RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 CHMP5Q9NZZ3 219 aa12.55□□□□□ -0.4
LAMA3-201ENST00000269217 DIAPH3Q9NSV4 1193 aa12.55□□□□□ -0.4
LAMA3-201ENST00000269217 RIPK4P57078 832 aa12.54□□□□□ -0.4
LAMA3-201ENST00000269217 GOLGA6L1Q8N7Z2 621 aa12.54□□□□□ -0.4
LAMA3-201ENST00000269217 TEFQ10587 303 aa12.54□□□□□ -0.4
LAMA3-201ENST00000269217 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
LAMA3-201ENST00000269217 TPM3P06753 285 aa12.53□□□□□ -0.4
LAMA3-201ENST00000269217 BRD4O60885 1362 aaPredicted RBP12.53□□□□□ -0.4
LAMA3-201ENST00000269217 GOLGA6L19H0YKK7 550 aa12.53□□□□□ -0.4
LAMA3-201ENST00000269217 LRRFIP1Q32MZ4 808 aaKnown RBP12.52□□□□□ -0.4
LAMA3-201ENST00000269217 NEXNQ0ZGT2 675 aa12.52□□□□□ -0.41
LAMA3-201ENST00000269217 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.41
LAMA3-201ENST00000269217 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
LAMA3-201ENST00000269217 HSP90AA2PQ14568 343 aaPredicted RBP12.51□□□□□ -0.41
LAMA3-201ENST00000269217 BECN2A8MW95 431 aa12.51□□□□□ -0.41
LAMA3-201ENST00000269217 ANKRD50Q9ULJ7 1429 aa12.51□□□□□ -0.41
LAMA3-201ENST00000269217 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
LAMA3-201ENST00000269217 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
LAMA3-201ENST00000269217 FRAT2O75474 233 aaPredicted RBP12.5□□□□□ -0.41
LAMA3-201ENST00000269217 C9orf78Q9NZ63 289 aaPredicted RBP12.5□□□□□ -0.41
LAMA3-201ENST00000269217 GNAI1P63096 354 aa12.5□□□□□ -0.41
LAMA3-201ENST00000269217 CREBRFQ8IUR6 639 aa12.5□□□□□ -0.41
LAMA3-201ENST00000269217 ZNF644Q9H582 1327 aaPredicted RBP12.49□□□□□ -0.41
LAMA3-201ENST00000269217 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
LAMA3-201ENST00000269217 WASHC2AQ641Q2 1341 aa12.49□□□□□ -0.41
LAMA3-201ENST00000269217 RAD54L2Q9Y4B4 1467 aa12.49□□□□□ -0.41
LAMA3-201ENST00000269217 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
LAMA3-201ENST00000269217 FOXD4L6Q3SYB3 417 aaPredicted RBP12.49□□□□□ -0.41
LAMA3-201ENST00000269217 FOXD4L3Q6VB84 417 aaPredicted RBP12.49□□□□□ -0.41
LAMA3-201ENST00000269217 CPLX2Q6PUV4 134 aaKnown RBP12.49□□□□□ -0.41
LAMA3-201ENST00000269217 IFIT2P09913 472 aaKnown RBP12.48□□□□□ -0.41
LAMA3-201ENST00000269217 TNNT3P45378 269 aaPredicted RBP12.48□□□□□ -0.41
LAMA3-201ENST00000269217 NUCB2P80303 420 aa12.48□□□□□ -0.41
LAMA3-201ENST00000269217 EIF2S2P20042 333 aaKnown RBP12.48□□□□□ -0.41
LAMA3-201ENST00000269217 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
LAMA3-201ENST00000269217 ERICH3Q5RHP9 1530 aa12.48□□□□□ -0.41
LAMA3-201ENST00000269217 AKAP17AQ02040 695 aaKnown RBP12.48□□□□□ -0.41
LAMA3-201ENST00000269217 TPD52L1Q16890 204 aaPredicted RBP12.48□□□□□ -0.41
LAMA3-201ENST00000269217 SYNE3Q6ZMZ3 975 aa12.47□□□□□ -0.41
LAMA3-201ENST00000269217 TTC5Q8N0Z6 440 aa12.47□□□□□ -0.41
LAMA3-201ENST00000269217 RRBP1Q9P2E9 1410 aaKnown RBP12.47□□□□□ -0.41
LAMA3-201ENST00000269217 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
LAMA3-201ENST00000269217 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
LAMA3-201ENST00000269217 DDX58O95786 925 aaKnown RBP12.47□□□□□ -0.41
LAMA3-201ENST00000269217 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
LAMA3-201ENST00000269217 FKBP5Q13451 457 aaPredicted RBP12.46□□□□□ -0.41
LAMA3-201ENST00000269217 MCTP1Q6DN14 999 aa12.46□□□□□ -0.41
LAMA3-201ENST00000269217 G3V3G9 751 aa12.46□□□□□ -0.41
LAMA3-201ENST00000269217 MARCH6O60337 910 aa12.46□□□□□ -0.41
LAMA3-201ENST00000269217 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
LAMA3-201ENST00000269217 PRDM2Q13029 1718 aa12.46□□□□□ -0.41
LAMA3-201ENST00000269217 TSR1Q2NL82 804 aaKnown RBP12.46□□□□□ -0.41
LAMA3-201ENST00000269217 HSP90AB4PQ58FF6 505 aa12.46□□□□□ -0.42
LAMA3-201ENST00000269217 TPM1P09493 284 aa12.46□□□□□ -0.42
LAMA3-201ENST00000269217 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.46□□□□□ -0.42
LAMA3-201ENST00000269217 LNPKQ9C0E8 428 aa12.46□□□□□ -0.42
LAMA3-201ENST00000269217 A0A0U1RQG5 324 aaPredicted RBP12.45□□□□□ -0.42
LAMA3-201ENST00000269217 PANK1Q8TE04 598 aa12.44□□□□□ -0.42
LAMA3-201ENST00000269217 PES1O00541 588 aaKnown RBP12.44□□□□□ -0.42
LAMA3-201ENST00000269217 G3BP1Q13283 466 aaKnown RBP eCLIP12.44□□□□□ -0.42
LAMA3-201ENST00000269217 TRIM29Q14134 588 aa12.44□□□□□ -0.42
LAMA3-201ENST00000269217 ADAMTS8Q9UP79 889 aa12.44□□□□□ -0.42
LAMA3-201ENST00000269217 TSPYL4Q9UJ04 414 aa12.44□□□□□ -0.42
LAMA3-201ENST00000269217 CDC45O75419 566 aa12.43□□□□□ -0.42
LAMA3-201ENST00000269217 TPM2P07951 284 aa12.43□□□□□ -0.42
LAMA3-201ENST00000269217 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
LAMA3-201ENST00000269217 SMC3Q9UQE7 1217 aa12.43□□□□□ -0.42
LAMA3-201ENST00000269217 ERC2O15083 957 aa12.43□□□□□ -0.42
LAMA3-201ENST00000269217 CEP89Q96ST8 783 aa12.43□□□□□ -0.42
LAMA3-201ENST00000269217 NFKBIBQ15653 356 aa12.42□□□□□ -0.42
LAMA3-201ENST00000269217 CPLX1O14810 134 aa12.42□□□□□ -0.42
LAMA3-201ENST00000269217 BICD2Q8TD16 824 aa12.42□□□□□ -0.42
LAMA3-201ENST00000269217 ARAP1Q96P48 1450 aa12.42□□□□□ -0.42
LAMA3-201ENST00000269217 GGNBP2Q9H3C7 697 aa12.42□□□□□ -0.42
LAMA3-201ENST00000269217 HMOX1P09601 288 aa12.41□□□□□ -0.42
LAMA3-201ENST00000269217 TRDNQ13061 729 aa12.4□□□□□ -0.42
LAMA3-201ENST00000269217 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.42
LAMA3-201ENST00000269217 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.4□□□□□ -0.42
LAMA3-201ENST00000269217 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
LAMA3-201ENST00000269217 PPP2R1AP30153 589 aa12.4□□□□□ -0.42
LAMA3-201ENST00000269217 EVA1CP58658 441 aa12.4□□□□□ -0.42
LAMA3-201ENST00000269217 GPS2Q13227 327 aa12.4□□□□□ -0.42
LAMA3-201ENST00000269217 HOOK1Q9UJC3 728 aaKnown RBP12.4□□□□□ -0.42
LAMA3-201ENST00000269217 VPS53Q5VIR6 699 aa12.4□□□□□ -0.42
LAMA3-201ENST00000269217 SCAPERQ9BY12 1400 aa12.4□□□□□ -0.42
LAMA3-201ENST00000269217 NCAPD3P42695 1498 aa12.4□□□□□ -0.43
LAMA3-201ENST00000269217 MTHFSP49914 203 aa12.4□□□□□ -0.43
LAMA3-201ENST00000269217 CCAR2Q8N163 923 aaKnown RBP12.4□□□□□ -0.43
LAMA3-201ENST00000269217 TCP11L2Q8N4U5 519 aa12.4□□□□□ -0.43
LAMA3-201ENST00000269217 HFM1A2PYH4 1435 aa12.39□□□□□ -0.43
LAMA3-201ENST00000269217 PSME1Q06323 249 aa12.39□□□□□ -0.43
LAMA3-201ENST00000269217 CCDC70Q6NSX1 233 aa12.39□□□□□ -0.43
LAMA3-201ENST00000269217 AMOTL1Q8IY63 956 aa12.39□□□□□ -0.43
LAMA3-201ENST00000269217 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
LAMA3-201ENST00000269217 CDCA7LQ96GN5 454 aa12.39□□□□□ -0.43
LAMA3-201ENST00000269217 EFCAB5A4FU69 1503 aa12.38□□□□□ -0.43
LAMA3-201ENST00000269217 APPP05067 770 aa12.38□□□□□ -0.43
LAMA3-201ENST00000269217 ANKRD20A12PQ8NF67 263 aa12.38□□□□□ -0.43
LAMA3-201ENST00000269217 ZNF592Q92610 1267 aa12.38□□□□□ -0.43
LAMA3-201ENST00000269217 MRE11P49959 708 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms