RNA–Protein interactions for RNA: ENST00000269724.5

SAMD1-201, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene SAMD1, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-201ENST00000269724 RIMS2Q9UQ26 1411 aa28.3■■■□□ 2.12
SAMD1-201ENST00000269724 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.3■■■□□ 2.128e-8■□□□□ 9.1
SAMD1-201ENST00000269724 CCDC144AA2RUR9 1427 aa28.28■■■□□ 2.12
SAMD1-201ENST00000269724 PLEKHG1Q9ULL1 1385 aa28.23■■■□□ 2.11
SAMD1-201ENST00000269724 LTBP4Q8N2S1 1624 aa28.22■■■□□ 2.11
SAMD1-201ENST00000269724 PPP1R15AO75807 674 aaPredicted RBP28.21■■■□□ 2.11
SAMD1-201ENST00000269724 ZNF326Q5BKZ1 582 aaKnown RBP28.2■■■□□ 2.1
SAMD1-201ENST00000269724 ZNF335Q9H4Z2 1342 aaPredicted RBP28.19■■■□□ 2.1
SAMD1-201ENST00000269724 ANKRD30BQ9BXX2 1392 aa28.19■■■□□ 2.1
SAMD1-201ENST00000269724 RPGRIP1LQ68CZ1 1315 aa28.18■■■□□ 2.1
SAMD1-201ENST00000269724 NEXMIFQ5QGS0 1516 aa28.18■■■□□ 2.1
SAMD1-201ENST00000269724 SPATA31E1Q6ZUB1 1445 aa28.16■■■□□ 2.1
SAMD1-201ENST00000269724 CERKQ8TCT0 537 aa28.15■■■□□ 2.1
SAMD1-201ENST00000269724 CPS1P31327 1500 aa28.14■■■□□ 2.1
SAMD1-201ENST00000269724 IQSEC2Q5JU85 1478 aa28.13■■■□□ 2.09
SAMD1-201ENST00000269724 DIP2AQ14689 1571 aa28.12■■■□□ 2.09
SAMD1-201ENST00000269724 BCANQ96GW7 911 aa28.11■■■□□ 2.09
SAMD1-201ENST00000269724 PPLO60437 1756 aa28.11■■■□□ 2.09
SAMD1-201ENST00000269724 VGFO15240 615 aaPredicted RBP28.1■■■□□ 2.09
SAMD1-201ENST00000269724 NUTM2DQ5VT03 806 aaPredicted RBP28.1■■■□□ 2.09
SAMD1-201ENST00000269724 TBX22Q9Y458 520 aa28.1■■■□□ 2.09
SAMD1-201ENST00000269724 SETBP1Q9Y6X0 1596 aa28.1■■■□□ 2.09
SAMD1-201ENST00000269724 SLC26A8Q96RN1 970 aa28.09■■■□□ 2.09
SAMD1-201ENST00000269724 ADAMTS13Q76LX8 1427 aa28.08■■■□□ 2.09
SAMD1-201ENST00000269724 IFT172Q9UG01 1749 aa28.06■■■□□ 2.08
SAMD1-201ENST00000269724 STRCP1A6NGW2 1772 aa28.06■■■□□ 2.08
SAMD1-201ENST00000269724 PIK3R4Q99570 1358 aa28.05■■■□□ 2.08
SAMD1-201ENST00000269724 NRXN3Q9Y4C0 1643 aa28.05■■■□□ 2.08
SAMD1-201ENST00000269724 KCNA6P17658 529 aa28.03■■■□□ 2.08
SAMD1-201ENST00000269724 RGL3Q3MIN7 710 aa28.02■■■□□ 2.08
SAMD1-201ENST00000269724 NWD1Q149M9 1564 aa28.02■■■□□ 2.08
SAMD1-201ENST00000269724 CHD2O14647 1828 aaKnown RBP28.02■■■□□ 2.08
SAMD1-201ENST00000269724 NKTRP30414 1462 aaKnown RBP27.98■■■□□ 2.07
SAMD1-201ENST00000269724 LRRC7Q96NW7 1537 aa27.97■■■□□ 2.07
SAMD1-201ENST00000269724 FBXO41Q8TF61 875 aa27.96■■■□□ 2.07
SAMD1-201ENST00000269724 DHX57Q6P158 1386 aaKnown RBP27.96■■■□□ 2.07
SAMD1-201ENST00000269724 SENP3Q9H4L4 574 aaPredicted RBP27.95■■■□□ 2.06
SAMD1-201ENST00000269724 MYOM2P54296 1465 aa27.95■■■□□ 2.06
SAMD1-201ENST00000269724 STAC3Q96MF2 364 aa27.94■■■□□ 2.06
SAMD1-201ENST00000269724 SETD1AO15047 1707 aaKnown RBP27.92■■■□□ 2.06
SAMD1-201ENST00000269724 ALKQ9UM73 1620 aa27.92■■■□□ 2.06
SAMD1-201ENST00000269724 ADGRF5Q8IZF2 1346 aa27.92■■■□□ 2.06
SAMD1-201ENST00000269724 NRXN1Q9ULB1 1477 aa27.9■■■□□ 2.06
SAMD1-201ENST00000269724 PIK3C2GO75747 1445 aa27.9■■■□□ 2.06
SAMD1-201ENST00000269724 METP08581 1390 aa27.88■■■□□ 2.05
SAMD1-201ENST00000269724 PCGF6Q9BYE7 350 aa27.87■■■□□ 2.05
SAMD1-201ENST00000269724 XIRP1Q702N8 1843 aaKnown RBP27.87■■■□□ 2.05
SAMD1-201ENST00000269724 XRN1Q8IZH2 1706 aaKnown RBP27.87■■■□□ 2.05
SAMD1-201ENST00000269724 PTPRUQ92729 1446 aa27.86■■■□□ 2.05
SAMD1-201ENST00000269724 NCOA3Q9Y6Q9 1424 aa27.85■■■□□ 2.05
SAMD1-201ENST00000269724 PROSER2Q86WR7 435 aaPredicted RBP27.85■■■□□ 2.05
SAMD1-201ENST00000269724 AMOTL2Q9Y2J4 779 aa27.85■■■□□ 2.05
SAMD1-201ENST00000269724 TMEM94Q12767 1356 aa27.84■■■□□ 2.05
SAMD1-201ENST00000269724 LAMC1P11047 1609 aa27.83■■■□□ 2.05
SAMD1-201ENST00000269724 DCAF11Q8TEB1 546 aa27.82■■■□□ 2.04
SAMD1-201ENST00000269724 PRAG1Q86YV5 1406 aa27.82■■■□□ 2.04
SAMD1-201ENST00000269724 C14orf93Q9H972 538 aaKnown RBP27.8■■■□□ 2.04
SAMD1-201ENST00000269724 TOM1O60784 492 aa27.79■■■□□ 2.04
SAMD1-201ENST00000269724 ILDR1Q86SU0 546 aaPredicted RBP27.79■■■□□ 2.04
SAMD1-201ENST00000269724 UBAP1LF5GYI3 381 aa27.78■■■□□ 2.04
SAMD1-201ENST00000269724 PTCH1Q13635 1447 aa27.76■■■□□ 2.04
SAMD1-201ENST00000269724 KDM2AQ9Y2K7 1162 aa27.75■■■□□ 2.03
SAMD1-201ENST00000269724 SIN3AQ96ST3 1273 aa27.74■■■□□ 2.03
SAMD1-201ENST00000269724 MSH6P52701 1360 aa27.73■■■□□ 2.03
SAMD1-201ENST00000269724 ASXL1Q8IXJ9 1541 aa27.72■■■□□ 2.03
SAMD1-201ENST00000269724 LRPPRCP42704 1394 aaKnown RBP27.72■■■□□ 2.03
SAMD1-201ENST00000269724 TECPR2O15040 1411 aa27.71■■■□□ 2.03
SAMD1-201ENST00000269724 KNDC1Q76NI1 1749 aa27.7■■■□□ 2.03
SAMD1-201ENST00000269724 CFAP70Q5T0N1 1121 aa27.7■■■□□ 2.02
SAMD1-201ENST00000269724 ABCC11Q96J66 1382 aa27.7■■■□□ 2.02
SAMD1-201ENST00000269724 NEUROD1Q13562 356 aa27.69■■■□□ 2.02
SAMD1-201ENST00000269724 RBM33Q96EV2 1170 aaKnown RBP27.69■■■□□ 2.02
SAMD1-201ENST00000269724 C19orf44Q9H6X5 657 aa27.68■■■□□ 2.02
SAMD1-201ENST00000269724 YTHDC2Q9H6S0 1430 aaKnown RBP27.67■■■□□ 2.02
SAMD1-201ENST00000269724 L3MBTL2Q969R5 705 aa27.67■■■□□ 2.02
SAMD1-201ENST00000269724 KIAA1210Q9ULL0 1709 aa27.67■■■□□ 2.02
SAMD1-201ENST00000269724 ROBO2Q9HCK4 1378 aa27.66■■■□□ 2.02
SAMD1-201ENST00000269724 TMEM132EQ6IEE7 984 aa27.66■■■□□ 2.02
SAMD1-201ENST00000269724 C14orf37Q86TY3 774 aa27.65■■■□□ 2.02
SAMD1-201ENST00000269724 SIRT1Q96EB6 747 aa27.65■■■□□ 2.02
SAMD1-201ENST00000269724 DCCP43146 1447 aa27.65■■■□□ 2.02
SAMD1-201ENST00000269724 CLSPNQ9HAW4 1339 aa27.65■■■□□ 2.02
SAMD1-201ENST00000269724 ADGRB1O14514 1584 aa27.65■■■□□ 2.02
SAMD1-201ENST00000269724 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.64■■■□□ 2.02
SAMD1-201ENST00000269724 ADGRL3Q9HAR2 1447 aa27.62■■■□□ 2.01
SAMD1-201ENST00000269724 CADPS2Q86UW7 1296 aa27.62■■■□□ 2.01
SAMD1-201ENST00000269724 FAM135BQ49AJ0 1406 aa27.61■■■□□ 2.01
SAMD1-201ENST00000269724 STK26Q9P289 416 aa27.6■■■□□ 2.01
SAMD1-201ENST00000269724 NALCNQ8IZF0 1738 aa27.59■■■□□ 2.01
SAMD1-201ENST00000269724 DLC1Q96QB1 1528 aa27.59■■■□□ 2.01
SAMD1-201ENST00000269724 ATF3P18847 181 aa27.59■■■□□ 2.01
SAMD1-201ENST00000269724 PIP4K2BP78356 416 aa27.58■■■□□ 2.01
SAMD1-201ENST00000269724 TONSLQ96HA7 1378 aa27.57■■■□□ 2
SAMD1-201ENST00000269724 SLAIN2Q9P270 581 aa27.56■■■□□ 2
SAMD1-201ENST00000269724 SCAF1Q9H7N4 1312 aaKnown RBP27.55■■■□□ 2
SAMD1-201ENST00000269724 WAPLQ7Z5K2 1190 aa27.51■■□□□ 1.99
SAMD1-201ENST00000269724 CDC42BPGQ6DT37 1551 aa27.5■■□□□ 1.99
SAMD1-201ENST00000269724 TRPM1Q7Z4N2 1603 aa27.49■■□□□ 1.99
SAMD1-201ENST00000269724 ROBO1Q9Y6N7 1651 aa27.49■■□□□ 1.99
SAMD1-201ENST00000269724 PLEKHH1Q9ULM0 1364 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms