38.89■■■■□ 3.82
SSU72-201ENST00000291386 CFAP70Q5T0N1 1121 aa38.87■■■■□ 3.81
SSU72-201ENST00000291386 PTCH1Q13635 1447 aa38.83■■■■□ 3.81
SSU72-201ENST00000291386 FBXO41Q8TF61 875 aa38.82■■■■□ 3.8
SSU72-201ENST00000291386 LRPPRCP42704 1394 aaKnown RBP38.82■■■■□ 3.8
SSU72-201ENST00000291386 KIAA1210Q9ULL0 1709 aa38.8■■■■□ 3.8
SSU72-201ENST00000291386 TECPR2O15040 1411 aa38.8■■■■□ 3.8
SSU72-201ENST00000291386 ADGRB1O14514 1584 aa38.79■■■■□ 3.8
SSU72-201ENST00000291386 TMEM132EQ6IEE7 984 aa38.79■■■■□ 3.8
SSU72-201ENST00000291386 KNDC1Q76NI1 1749 aa38.79■■■■□ 3.8
SSU72-201ENST00000291386 ABCC11Q96J66 1382 aa38.79■■■■□ 3.8
SSU72-201ENST00000291386 YTHDC2Q9H6S0 1430 aaKnown RBP38.77■■■■□ 3.8
SSU72-201ENST00000291386 TONSLQ96HA7 1378 aa38.76■■■■□ 3.8
SSU72-201ENST00000291386 RBM33Q96EV2 1170 aaKnown RBP38.75■■■■□ 3.79
SSU72-201ENST00000291386 ROBO2Q9HCK4 1378 aa38.73■■■■□ 3.79
SSU72-201ENST00000291386 TOM1O60784 492 aa38.7■■■■□ 3.79
SSU72-201ENST00000291386 CCER1Q8TC90 406 aaPredicted RBP38.7■■■■□ 3.79
SSU72-201ENST00000291386 SIRT1Q96EB6 747 aa38.7■■■■□ 3.79
SSU72-201ENST00000291386 MSH6P52701 1360 aa38.7■■■■□ 3.78
SSU72-201ENST00000291386 UBAP1LF5GYI3 381 aa38.69■■■■□ 3.78
SSU72-201ENST00000291386 STK26Q9P289 416 aa38.67■■■■□ 3.78
SSU72-201ENST00000291386 C19orf44Q9H6X5 657 aa38.66■■■■□ 3.78
SSU72-201ENST00000291386 DLC1Q96QB1 1528 aa38.66■■■■□ 3.78
SSU72-201ENST00000291386 FAM135BQ49AJ0 1406 aa38.64■■■■□ 3.78
SSU72-201ENST00000291386 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.64■■■■□ 3.78
SSU72-201ENST00000291386 TIMELESSQ9UNS1 1208 aa38.63■■■■□ 3.77
SSU72-201ENST00000291386 ADGRL3Q9HAR2 1447 aa38.63■■■■□ 3.77
SSU72-201ENST00000291386 C14orf37Q86TY3 774 aa38.62■■■■□ 3.77
SSU72-201ENST00000291386 TRPM1Q7Z4N2 1603 aa38.62■■■■□ 3.77
SSU72-201ENST00000291386 DCCP43146 1447 aa38.61■■■■□ 3.77
SSU72-201ENST00000291386 NALCNQ8IZF0 1738 aa38.6■■■■□ 3.77
SSU72-201ENST00000291386 NBPF1Q3BBV0 1214 aa38.57■■■■□ 3.76
SSU72-201ENST00000291386 ILDR1Q86SU0 546 aaPredicted RBP38.57■■■■□ 3.76
SSU72-201ENST00000291386 NBPF8Q3BBV2 869 aa38.56■■■■□ 3.76
SSU72-201ENST00000291386 WAPLQ7Z5K2 1190 aa38.55■■■■□ 3.76
SSU72-201ENST00000291386 CADPS2Q86UW7 1296 aa38.55■■■■□ 3.76
SSU72-201ENST00000291386 PLEKHH1Q9ULM0 1364 aa38.53■■■■□ 3.76
SSU72-201ENST00000291386 TRAK1Q9UPV9 953 aa38.52■■■■□ 3.76
SSU72-201ENST00000291386 ARHGEF28Q8N1W1 1705 aaKnown RBP38.5■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms