RNA–Protein interactions for RNA: ENST00000266674.9

LGR5-201, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGR5, Length 4,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-201ENST00000266674 FANCD2Q9BXW9 1451 aa17.03■□□□□ 0.32
LGR5-201ENST00000266674 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
LGR5-201ENST00000266674 RIPK4P57078 832 aa17.03■□□□□ 0.32
LGR5-201ENST00000266674 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
LGR5-201ENST00000266674 NASPP49321 788 aaPredicted RBP17.02■□□□□ 0.32
LGR5-201ENST00000266674 API5Q9BZZ5 524 aaKnown RBP17.02■□□□□ 0.32
LGR5-201ENST00000266674 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.31
LGR5-201ENST00000266674 MCTP1Q6DN14 999 aa17.02■□□□□ 0.31
LGR5-201ENST00000266674 ANKRD50Q9ULJ7 1429 aa17.01■□□□□ 0.31
LGR5-201ENST00000266674 KIF3AQ9Y496 699 aa17.01■□□□□ 0.31
LGR5-201ENST00000266674 GOLGA6L19H0YKK7 550 aa17■□□□□ 0.31
LGR5-201ENST00000266674 PDE3AQ14432 1141 aa17■□□□□ 0.31
LGR5-201ENST00000266674 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
LGR5-201ENST00000266674 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
LGR5-201ENST00000266674 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
LGR5-201ENST00000266674 INTS3Q68E01 1043 aaKnown RBP16.99■□□□□ 0.31
LGR5-201ENST00000266674 PDZRN3Q9UPQ7 1066 aa16.99■□□□□ 0.31
LGR5-201ENST00000266674 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
LGR5-201ENST00000266674 BECN2A8MW95 431 aa16.98■□□□□ 0.31
LGR5-201ENST00000266674 SF3A1Q15459 793 aaKnown RBP16.98■□□□□ 0.31
LGR5-201ENST00000266674 CCDC34Q96HJ3 373 aa16.98■□□□□ 0.31
LGR5-201ENST00000266674 PRXQ9BXM0 1461 aa16.98■□□□□ 0.31
LGR5-201ENST00000266674 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
LGR5-201ENST00000266674 R3HCC1Q9Y3T6 440 aaKnown RBP16.97■□□□□ 0.31
LGR5-201ENST00000266674 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
LGR5-201ENST00000266674 ANO2Q9NQ90 1003 aa16.97■□□□□ 0.31
LGR5-201ENST00000266674 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
LGR5-201ENST00000266674 H3BQV1 296 aa16.96■□□□□ 0.31
LGR5-201ENST00000266674 AMPHP49418 695 aa16.96■□□□□ 0.31
LGR5-201ENST00000266674 IFFO2Q5TF58 517 aa16.96■□□□□ 0.31
LGR5-201ENST00000266674 CFTRP13569 1480 aa16.95■□□□□ 0.3
LGR5-201ENST00000266674 GORABQ5T7V8 394 aa16.95■□□□□ 0.3
LGR5-201ENST00000266674 BCAR3O75815 825 aa16.95■□□□□ 0.3
LGR5-201ENST00000266674 RAD54L2Q9Y4B4 1467 aa16.95■□□□□ 0.3
LGR5-201ENST00000266674 CDC45O75419 566 aa16.94■□□□□ 0.3
LGR5-201ENST00000266674 GOLGA6L1Q8N7Z2 621 aa16.94■□□□□ 0.3
LGR5-201ENST00000266674 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
LGR5-201ENST00000266674 DIAPH3Q9NSV4 1193 aa16.94■□□□□ 0.3
LGR5-201ENST00000266674 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
LGR5-201ENST00000266674 ZNF771Q7L3S4 317 aaPredicted RBP16.94■□□□□ 0.3
LGR5-201ENST00000266674 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
LGR5-201ENST00000266674 FAM184AQ8NB25 1140 aa16.93■□□□□ 0.3
LGR5-201ENST00000266674 ZNF592Q92610 1267 aa16.93■□□□□ 0.3
LGR5-201ENST00000266674 COG3Q96JB2 828 aa16.93■□□□□ 0.3
LGR5-201ENST00000266674 TPM2P07951 284 aa16.93■□□□□ 0.3
LGR5-201ENST00000266674 ROCK1Q13464 1354 aa16.93■□□□□ 0.3
LGR5-201ENST00000266674 MINK1Q8N4C8 1332 aaPredicted RBP16.92■□□□□ 0.3
LGR5-201ENST00000266674 ZKSCAN1P17029 563 aaPredicted RBP16.92■□□□□ 0.3
LGR5-201ENST00000266674 NBPF1Q3BBV0 1214 aa16.92■□□□□ 0.3
LGR5-201ENST00000266674 CAVIN1Q6NZI2 390 aaKnown RBP16.92■□□□□ 0.3
LGR5-201ENST00000266674 MTERF4Q7Z6M4 381 aaKnown RBP16.92■□□□□ 0.3
LGR5-201ENST00000266674 RNF214Q8ND24 703 aa16.92■□□□□ 0.3
LGR5-201ENST00000266674 RUFY2Q8WXA3 655 aa16.92■□□□□ 0.3
LGR5-201ENST00000266674 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
LGR5-201ENST00000266674 GNAI1P63096 354 aa16.91■□□□□ 0.3
LGR5-201ENST00000266674 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
LGR5-201ENST00000266674 CCDC39Q9UFE4 941 aa16.91■□□□□ 0.3
LGR5-201ENST00000266674 MTHFSP49914 203 aa16.91■□□□□ 0.3
LGR5-201ENST00000266674 TIAM1Q13009 1591 aa16.9■□□□□ 0.3
LGR5-201ENST00000266674 PTPRGP23470 1445 aa16.9■□□□□ 0.3
LGR5-201ENST00000266674 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
LGR5-201ENST00000266674 NPHP1O15259 732 aa16.9■□□□□ 0.3
LGR5-201ENST00000266674 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
LGR5-201ENST00000266674 CCDC173Q0VFZ6 552 aa16.89■□□□□ 0.29
LGR5-201ENST00000266674 SMC3Q9UQE7 1217 aa16.89■□□□□ 0.29
LGR5-201ENST00000266674 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
LGR5-201ENST00000266674 VPS37CA5D8V6 355 aaPredicted RBP16.88■□□□□ 0.29
LGR5-201ENST00000266674 MCM4P33991 863 aa16.88■□□□□ 0.29
LGR5-201ENST00000266674 GRPEL1Q9HAV7 217 aa16.88■□□□□ 0.29
LGR5-201ENST00000266674 KIAA1107Q9UPP5 1409 aa16.88■□□□□ 0.29
LGR5-201ENST00000266674 MBD3O95983 291 aa16.87■□□□□ 0.29
LGR5-201ENST00000266674 BICD2Q8TD16 824 aa16.87■□□□□ 0.29
LGR5-201ENST00000266674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.87■□□□□ 0.29
LGR5-201ENST00000266674 TPM3P06753 285 aa16.87■□□□□ 0.29
LGR5-201ENST00000266674 CHMP4CQ96CF2 233 aa16.87■□□□□ 0.29
LGR5-201ENST00000266674 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
LGR5-201ENST00000266674 C11orf95C9JLR9 678 aaPredicted RBP16.86■□□□□ 0.29
LGR5-201ENST00000266674 GGNBP2Q9H3C7 697 aa16.86■□□□□ 0.29
LGR5-201ENST00000266674 CCAR2Q8N163 923 aaKnown RBP16.85■□□□□ 0.29
LGR5-201ENST00000266674 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
LGR5-201ENST00000266674 ESPNB1AK53 854 aa16.85■□□□□ 0.29
LGR5-201ENST00000266674 PRPF40AO75400 957 aaKnown RBP16.85■□□□□ 0.29
LGR5-201ENST00000266674 RABEP1Q15276 862 aa16.85■□□□□ 0.29
LGR5-201ENST00000266674 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
LGR5-201ENST00000266674 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
LGR5-201ENST00000266674 CREBRFQ8IUR6 639 aa16.84■□□□□ 0.29
LGR5-201ENST00000266674 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
LGR5-201ENST00000266674 NAIPQ13075 1403 aa16.84■□□□□ 0.29
LGR5-201ENST00000266674 IFT57Q9NWB7 429 aa16.84■□□□□ 0.29
LGR5-201ENST00000266674 HMOX1P09601 288 aa16.84■□□□□ 0.29
LGR5-201ENST00000266674 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.82■□□□□ 0.28
LGR5-201ENST00000266674 SASS6Q6UVJ0 657 aa16.82■□□□□ 0.28
LGR5-201ENST00000266674 PKNOX2Q96KN3 472 aa16.82■□□□□ 0.28
LGR5-201ENST00000266674 NEK4P51957 841 aa16.82■□□□□ 0.28
LGR5-201ENST00000266674 GCC1Q96CN9 775 aa16.82■□□□□ 0.28
LGR5-201ENST00000266674 IFIT2P09913 472 aaKnown RBP16.81■□□□□ 0.28
LGR5-201ENST00000266674 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
LGR5-201ENST00000266674 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
LGR5-201ENST00000266674 NOC3LQ8WTT2 800 aaKnown RBP16.81■□□□□ 0.28
LGR5-201ENST00000266674 CFAP70Q5T0N1 1121 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1051.4 ms