RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 APAF1O14727 1248 aa16.42■□□□□ 0.22
SMG9-201ENST00000270066 ROCK1Q13464 1354 aa16.42■□□□□ 0.22
SMG9-201ENST00000270066 RIPK4P57078 832 aa16.42■□□□□ 0.22
SMG9-201ENST00000270066 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
SMG9-201ENST00000270066 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
SMG9-201ENST00000270066 TOP2BQ02880 1626 aa16.42■□□□□ 0.22
SMG9-201ENST00000270066 RUNDC1Q96C34 613 aa16.41■□□□□ 0.22
SMG9-201ENST00000270066 KIF16BQ96L93 1317 aa16.41■□□□□ 0.22
SMG9-201ENST00000270066 KIAA2012Q0VF49 1180 aa16.41■□□□□ 0.22
SMG9-201ENST00000270066 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
SMG9-201ENST00000270066 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
SMG9-201ENST00000270066 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
SMG9-201ENST00000270066 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
SMG9-201ENST00000270066 C9orf78Q9NZ63 289 aaPredicted RBP16.4■□□□□ 0.22
SMG9-201ENST00000270066 BCL2L13Q9BXK5 485 aa16.4■□□□□ 0.22
SMG9-201ENST00000270066 GOLGA6L3A6NEY3 463 aa16.4■□□□□ 0.22
SMG9-201ENST00000270066 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
SMG9-201ENST00000270066 VSIG10Q8N0Z9 540 aa16.39■□□□□ 0.21
SMG9-201ENST00000270066 ANKRD45Q5TZF3 282 aa16.39■□□□□ 0.21
SMG9-201ENST00000270066 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
SMG9-201ENST00000270066 DDX19BQ9UMR2 479 aa16.39■□□□□ 0.21
SMG9-201ENST00000270066 CCDC7Q96M83 1385 aa16.39■□□□□ 0.21
SMG9-201ENST00000270066 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
SMG9-201ENST00000270066 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
SMG9-201ENST00000270066 HFM1A2PYH4 1435 aa16.38■□□□□ 0.21
SMG9-201ENST00000270066 GNAI1P63096 354 aa16.38■□□□□ 0.21
SMG9-201ENST00000270066 RILPL2Q969X0 211 aa16.38■□□□□ 0.21
SMG9-201ENST00000270066 MSH5O43196 834 aa16.37■□□□□ 0.21
SMG9-201ENST00000270066 HSP90AA2PQ14568 343 aaPredicted RBP16.37■□□□□ 0.21
SMG9-201ENST00000270066 RASSF8Q8NHQ8 419 aa16.37■□□□□ 0.21
SMG9-201ENST00000270066 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
SMG9-201ENST00000270066 GPRASP1Q5JY77 1395 aa16.36■□□□□ 0.21
SMG9-201ENST00000270066 ARAP1Q96P48 1450 aa16.36■□□□□ 0.21
SMG9-201ENST00000270066 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
SMG9-201ENST00000270066 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
SMG9-201ENST00000270066 KIF7Q2M1P5 1343 aa16.35■□□□□ 0.21
SMG9-201ENST00000270066 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
SMG9-201ENST00000270066 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
SMG9-201ENST00000270066 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
SMG9-201ENST00000270066 NOL8Q76FK4 1167 aaKnown RBP16.35■□□□□ 0.21
SMG9-201ENST00000270066 RUFY2Q8WXA3 655 aa16.35■□□□□ 0.21
SMG9-201ENST00000270066 AMOTL1Q8IY63 956 aa16.34■□□□□ 0.21
SMG9-201ENST00000270066 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
SMG9-201ENST00000270066 DIAPH3Q9NSV4 1193 aa16.34■□□□□ 0.21
SMG9-201ENST00000270066 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
SMG9-201ENST00000270066 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
SMG9-201ENST00000270066 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
SMG9-201ENST00000270066 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
SMG9-201ENST00000270066 DZIP1LQ8IYY4 767 aaKnown RBP16.34■□□□□ 0.21
SMG9-201ENST00000270066 COG6Q9Y2V7 657 aa16.33■□□□□ 0.21
SMG9-201ENST00000270066 FANCIQ9NVI1 1328 aa16.33■□□□□ 0.21
SMG9-201ENST00000270066 CRBNQ96SW2 442 aa16.33■□□□□ 0.2
SMG9-201ENST00000270066 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
SMG9-201ENST00000270066 GGNBP2Q9H3C7 697 aa16.32■□□□□ 0.2
SMG9-201ENST00000270066 PLIN1O60240 522 aa16.32■□□□□ 0.2
SMG9-201ENST00000270066 GSE1Q14687 1217 aa16.32■□□□□ 0.2
SMG9-201ENST00000270066 FAM161AQ3B820 660 aa16.32■□□□□ 0.2
SMG9-201ENST00000270066 PRXQ9BXM0 1461 aa16.32■□□□□ 0.2
SMG9-201ENST00000270066 NLRP6P59044 892 aa16.32■□□□□ 0.2
SMG9-201ENST00000270066 MARCH6O60337 910 aa16.32■□□□□ 0.2
SMG9-201ENST00000270066 IFIT2P09913 472 aaKnown RBP16.32■□□□□ 0.2
SMG9-201ENST00000270066 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
SMG9-201ENST00000270066 NLRP2Q9NX02 1062 aa16.31■□□□□ 0.2
SMG9-201ENST00000270066 PHF14O94880 888 aa16.31■□□□□ 0.2
SMG9-201ENST00000270066 SYNE3Q6ZMZ3 975 aa16.31■□□□□ 0.2
SMG9-201ENST00000270066 USP35Q9P2H5 1018 aa16.31■□□□□ 0.2
SMG9-201ENST00000270066 AKAP17AQ02040 695 aaKnown RBP16.3■□□□□ 0.2
SMG9-201ENST00000270066 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
SMG9-201ENST00000270066 SCAPERQ9BY12 1400 aa16.3■□□□□ 0.2
SMG9-201ENST00000270066 G3BP1Q13283 466 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMG9-201ENST00000270066 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
SMG9-201ENST00000270066 EXOC6Q8TAG9 804 aa16.3■□□□□ 0.2
SMG9-201ENST00000270066 NECTIN2Q92692 538 aa16.3■□□□□ 0.2
SMG9-201ENST00000270066 H3BQV1 296 aa16.29■□□□□ 0.2
SMG9-201ENST00000270066 IFFO2Q5TF58 517 aa16.29■□□□□ 0.2
SMG9-201ENST00000270066 HMOX1P09601 288 aa16.29■□□□□ 0.2
SMG9-201ENST00000270066 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
SMG9-201ENST00000270066 KIAA1107Q9UPP5 1409 aa16.29■□□□□ 0.2
SMG9-201ENST00000270066 FAM184AQ8NB25 1140 aa16.29■□□□□ 0.2
SMG9-201ENST00000270066 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
SMG9-201ENST00000270066 POGZQ7Z3K3 1410 aa16.29■□□□□ 0.2
SMG9-201ENST00000270066 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
SMG9-201ENST00000270066 REC8O95072 547 aa16.28■□□□□ 0.2
SMG9-201ENST00000270066 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
SMG9-201ENST00000270066 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
SMG9-201ENST00000270066 ATP6V1DQ9Y5K8 247 aa16.28■□□□□ 0.2
SMG9-201ENST00000270066 AAMPQ13685 434 aa16.28■□□□□ 0.2
SMG9-201ENST00000270066 CPLX2Q6PUV4 134 aaKnown RBP16.27■□□□□ 0.2
SMG9-201ENST00000270066 BRD4O60885 1362 aaPredicted RBP16.27■□□□□ 0.2
SMG9-201ENST00000270066 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.2
SMG9-201ENST00000270066 VPS53Q5VIR6 699 aa16.27■□□□□ 0.2
SMG9-201ENST00000270066 VPS37DQ86XT2 251 aa16.27■□□□□ 0.2
SMG9-201ENST00000270066 ZKSCAN1P17029 563 aaPredicted RBP16.27■□□□□ 0.19
SMG9-201ENST00000270066 PDE4AP27815 886 aa16.27■□□□□ 0.19
SMG9-201ENST00000270066 KIAA0586Q9BVV6 1533 aa16.27■□□□□ 0.19
SMG9-201ENST00000270066 SMG6Q86US8 1419 aaKnown RBP16.26■□□□□ 0.19
SMG9-201ENST00000270066 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
SMG9-201ENST00000270066 ABTB2Q8N961 1025 aa16.26■□□□□ 0.19
SMG9-201ENST00000270066 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
SMG9-201ENST00000270066 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms