RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
SNF8-201ENST00000290330 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
SNF8-201ENST00000290330 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
SNF8-201ENST00000290330 KCNA6P17658 529 aa15.85■□□□□ 0.13
SNF8-201ENST00000290330 ALKQ9UM73 1620 aa15.85■□□□□ 0.13
SNF8-201ENST00000290330 RIMS2Q9UQ26 1411 aa15.85■□□□□ 0.13
SNF8-201ENST00000290330 HSPA1LP34931 641 aa15.84■□□□□ 0.13
SNF8-201ENST00000290330 BCANQ96GW7 911 aa15.84■□□□□ 0.13
SNF8-201ENST00000290330 DISP3Q9P2K9 1392 aa15.84■□□□□ 0.13
SNF8-201ENST00000290330 PLEKHG1Q9ULL1 1385 aa15.84■□□□□ 0.13
SNF8-201ENST00000290330 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
SNF8-201ENST00000290330 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNF8-201ENST00000290330 HFM1A2PYH4 1435 aa15.81■□□□□ 0.12
SNF8-201ENST00000290330 MYO5BQ9ULV0 1848 aa15.81■□□□□ 0.12
SNF8-201ENST00000290330 TMEM94Q12767 1356 aa15.8■□□□□ 0.12
SNF8-201ENST00000290330 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
SNF8-201ENST00000290330 PROSER2Q86WR7 435 aaPredicted RBP15.79■□□□□ 0.12
SNF8-201ENST00000290330 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
SNF8-201ENST00000290330 TRIM52Q96A61 297 aa15.77■□□□□ 0.12
SNF8-201ENST00000290330 RBM33Q96EV2 1170 aaKnown RBP15.77■□□□□ 0.12
SNF8-201ENST00000290330 XIRP1Q702N8 1843 aaKnown RBP15.77■□□□□ 0.11
SNF8-201ENST00000290330 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
SNF8-201ENST00000290330 ADAMTS13Q76LX8 1427 aa15.77■□□□□ 0.11
SNF8-201ENST00000290330 NWD1Q149M9 1564 aa15.76■□□□□ 0.11
SNF8-201ENST00000290330 SPHKAPQ2M3C7 1700 aa15.75■□□□□ 0.11
SNF8-201ENST00000290330 ILDR2Q71H61 639 aa15.74■□□□□ 0.11
SNF8-201ENST00000290330 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
SNF8-201ENST00000290330 ZNF326Q5BKZ1 582 aaKnown RBP15.72■□□□□ 0.11
SNF8-201ENST00000290330 TRPM2O94759 1503 aa15.72■□□□□ 0.11
SNF8-201ENST00000290330 PIK3R4Q99570 1358 aa15.72■□□□□ 0.11
SNF8-201ENST00000290330 CHD2O14647 1828 aaKnown RBP15.71■□□□□ 0.11
SNF8-201ENST00000290330 FAM135BQ49AJ0 1406 aa15.71■□□□□ 0.11
SNF8-201ENST00000290330 DIP2AQ14689 1571 aa15.7■□□□□ 0.1
SNF8-201ENST00000290330 CLTCL1P53675 1640 aa15.7■□□□□ 0.1
SNF8-201ENST00000290330 MSH6P52701 1360 aa15.7■□□□□ 0.1
SNF8-201ENST00000290330 AMOTL2Q9Y2J4 779 aa15.68■□□□□ 0.1
SNF8-201ENST00000290330 NCOA3Q9Y6Q9 1424 aa15.68■□□□□ 0.1
SNF8-201ENST00000290330 PTPRUQ92729 1446 aa15.67■□□□□ 0.1
SNF8-201ENST00000290330 SETBP1Q9Y6X0 1596 aa15.66■□□□□ 0.1
SNF8-201ENST00000290330 SLAIN2Q9P270 581 aa15.66■□□□□ 0.1
SNF8-201ENST00000290330 NEXMIFQ5QGS0 1516 aa15.66■□□□□ 0.1
SNF8-201ENST00000290330 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
SNF8-201ENST00000290330 NRXN3Q9Y4C0 1643 aa15.65■□□□□ 0.1
SNF8-201ENST00000290330 C14orf37Q86TY3 774 aa15.64■□□□□ 0.09
SNF8-201ENST00000290330 MPHOSPH9Q99550 1183 aa15.64■□□□□ 0.09
SNF8-201ENST00000290330 METP08581 1390 aa15.63■□□□□ 0.09
SNF8-201ENST00000290330 C19orf44Q9H6X5 657 aa15.63■□□□□ 0.09
SNF8-201ENST00000290330 KIF1BO60333 1816 aa15.62■□□□□ 0.09
SNF8-201ENST00000290330 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
SNF8-201ENST00000290330 ROBO1Q9Y6N7 1651 aa15.62■□□□□ 0.09
SNF8-201ENST00000290330 RPGRIP1LQ68CZ1 1315 aa15.62■□□□□ 0.09
SNF8-201ENST00000290330 CADPS2Q86UW7 1296 aa15.61■□□□□ 0.09
SNF8-201ENST00000290330 SOCS7O14512 581 aa15.6■□□□□ 0.09
SNF8-201ENST00000290330 ATF3P18847 181 aa15.59■□□□□ 0.09
SNF8-201ENST00000290330 ACIN1Q9UKV3 1341 aaKnown RBP15.59■□□□□ 0.09
SNF8-201ENST00000290330 XRN1Q8IZH2 1706 aaKnown RBP15.59■□□□□ 0.09
SNF8-201ENST00000290330 SETD5Q9C0A6 1442 aa15.59■□□□□ 0.09
SNF8-201ENST00000290330 CCDC144AA2RUR9 1427 aa15.58■□□□□ 0.08
SNF8-201ENST00000290330 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.57■□□□□ 0.08
SNF8-201ENST00000290330 DCCP43146 1447 aa15.55■□□□□ 0.08
SNF8-201ENST00000290330 RGL3Q3MIN7 710 aa15.55■□□□□ 0.08
SNF8-201ENST00000290330 SPATA31E1Q6ZUB1 1445 aa15.54■□□□□ 0.08
SNF8-201ENST00000290330 RAB3GAP2Q9H2M9 1393 aa15.54■□□□□ 0.08
SNF8-201ENST00000290330 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
SNF8-201ENST00000290330 PPLO60437 1756 aa15.52■□□□□ 0.08
SNF8-201ENST00000290330 BRINP3Q76B58 766 aa15.52■□□□□ 0.08
SNF8-201ENST00000290330 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
SNF8-201ENST00000290330 SETD1AO15047 1707 aaKnown RBP15.51■□□□□ 0.07
SNF8-201ENST00000290330 ROBO2Q9HCK4 1378 aa15.51■□□□□ 0.07
SNF8-201ENST00000290330 RGS17Q9UGC6 210 aaPredicted RBP15.51■□□□□ 0.07
SNF8-201ENST00000290330 PHLPP1O60346 1717 aa15.51■□□□□ 0.07
SNF8-201ENST00000290330 MST1RQ04912 1400 aa15.51■□□□□ 0.07
SNF8-201ENST00000290330 PTCH1Q13635 1447 aa15.51■□□□□ 0.07
SNF8-201ENST00000290330 ANKRD30BQ9BXX2 1392 aa15.5■□□□□ 0.07
SNF8-201ENST00000290330 JCADQ9P266 1359 aa15.5■□□□□ 0.07
SNF8-201ENST00000290330 PRAG1Q86YV5 1406 aa15.5■□□□□ 0.07
SNF8-201ENST00000290330 COL16A1Q07092 1604 aaPredicted RBP15.5■□□□□ 0.07
SNF8-201ENST00000290330 AHDC1Q5TGY3 1603 aaPredicted RBP15.48■□□□□ 0.07
SNF8-201ENST00000290330 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.07
SNF8-201ENST00000290330 ASXL1Q8IXJ9 1541 aa15.46■□□□□ 0.07
SNF8-201ENST00000290330 HRCP23327 699 aa15.45■□□□□ 0.06
SNF8-201ENST00000290330 SPATA31A6Q5VVP1 1343 aa15.44■□□□□ 0.06
SNF8-201ENST00000290330 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
SNF8-201ENST00000290330 IFT172Q9UG01 1749 aa15.44■□□□□ 0.06
SNF8-201ENST00000290330 TMEM132EQ6IEE7 984 aa15.43■□□□□ 0.06
SNF8-201ENST00000290330 STK26Q9P289 416 aa15.43■□□□□ 0.06
SNF8-201ENST00000290330 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
SNF8-201ENST00000290330 LRPPRCP42704 1394 aaKnown RBP15.42■□□□□ 0.06
SNF8-201ENST00000290330 ABCC11Q96J66 1382 aa15.42■□□□□ 0.06
SNF8-201ENST00000290330 POTEAQ6S8J7 498 aa15.42■□□□□ 0.06
SNF8-201ENST00000290330 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
SNF8-201ENST00000290330 TECPR2O15040 1411 aa15.42■□□□□ 0.06
SNF8-201ENST00000290330 WAPLQ7Z5K2 1190 aa15.41■□□□□ 0.06
SNF8-201ENST00000290330 DDX17Q92841 729 aaKnown RBP15.41■□□□□ 0.06
SNF8-201ENST00000290330 ORAI2Q96SN7 254 aa15.41■□□□□ 0.06
SNF8-201ENST00000290330 NRXN1Q9ULB1 1477 aa15.4■□□□□ 0.06
SNF8-201ENST00000290330 LRP6O75581 1613 aa15.4■□□□□ 0.06
SNF8-201ENST00000290330 LRRC59Q96AG4 307 aaKnown RBP15.4■□□□□ 0.06
SNF8-201ENST00000290330 MYOM2P54296 1465 aa15.4■□□□□ 0.06
SNF8-201ENST00000290330 CFAP70Q5T0N1 1121 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms