RNA–Protein interactions for RNA: ENST00000280663.12

CACNA2D4-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 5,936 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-201ENST00000280663 MCTP1Q6DN14 999 aa16.44■□□□□ 0.22
CACNA2D4-201ENST00000280663 ZNF330Q9Y3S2 320 aaPredicted RBP16.44■□□□□ 0.22
CACNA2D4-201ENST00000280663 MNS1Q8NEH6 495 aa16.44■□□□□ 0.22
CACNA2D4-201ENST00000280663 BICD2Q8TD16 824 aa16.44■□□□□ 0.22
CACNA2D4-201ENST00000280663 CALRP27797 417 aaKnown RBP16.44■□□□□ 0.22
CACNA2D4-201ENST00000280663 AKAP17AQ02040 695 aaKnown RBP16.44■□□□□ 0.22
CACNA2D4-201ENST00000280663 AK7Q96M32 723 aa16.44■□□□□ 0.22
CACNA2D4-201ENST00000280663 IFT57Q9NWB7 429 aa16.44■□□□□ 0.22
CACNA2D4-201ENST00000280663 UACAQ9BZF9 1416 aa16.44■□□□□ 0.22
CACNA2D4-201ENST00000280663 CCDC66A2RUB6 948 aa16.43■□□□□ 0.22
CACNA2D4-201ENST00000280663 MARCH6O60337 910 aa16.43■□□□□ 0.22
CACNA2D4-201ENST00000280663 API5Q9BZZ5 524 aaKnown RBP16.43■□□□□ 0.22
CACNA2D4-201ENST00000280663 CWC15Q9P013 229 aaKnown RBP16.43■□□□□ 0.22
CACNA2D4-201ENST00000280663 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
CACNA2D4-201ENST00000280663 CCDC144AA2RUR9 1427 aa16.43■□□□□ 0.22
CACNA2D4-201ENST00000280663 PDE4CQ08493 712 aa16.43■□□□□ 0.22
CACNA2D4-201ENST00000280663 CDR1P51861 262 aa16.42■□□□□ 0.22
CACNA2D4-201ENST00000280663 SYNE3Q6ZMZ3 975 aa16.42■□□□□ 0.22
CACNA2D4-201ENST00000280663 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
CACNA2D4-201ENST00000280663 TRIM29Q14134 588 aa16.42■□□□□ 0.22
CACNA2D4-201ENST00000280663 LETM1O95202 739 aaPredicted RBP16.42■□□□□ 0.22
CACNA2D4-201ENST00000280663 RNF20Q5VTR2 975 aa16.41■□□□□ 0.22
CACNA2D4-201ENST00000280663 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
CACNA2D4-201ENST00000280663 SMC3Q9UQE7 1217 aa16.41■□□□□ 0.22
CACNA2D4-201ENST00000280663 HSP90B2PQ58FF3 399 aa16.41■□□□□ 0.22
CACNA2D4-201ENST00000280663 RUFY1Q96T51 708 aa16.4■□□□□ 0.22
CACNA2D4-201ENST00000280663 APAF1O14727 1248 aa16.4■□□□□ 0.22
CACNA2D4-201ENST00000280663 AMPHP49418 695 aa16.4■□□□□ 0.22
CACNA2D4-201ENST00000280663 CCDC173Q0VFZ6 552 aa16.4■□□□□ 0.22
CACNA2D4-201ENST00000280663 RAPGEF2Q9Y4G8 1499 aa16.4■□□□□ 0.22
CACNA2D4-201ENST00000280663 TRAK2O60296 914 aa16.39■□□□□ 0.21
CACNA2D4-201ENST00000280663 PKNOX2Q96KN3 472 aa16.39■□□□□ 0.21
CACNA2D4-201ENST00000280663 HMGN5P82970 282 aaKnown RBP16.38■□□□□ 0.21
CACNA2D4-201ENST00000280663 MLECQ14165 292 aa16.38■□□□□ 0.21
CACNA2D4-201ENST00000280663 CNTLNQ9NXG0 1405 aa16.38■□□□□ 0.21
CACNA2D4-201ENST00000280663 TMX4Q9H1E5 349 aaPredicted RBP16.38■□□□□ 0.21
CACNA2D4-201ENST00000280663 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
CACNA2D4-201ENST00000280663 PCMTD1Q96MG8 357 aaPredicted RBP16.37■□□□□ 0.21
CACNA2D4-201ENST00000280663 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
CACNA2D4-201ENST00000280663 PATL2C9JE40 543 aaKnown RBP16.37■□□□□ 0.21
CACNA2D4-201ENST00000280663 MBD3O95983 291 aa16.37■□□□□ 0.21
CACNA2D4-201ENST00000280663 ERCC4Q92889 916 aaPredicted RBP16.36■□□□□ 0.21
CACNA2D4-201ENST00000280663 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
CACNA2D4-201ENST00000280663 CDC45O75419 566 aa16.36■□□□□ 0.21
CACNA2D4-201ENST00000280663 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
CACNA2D4-201ENST00000280663 ELL2O00472 640 aaPredicted RBP16.35■□□□□ 0.21
CACNA2D4-201ENST00000280663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
CACNA2D4-201ENST00000280663 KIF3BO15066 747 aa16.35■□□□□ 0.21
CACNA2D4-201ENST00000280663 CCDC7Q96M83 1385 aa16.35■□□□□ 0.21
CACNA2D4-201ENST00000280663 CPLX1O14810 134 aa16.35■□□□□ 0.21
CACNA2D4-201ENST00000280663 SMARCA4P51532 1647 aa16.35■□□□□ 0.21
CACNA2D4-201ENST00000280663 EVC2Q86UK5 1308 aa16.34■□□□□ 0.21
CACNA2D4-201ENST00000280663 RUNDC1Q96C34 613 aa16.34■□□□□ 0.21
CACNA2D4-201ENST00000280663 IFIT2P09913 472 aaKnown RBP16.34■□□□□ 0.21
CACNA2D4-201ENST00000280663 HNRNPMP52272 730 aaKnown RBP eCLIP16.34■□□□□ 0.212e-7■■■■□ 25
CACNA2D4-201ENST00000280663 RRP12Q5JTH9 1297 aaKnown RBP16.33■□□□□ 0.21
CACNA2D4-201ENST00000280663 PRM3Q9NNZ6 103 aa16.33■□□□□ 0.21
CACNA2D4-201ENST00000280663 CCP110O43303 1012 aa16.33■□□□□ 0.2
CACNA2D4-201ENST00000280663 BRPF3Q9ULD4 1205 aa16.33■□□□□ 0.2
CACNA2D4-201ENST00000280663 TRAK1Q9UPV9 953 aa16.33■□□□□ 0.2
CACNA2D4-201ENST00000280663 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.2
CACNA2D4-201ENST00000280663 TSPY26PQ9H489 355 aa16.32■□□□□ 0.2
CACNA2D4-201ENST00000280663 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.32■□□□□ 0.2
CACNA2D4-201ENST00000280663 HSP90AB4PQ58FF6 505 aa16.32■□□□□ 0.2
CACNA2D4-201ENST00000280663 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
CACNA2D4-201ENST00000280663 COG3Q96JB2 828 aa16.32■□□□□ 0.2
CACNA2D4-201ENST00000280663 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
CACNA2D4-201ENST00000280663 FRAT2O75474 233 aaPredicted RBP16.31■□□□□ 0.2
CACNA2D4-201ENST00000280663 NEXNQ0ZGT2 675 aa16.3■□□□□ 0.2
CACNA2D4-201ENST00000280663 ERC2O15083 957 aa16.3■□□□□ 0.2
CACNA2D4-201ENST00000280663 DIAPH1O60610 1272 aaKnown RBP16.3■□□□□ 0.2
CACNA2D4-201ENST00000280663 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
CACNA2D4-201ENST00000280663 OLFM4Q6UX06 510 aa16.3■□□□□ 0.2
CACNA2D4-201ENST00000280663 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
CACNA2D4-201ENST00000280663 MCM2P49736 904 aa16.29■□□□□ 0.2
CACNA2D4-201ENST00000280663 RIPK4P57078 832 aa16.29■□□□□ 0.2
CACNA2D4-201ENST00000280663 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
CACNA2D4-201ENST00000280663 TRDNQ13061 729 aa16.29■□□□□ 0.2
CACNA2D4-201ENST00000280663 DHX8Q14562 1220 aaKnown RBP16.29■□□□□ 0.2
CACNA2D4-201ENST00000280663 CAVIN1Q6NZI2 390 aaKnown RBP16.28■□□□□ 0.2
CACNA2D4-201ENST00000280663 ATAD2BQ9ULI0 1458 aa16.28■□□□□ 0.2
CACNA2D4-201ENST00000280663 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
CACNA2D4-201ENST00000280663 RDXP35241 583 aaKnown RBP16.27■□□□□ 0.2
CACNA2D4-201ENST00000280663 GNAI1P63096 354 aa16.27■□□□□ 0.2
CACNA2D4-201ENST00000280663 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
CACNA2D4-201ENST00000280663 H0YHG0 523 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 RRP9O43818 475 aaKnown RBP16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 CCDC191Q8NCU4 936 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 ANO8Q9HCE9 1232 aaPredicted RBP16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 MIA2Q96PC5 1412 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 SAFBQ15424 915 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 PSMA5P28066 241 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 G3BP1Q13283 466 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 RABEP1Q15276 862 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 LEKR1Q6ZMV7 388 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 TRIM5Q9C035 493 aa16.26■□□□□ 0.19
CACNA2D4-201ENST00000280663 WASHC2CQ9Y4E1 1318 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms