RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
CDH3-201ENST00000264012 HECW1Q76N89 1606 aa17.42■□□□□ 0.38
CDH3-201ENST00000264012 PTMSP20962 102 aa17.42■□□□□ 0.38
CDH3-201ENST00000264012 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
CDH3-201ENST00000264012 GNL2Q13823 731 aaKnown RBP17.42■□□□□ 0.38
CDH3-201ENST00000264012 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
CDH3-201ENST00000264012 PLEKHH2Q8IVE3 1493 aa17.41■□□□□ 0.38
CDH3-201ENST00000264012 DDX19BQ9UMR2 479 aa17.4■□□□□ 0.38
CDH3-201ENST00000264012 KIAA0586Q9BVV6 1533 aa17.4■□□□□ 0.38
CDH3-201ENST00000264012 DZIP1LQ8IYY4 767 aaKnown RBP17.39■□□□□ 0.38
CDH3-201ENST00000264012 ADAMTS8Q9UP79 889 aa17.39■□□□□ 0.37
CDH3-201ENST00000264012 DAPK1P53355 1430 aa17.39■□□□□ 0.37
CDH3-201ENST00000264012 SCAPERQ9BY12 1400 aa17.39■□□□□ 0.37
CDH3-201ENST00000264012 PSME1Q06323 249 aa17.39■□□□□ 0.37
CDH3-201ENST00000264012 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
CDH3-201ENST00000264012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDH3-201ENST00000264012 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
CDH3-201ENST00000264012 HMOX1P09601 288 aa17.37■□□□□ 0.37
CDH3-201ENST00000264012 NOL8Q76FK4 1167 aaKnown RBP17.37■□□□□ 0.37
CDH3-201ENST00000264012 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
CDH3-201ENST00000264012 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
CDH3-201ENST00000264012 MTHFSP49914 203 aa17.37■□□□□ 0.37
CDH3-201ENST00000264012 EPRSP07814 1512 aaKnown RBP17.37■□□□□ 0.37
CDH3-201ENST00000264012 EIF2S2P20042 333 aaKnown RBP17.36■□□□□ 0.37
CDH3-201ENST00000264012 ST18O60284 1047 aa17.36■□□□□ 0.37
CDH3-201ENST00000264012 MSNP26038 577 aaKnown RBP17.36■□□□□ 0.37
CDH3-201ENST00000264012 CDK13Q14004 1512 aaKnown RBP17.35■□□□□ 0.37
CDH3-201ENST00000264012 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
CDH3-201ENST00000264012 GNAI1P63096 354 aa17.35■□□□□ 0.37
CDH3-201ENST00000264012 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
CDH3-201ENST00000264012 DRC7Q8IY82 874 aa17.34■□□□□ 0.37
CDH3-201ENST00000264012 RILPL2Q969X0 211 aa17.34■□□□□ 0.37
CDH3-201ENST00000264012 SUPT6HQ7KZ85 1726 aaKnown RBP17.33■□□□□ 0.37
CDH3-201ENST00000264012 NAIPQ13075 1403 aa17.33■□□□□ 0.36
CDH3-201ENST00000264012 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
CDH3-201ENST00000264012 HSP90B1P14625 803 aaKnown RBP17.33■□□□□ 0.36
CDH3-201ENST00000264012 NECTIN2Q92692 538 aa17.33■□□□□ 0.36
CDH3-201ENST00000264012 SYAP1Q96A49 352 aaPredicted RBP17.33■□□□□ 0.36
CDH3-201ENST00000264012 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
CDH3-201ENST00000264012 EVA1CP58658 441 aa17.32■□□□□ 0.36
CDH3-201ENST00000264012 TTC5Q8N0Z6 440 aa17.32■□□□□ 0.36
CDH3-201ENST00000264012 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
CDH3-201ENST00000264012 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
CDH3-201ENST00000264012 NEXNQ0ZGT2 675 aa17.31■□□□□ 0.36
CDH3-201ENST00000264012 SLC4A3P48751 1232 aa17.31■□□□□ 0.36
CDH3-201ENST00000264012 PRAM1Q96QH2 718 aa17.31■□□□□ 0.36
CDH3-201ENST00000264012 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
CDH3-201ENST00000264012 CDCA7LQ96GN5 454 aa17.3■□□□□ 0.36
CDH3-201ENST00000264012 C9orf78Q9NZ63 289 aaPredicted RBP17.3■□□□□ 0.36
CDH3-201ENST00000264012 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
CDH3-201ENST00000264012 IQGAP2Q13576 1575 aa17.3■□□□□ 0.36
CDH3-201ENST00000264012 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
CDH3-201ENST00000264012 SLC12A5Q9H2X9 1139 aa17.3■□□□□ 0.36
CDH3-201ENST00000264012 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
CDH3-201ENST00000264012 TSPYL4Q9UJ04 414 aa17.29■□□□□ 0.36
CDH3-201ENST00000264012 ROCK1Q13464 1354 aa17.29■□□□□ 0.36
CDH3-201ENST00000264012 RAPGEF3O95398 923 aa17.29■□□□□ 0.36
CDH3-201ENST00000264012 NLRP6P59044 892 aa17.29■□□□□ 0.36
CDH3-201ENST00000264012 PANK1Q8TE04 598 aa17.28■□□□□ 0.36
CDH3-201ENST00000264012 SLC52A1Q9NWF4 448 aa17.28■□□□□ 0.36
CDH3-201ENST00000264012 TXNDC2Q86VQ3 553 aa17.28■□□□□ 0.36
CDH3-201ENST00000264012 PCF11O94913 1555 aaKnown RBP17.28■□□□□ 0.36
CDH3-201ENST00000264012 GOLGA6L3A6NEY3 463 aa17.28■□□□□ 0.36
CDH3-201ENST00000264012 NUTM2GQ5VZR2 741 aa17.28■□□□□ 0.36
CDH3-201ENST00000264012 TMX4Q9H1E5 349 aaPredicted RBP17.27■□□□□ 0.36
CDH3-201ENST00000264012 FRAT2O75474 233 aaPredicted RBP17.25■□□□□ 0.35
CDH3-201ENST00000264012 DDX58O95786 925 aaKnown RBP17.24■□□□□ 0.35
CDH3-201ENST00000264012 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
CDH3-201ENST00000264012 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
CDH3-201ENST00000264012 ATF3P18847 181 aa17.24■□□□□ 0.35
CDH3-201ENST00000264012 AAMPQ13685 434 aa17.24■□□□□ 0.35
CDH3-201ENST00000264012 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
CDH3-201ENST00000264012 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
CDH3-201ENST00000264012 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
CDH3-201ENST00000264012 TOMM22Q9NS69 142 aa17.24■□□□□ 0.35
CDH3-201ENST00000264012 DIAPH3Q9NSV4 1193 aa17.24■□□□□ 0.35
CDH3-201ENST00000264012 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
CDH3-201ENST00000264012 PNISRQ8TF01 805 aaKnown RBP17.23■□□□□ 0.35
CDH3-201ENST00000264012 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
CDH3-201ENST00000264012 REC8O95072 547 aa17.23■□□□□ 0.35
CDH3-201ENST00000264012 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
CDH3-201ENST00000264012 CUL7Q14999 1698 aa17.23■□□□□ 0.35
CDH3-201ENST00000264012 PLB1Q6P1J6 1458 aa17.23■□□□□ 0.35
CDH3-201ENST00000264012 LNPKQ9C0E8 428 aa17.23■□□□□ 0.35
CDH3-201ENST00000264012 ERBINQ96RT1 1412 aa17.22■□□□□ 0.35
CDH3-201ENST00000264012 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
CDH3-201ENST00000264012 KIF3AQ9Y496 699 aa17.22■□□□□ 0.35
CDH3-201ENST00000264012 DDX11L8A8MPP1 907 aa17.21■□□□□ 0.35
CDH3-201ENST00000264012 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
CDH3-201ENST00000264012 CDK19Q9BWU1 502 aa17.21■□□□□ 0.34
CDH3-201ENST00000264012 NLRP2Q9NX02 1062 aa17.21■□□□□ 0.34
CDH3-201ENST00000264012 CABP1Q9NZU7 370 aa17.21■□□□□ 0.34
CDH3-201ENST00000264012 ANKRD30BQ9BXX2 1392 aa17.2■□□□□ 0.34
CDH3-201ENST00000264012 CCDC141Q6ZP82 1450 aa17.2■□□□□ 0.34
CDH3-201ENST00000264012 IFIT2P09913 472 aaKnown RBP17.2■□□□□ 0.34
CDH3-201ENST00000264012 RPGRIP1LQ68CZ1 1315 aa17.2■□□□□ 0.34
CDH3-201ENST00000264012 RUFY2Q8WXA3 655 aa17.2■□□□□ 0.34
CDH3-201ENST00000264012 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
CDH3-201ENST00000264012 MAP3K1Q13233 1512 aa17.19■□□□□ 0.34
CDH3-201ENST00000264012 GRIN2AQ12879 1464 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms