RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 DHX57Q6P158 1386 aaKnown RBP25.59■■□□□ 1.69
ATG3-201ENST00000283290 EID1Q9Y6B2 187 aa25.59■■□□□ 1.69
ATG3-201ENST00000283290 CCDC144AA2RUR9 1427 aa25.58■■□□□ 1.69
ATG3-201ENST00000283290 ZFYVE9O95405 1425 aa25.58■■□□□ 1.69
ATG3-201ENST00000283290 ANKRD30BQ9BXX2 1392 aa25.57■■□□□ 1.68
ATG3-201ENST00000283290 RIMS2Q9UQ26 1411 aa25.57■■□□□ 1.68
ATG3-201ENST00000283290 ZNF335Q9H4Z2 1342 aaPredicted RBP25.54■■□□□ 1.68
ATG3-201ENST00000283290 ZNF326Q5BKZ1 582 aaKnown RBP25.54■■□□□ 1.68
ATG3-201ENST00000283290 LTBP4Q8N2S1 1624 aa25.53■■□□□ 1.68
ATG3-201ENST00000283290 RGL3Q3MIN7 710 aa25.52■■□□□ 1.68
ATG3-201ENST00000283290 PPP1R15AO75807 674 aaPredicted RBP25.48■■□□□ 1.67
ATG3-201ENST00000283290 SIN3AQ96ST3 1273 aa25.48■■□□□ 1.67
ATG3-201ENST00000283290 STRCP1A6NGW2 1772 aa25.47■■□□□ 1.67
ATG3-201ENST00000283290 NEXMIFQ5QGS0 1516 aa25.47■■□□□ 1.67
ATG3-201ENST00000283290 SPATA31E1Q6ZUB1 1445 aa25.46■■□□□ 1.67
ATG3-201ENST00000283290 PLEKHG1Q9ULL1 1385 aa25.45■■□□□ 1.67
ATG3-201ENST00000283290 PPLO60437 1756 aa25.45■■□□□ 1.66
ATG3-201ENST00000283290 HDGFP51858 240 aaKnown RBP25.45■■□□□ 1.66
ATG3-201ENST00000283290 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.45■■□□□ 1.66
ATG3-201ENST00000283290 CERKQ8TCT0 537 aa25.44■■□□□ 1.66
ATG3-201ENST00000283290 BCANQ96GW7 911 aa25.43■■□□□ 1.66
ATG3-201ENST00000283290 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
ATG3-201ENST00000283290 NEUROD1Q13562 356 aa25.42■■□□□ 1.66
ATG3-201ENST00000283290 IFT172Q9UG01 1749 aa25.42■■□□□ 1.66
ATG3-201ENST00000283290 NRXN3Q9Y4C0 1643 aa25.39■■□□□ 1.65
ATG3-201ENST00000283290 CPS1P31327 1500 aa25.37■■□□□ 1.65
ATG3-201ENST00000283290 ADAMTS13Q76LX8 1427 aa25.37■■□□□ 1.65
ATG3-201ENST00000283290 SETBP1Q9Y6X0 1596 aa25.35■■□□□ 1.65
ATG3-201ENST00000283290 DIP2AQ14689 1571 aa25.34■■□□□ 1.65
ATG3-201ENST00000283290 ADGRF5Q8IZF2 1346 aa25.33■■□□□ 1.65
ATG3-201ENST00000283290 CHD2O14647 1828 aaKnown RBP25.33■■□□□ 1.65
ATG3-201ENST00000283290 KDM2AQ9Y2K7 1162 aa25.33■■□□□ 1.65
ATG3-201ENST00000283290 RPGRIP1LQ68CZ1 1315 aa25.32■■□□□ 1.64
ATG3-201ENST00000283290 NWD1Q149M9 1564 aa25.31■■□□□ 1.64
ATG3-201ENST00000283290 DCAF11Q8TEB1 546 aa25.3■■□□□ 1.64
ATG3-201ENST00000283290 TBX22Q9Y458 520 aa25.3■■□□□ 1.64
ATG3-201ENST00000283290 IQSEC2Q5JU85 1478 aa25.3■■□□□ 1.64
ATG3-201ENST00000283290 CCER1Q8TC90 406 aaPredicted RBP25.29■■□□□ 1.64
ATG3-201ENST00000283290 LRRC7Q96NW7 1537 aa25.29■■□□□ 1.64
ATG3-201ENST00000283290 VGFO15240 615 aaPredicted RBP25.28■■□□□ 1.64
ATG3-201ENST00000283290 XIRP1Q702N8 1843 aaKnown RBP25.28■■□□□ 1.64
ATG3-201ENST00000283290 SETD1AO15047 1707 aaKnown RBP25.27■■□□□ 1.64
ATG3-201ENST00000283290 KCNA6P17658 529 aa25.27■■□□□ 1.64
ATG3-201ENST00000283290 FBXO41Q8TF61 875 aa25.24■■□□□ 1.63
ATG3-201ENST00000283290 L3MBTL2Q969R5 705 aa25.22■■□□□ 1.63
ATG3-201ENST00000283290 ALKQ9UM73 1620 aa25.22■■□□□ 1.63
ATG3-201ENST00000283290 PTPRUQ92729 1446 aa25.22■■□□□ 1.63
ATG3-201ENST00000283290 NKTRP30414 1462 aaKnown RBP25.22■■□□□ 1.63
ATG3-201ENST00000283290 ILDR1Q86SU0 546 aaPredicted RBP25.22■■□□□ 1.63
ATG3-201ENST00000283290 METP08581 1390 aa25.21■■□□□ 1.63
ATG3-201ENST00000283290 PIK3R4Q99570 1358 aa25.21■■□□□ 1.63
ATG3-201ENST00000283290 MYOM2P54296 1465 aa25.2■■□□□ 1.62
ATG3-201ENST00000283290 XRN1Q8IZH2 1706 aaKnown RBP25.2■■□□□ 1.62
ATG3-201ENST00000283290 PIK3C2GO75747 1445 aa25.18■■□□□ 1.62
ATG3-201ENST00000283290 RBM33Q96EV2 1170 aaKnown RBP25.18■■□□□ 1.62
ATG3-201ENST00000283290 NRXN1Q9ULB1 1477 aa25.16■■□□□ 1.62
ATG3-201ENST00000283290 TMEM94Q12767 1356 aa25.16■■□□□ 1.62
ATG3-201ENST00000283290 CFAP70Q5T0N1 1121 aa25.16■■□□□ 1.62
ATG3-201ENST00000283290 PROSER2Q86WR7 435 aaPredicted RBP25.16■■□□□ 1.62
ATG3-201ENST00000283290 AMOTL2Q9Y2J4 779 aa25.15■■□□□ 1.62
ATG3-201ENST00000283290 TMEM132EQ6IEE7 984 aa25.14■■□□□ 1.62
ATG3-201ENST00000283290 TONSLQ96HA7 1378 aa25.14■■□□□ 1.61
ATG3-201ENST00000283290 ASXL1Q8IXJ9 1541 aa25.14■■□□□ 1.61
ATG3-201ENST00000283290 UBAP1LF5GYI3 381 aa25.13■■□□□ 1.61
ATG3-201ENST00000283290 LAMC1P11047 1609 aa25.09■■□□□ 1.61
ATG3-201ENST00000283290 STK26Q9P289 416 aa25.09■■□□□ 1.61
ATG3-201ENST00000283290 C14orf93Q9H972 538 aaKnown RBP25.08■■□□□ 1.61
ATG3-201ENST00000283290 PRAG1Q86YV5 1406 aa25.08■■□□□ 1.6
ATG3-201ENST00000283290 NBPF8Q3BBV2 869 aa25.05■■□□□ 1.6
ATG3-201ENST00000283290 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
ATG3-201ENST00000283290 TOM1O60784 492 aa25.04■■□□□ 1.6
ATG3-201ENST00000283290 NBPF1Q3BBV0 1214 aa25.03■■□□□ 1.6
ATG3-201ENST00000283290 TRPM1Q7Z4N2 1603 aa25.02■■□□□ 1.6
ATG3-201ENST00000283290 PTCH1Q13635 1447 aa25.02■■□□□ 1.6
ATG3-201ENST00000283290 KNDC1Q76NI1 1749 aa25.02■■□□□ 1.6
ATG3-201ENST00000283290 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.02■■□□□ 1.6
ATG3-201ENST00000283290 PIP4K2BP78356 416 aa25.01■■□□□ 1.59
ATG3-201ENST00000283290 ADGRB1O14514 1584 aa25.01■■□□□ 1.59
ATG3-201ENST00000283290 MSH6P52701 1360 aa25.01■■□□□ 1.59
ATG3-201ENST00000283290 ROBO2Q9HCK4 1378 aa25.01■■□□□ 1.59
ATG3-201ENST00000283290 NCOA3Q9Y6Q9 1424 aa25.01■■□□□ 1.59
ATG3-201ENST00000283290 NALCNQ8IZF0 1738 aa25■■□□□ 1.59
ATG3-201ENST00000283290 C14orf37Q86TY3 774 aa25■■□□□ 1.59
ATG3-201ENST00000283290 STAC3Q96MF2 364 aa25■■□□□ 1.59
ATG3-201ENST00000283290 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
ATG3-201ENST00000283290 YTHDC2Q9H6S0 1430 aaKnown RBP24.99■■□□□ 1.59
ATG3-201ENST00000283290 KIAA1210Q9ULL0 1709 aa24.99■■□□□ 1.59
ATG3-201ENST00000283290 LRPPRCP42704 1394 aaKnown RBP24.98■■□□□ 1.59
ATG3-201ENST00000283290 TECPR2O15040 1411 aa24.96■■□□□ 1.59
ATG3-201ENST00000283290 TRAK1Q9UPV9 953 aa24.96■■□□□ 1.59
ATG3-201ENST00000283290 WAPLQ7Z5K2 1190 aa24.95■■□□□ 1.58
ATG3-201ENST00000283290 PLEKHH1Q9ULM0 1364 aa24.94■■□□□ 1.58
ATG3-201ENST00000283290 ABCC11Q96J66 1382 aa24.94■■□□□ 1.58
ATG3-201ENST00000283290 SAFB2Q14151 953 aaKnown RBP eCLIP24.93■■□□□ 1.58
ATG3-201ENST00000283290 C19orf44Q9H6X5 657 aa24.93■■□□□ 1.58
ATG3-201ENST00000283290 ADGRL3Q9HAR2 1447 aa24.93■■□□□ 1.58
ATG3-201ENST00000283290 ARHGEF28Q8N1W1 1705 aaKnown RBP24.91■■□□□ 1.58
ATG3-201ENST00000283290 ROBO1Q9Y6N7 1651 aa24.9■■□□□ 1.58
ATG3-201ENST00000283290 ROCK2O75116 1388 aaKnown RBP24.89■■□□□ 1.58
ATG3-201ENST00000283290 DCCP43146 1447 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms