RNA–Protein interactions for RNA: ENST00000269468.9

MBD1-201, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-201ENST00000269468 PLA2R1Q13018 1463 aa18.52■□□□□ 0.56
MBD1-201ENST00000269468 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.56
MBD1-201ENST00000269468 CLUAP1Q96AJ1 413 aa18.52■□□□□ 0.55
MBD1-201ENST00000269468 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
MBD1-201ENST00000269468 EIF3AQ14152 1382 aaKnown RBP18.51■□□□□ 0.55
MBD1-201ENST00000269468 PRDM15P57071 1507 aaPredicted RBP18.51■□□□□ 0.55
MBD1-201ENST00000269468 ADCY10Q96PN6 1610 aa18.51■□□□□ 0.55
MBD1-201ENST00000269468 NKTRP30414 1462 aaKnown RBP18.51■□□□□ 0.55
MBD1-201ENST00000269468 E9PSI1 815 aa18.5■□□□□ 0.55
MBD1-201ENST00000269468 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
MBD1-201ENST00000269468 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
MBD1-201ENST00000269468 ABCC10Q5T3U5 1492 aa18.49■□□□□ 0.55
MBD1-201ENST00000269468 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
MBD1-201ENST00000269468 L1TD1Q5T7N2 865 aaKnown RBP18.48■□□□□ 0.55
MBD1-201ENST00000269468 TRMT2AQ8IZ69 625 aaKnown RBP18.48■□□□□ 0.55
MBD1-201ENST00000269468 CGNL1Q0VF96 1302 aa18.48■□□□□ 0.55
MBD1-201ENST00000269468 MAPK8IP3Q9UPT6 1336 aa18.48■□□□□ 0.55
MBD1-201ENST00000269468 BCL2L13Q9BXK5 485 aa18.48■□□□□ 0.55
MBD1-201ENST00000269468 WDR7Q9Y4E6 1490 aa18.48■□□□□ 0.55
MBD1-201ENST00000269468 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
MBD1-201ENST00000269468 ATP10BO94823 1461 aa18.47■□□□□ 0.55
MBD1-201ENST00000269468 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
MBD1-201ENST00000269468 NAP1L5Q96NT1 182 aaPredicted RBP18.46■□□□□ 0.55
MBD1-201ENST00000269468 TNNQ9UQP3 1299 aa18.46■□□□□ 0.55
MBD1-201ENST00000269468 TBC1D2Q9BYX2 928 aa18.45■□□□□ 0.54
MBD1-201ENST00000269468 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
MBD1-201ENST00000269468 CCDC141Q6ZP82 1450 aa18.44■□□□□ 0.54
MBD1-201ENST00000269468 PANK2Q9BZ23 570 aa18.44■□□□□ 0.54
MBD1-201ENST00000269468 PDE3AQ14432 1141 aa18.44■□□□□ 0.54
MBD1-201ENST00000269468 CDCA8Q53HL2 280 aa18.43■□□□□ 0.54
MBD1-201ENST00000269468 ANTXR1Q9H6X2 564 aa18.43■□□□□ 0.54
MBD1-201ENST00000269468 GOLGA6L3A6NEY3 463 aa18.43■□□□□ 0.54
MBD1-201ENST00000269468 XRCC6P12956 609 aaKnown RBP eCLIP18.43■□□□□ 0.542e-6■■■■■ 29.9
MBD1-201ENST00000269468 IFT140Q96RY7 1462 aa18.43■□□□□ 0.54
MBD1-201ENST00000269468 PCDHB15Q9Y5E8 787 aa18.42■□□□□ 0.54
MBD1-201ENST00000269468 PDZRN3Q9UPQ7 1066 aa18.42■□□□□ 0.54
MBD1-201ENST00000269468 MYO5CQ9NQX4 1742 aa18.4■□□□□ 0.54
MBD1-201ENST00000269468 WWC1Q8IX03 1113 aa18.4■□□□□ 0.54
MBD1-201ENST00000269468 TBC1D32Q96NH3 1257 aa18.4■□□□□ 0.54
MBD1-201ENST00000269468 ASXL1Q8IXJ9 1541 aa18.39■□□□□ 0.54
MBD1-201ENST00000269468 RLBP1P12271 317 aa18.39■□□□□ 0.53
MBD1-201ENST00000269468 PNNQ9H307 717 aaKnown RBP18.38■□□□□ 0.53
MBD1-201ENST00000269468 PIK3C2GO75747 1445 aa18.38■□□□□ 0.53
MBD1-201ENST00000269468 PMFBP1Q8TBY8 1022 aa18.38■□□□□ 0.53
MBD1-201ENST00000269468 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
MBD1-201ENST00000269468 MFAP1P55081 439 aaKnown RBP18.38■□□□□ 0.53
MBD1-201ENST00000269468 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
MBD1-201ENST00000269468 MCM4P33991 863 aa18.37■□□□□ 0.53
MBD1-201ENST00000269468 SAMD9LQ8IVG5 1584 aa18.37■□□□□ 0.53
MBD1-201ENST00000269468 LAMC1P11047 1609 aa18.36■□□□□ 0.53
MBD1-201ENST00000269468 ARHGEF5Q12774 1597 aa18.36■□□□□ 0.53
MBD1-201ENST00000269468 NLRP1Q9C000 1473 aa18.36■□□□□ 0.53
MBD1-201ENST00000269468 SYCP2Q9BX26 1530 aa18.35■□□□□ 0.53
MBD1-201ENST00000269468 ABCA8O94911 1581 aa18.35■□□□□ 0.53
MBD1-201ENST00000269468 NUP160Q12769 1436 aa18.35■□□□□ 0.53
MBD1-201ENST00000269468 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
MBD1-201ENST00000269468 RARSP54136 660 aaKnown RBP18.34■□□□□ 0.53
MBD1-201ENST00000269468 VIRMAQ69YN4 1812 aaKnown RBP18.33■□□□□ 0.53
MBD1-201ENST00000269468 TRAK2O60296 914 aa18.33■□□□□ 0.53
MBD1-201ENST00000269468 CARD14Q9BXL6 1004 aa18.33■□□□□ 0.53
MBD1-201ENST00000269468 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.53
MBD1-201ENST00000269468 RWDD1Q9H446 243 aaPredicted RBP18.32■□□□□ 0.52
MBD1-201ENST00000269468 C22orf23Q9BZE7 217 aa18.31■□□□□ 0.52
MBD1-201ENST00000269468 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
MBD1-201ENST00000269468 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
MBD1-201ENST00000269468 ABCC2Q92887 1545 aa18.3■□□□□ 0.52
MBD1-201ENST00000269468 SCAF11Q99590 1463 aaKnown RBP18.29■□□□□ 0.52
MBD1-201ENST00000269468 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
MBD1-201ENST00000269468 CHMP5Q9NZZ3 219 aa18.29■□□□□ 0.52
MBD1-201ENST00000269468 CDC42BPBQ9Y5S2 1711 aa18.29■□□□□ 0.52
MBD1-201ENST00000269468 FSD2A1L4K1 749 aa18.29■□□□□ 0.52
MBD1-201ENST00000269468 SYNMO15061 1565 aa18.28■□□□□ 0.52
MBD1-201ENST00000269468 MORC1Q86VD1 984 aa18.28■□□□□ 0.52
MBD1-201ENST00000269468 FTSJ3Q8IY81 847 aaKnown RBP18.28■□□□□ 0.52
MBD1-201ENST00000269468 NINLQ9Y2I6 1382 aa18.28■□□□□ 0.52
MBD1-201ENST00000269468 VSIG10Q8N0Z9 540 aa18.27■□□□□ 0.52
MBD1-201ENST00000269468 HSP90AA1P07900 732 aaKnown RBP18.27■□□□□ 0.52
MBD1-201ENST00000269468 UNC13BO14795 1591 aa18.27■□□□□ 0.52
MBD1-201ENST00000269468 CLCN1P35523 988 aa18.26■□□□□ 0.51
MBD1-201ENST00000269468 GLIPR1L2Q4G1C9 344 aa18.26■□□□□ 0.51
MBD1-201ENST00000269468 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
MBD1-201ENST00000269468 HSP90AA2PQ14568 343 aaPredicted RBP18.25■□□□□ 0.51
MBD1-201ENST00000269468 RUNDC1Q96C34 613 aa18.25■□□□□ 0.51
MBD1-201ENST00000269468 RNF17Q9BXT8 1623 aaKnown RBP18.25■□□□□ 0.51
MBD1-201ENST00000269468 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
MBD1-201ENST00000269468 NPC1L1Q9UHC9 1359 aa18.24■□□□□ 0.51
MBD1-201ENST00000269468 MRE11P49959 708 aa18.24■□□□□ 0.51
MBD1-201ENST00000269468 NGEFQ8N5V2 710 aa18.24■□□□□ 0.51
MBD1-201ENST00000269468 IQGAP3Q86VI3 1631 aa18.24■□□□□ 0.51
MBD1-201ENST00000269468 GRPEL1Q9HAV7 217 aa18.24■□□□□ 0.51
MBD1-201ENST00000269468 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
MBD1-201ENST00000269468 PREX2Q70Z35 1606 aa18.22■□□□□ 0.51
MBD1-201ENST00000269468 MADDQ8WXG6 1647 aa18.22■□□□□ 0.51
MBD1-201ENST00000269468 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
MBD1-201ENST00000269468 IQGAP1P46940 1657 aa18.21■□□□□ 0.51
MBD1-201ENST00000269468 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
MBD1-201ENST00000269468 PKNOX2Q96KN3 472 aa18.21■□□□□ 0.51
MBD1-201ENST00000269468 ITPRIPQ8IWB1 547 aa18.2■□□□□ 0.5
MBD1-201ENST00000269468 TRIM44Q96DX7 344 aaPredicted RBP18.2■□□□□ 0.5
MBD1-201ENST00000269468 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms