RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 AAMPQ13685 434 aa15.93■□□□□ 0.14
CHMP2B-201ENST00000263780 PDE3AQ14432 1141 aa15.93■□□□□ 0.14
CHMP2B-201ENST00000263780 SYNJ2O15056 1496 aa15.93■□□□□ 0.14
CHMP2B-201ENST00000263780 UPF2Q9HAU5 1272 aaKnown RBP15.93■□□□□ 0.14
CHMP2B-201ENST00000263780 HNRNPMP52272 730 aaKnown RBP eCLIP15.92■□□□□ 0.14
CHMP2B-201ENST00000263780 ZMYM3Q14202 1370 aa15.91■□□□□ 0.14
CHMP2B-201ENST00000263780 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
CHMP2B-201ENST00000263780 USP19O94966 1318 aa15.9■□□□□ 0.14
CHMP2B-201ENST00000263780 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
CHMP2B-201ENST00000263780 PLA2R1Q13018 1463 aa15.89■□□□□ 0.13
CHMP2B-201ENST00000263780 WDR7Q9Y4E6 1490 aa15.89■□□□□ 0.13
CHMP2B-201ENST00000263780 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
CHMP2B-201ENST00000263780 STAC3Q96MF2 364 aa15.88■□□□□ 0.13
CHMP2B-201ENST00000263780 POGKQ9P215 609 aa15.88■□□□□ 0.13
CHMP2B-201ENST00000263780 ATP10AO60312 1499 aa15.88■□□□□ 0.13
CHMP2B-201ENST00000263780 MAGI2Q86UL8 1455 aa15.87■□□□□ 0.13
CHMP2B-201ENST00000263780 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
CHMP2B-201ENST00000263780 GLIPR1L2Q4G1C9 344 aa15.87■□□□□ 0.13
CHMP2B-201ENST00000263780 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
CHMP2B-201ENST00000263780 CLUAP1Q96AJ1 413 aa15.87■□□□□ 0.13
CHMP2B-201ENST00000263780 ASXL1Q8IXJ9 1541 aa15.87■□□□□ 0.13
CHMP2B-201ENST00000263780 UNC13BO14795 1591 aa15.86■□□□□ 0.13
CHMP2B-201ENST00000263780 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
CHMP2B-201ENST00000263780 ATP10BO94823 1461 aa15.86■□□□□ 0.13
CHMP2B-201ENST00000263780 IGHDP01880 384 aa15.86■□□□□ 0.13
CHMP2B-201ENST00000263780 CHMP7Q8WUX9 453 aaPredicted RBP15.85■□□□□ 0.13
CHMP2B-201ENST00000263780 ABCA8O94911 1581 aa15.85■□□□□ 0.13
CHMP2B-201ENST00000263780 JPH4Q96JJ6 628 aa15.85■□□□□ 0.13
CHMP2B-201ENST00000263780 SYNMO15061 1565 aa15.85■□□□□ 0.13
CHMP2B-201ENST00000263780 BCAR3O75815 825 aa15.84■□□□□ 0.13
CHMP2B-201ENST00000263780 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
CHMP2B-201ENST00000263780 ANTXR1Q9H6X2 564 aa15.84■□□□□ 0.13
CHMP2B-201ENST00000263780 CENPJQ9HC77 1338 aaPredicted RBP15.84■□□□□ 0.13
CHMP2B-201ENST00000263780 RNF17Q9BXT8 1623 aaKnown RBP15.84■□□□□ 0.13
CHMP2B-201ENST00000263780 GOLGA6L3A6NEY3 463 aa15.83■□□□□ 0.13
CHMP2B-201ENST00000263780 APAF1O14727 1248 aa15.83■□□□□ 0.13
CHMP2B-201ENST00000263780 SLKQ9H2G2 1235 aaPredicted RBP15.82■□□□□ 0.12
CHMP2B-201ENST00000263780 MAST1Q9Y2H9 1570 aa15.82■□□□□ 0.12
CHMP2B-201ENST00000263780 IQGAP3Q86VI3 1631 aa15.82■□□□□ 0.12
CHMP2B-201ENST00000263780 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
CHMP2B-201ENST00000263780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHMP2B-201ENST00000263780 RRAGDQ9NQL2 400 aaPredicted RBP15.81■□□□□ 0.12
CHMP2B-201ENST00000263780 MYO5CQ9NQX4 1742 aa15.81■□□□□ 0.12
CHMP2B-201ENST00000263780 CCDC146Q8IYE0 955 aa15.81■□□□□ 0.12
CHMP2B-201ENST00000263780 PLXNC1O60486 1568 aa15.8■□□□□ 0.12
CHMP2B-201ENST00000263780 SEC24BO95487 1268 aa15.8■□□□□ 0.12
CHMP2B-201ENST00000263780 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
CHMP2B-201ENST00000263780 SCAF11Q99590 1463 aaKnown RBP15.79■□□□□ 0.12
CHMP2B-201ENST00000263780 SAMD9LQ8IVG5 1584 aa15.79■□□□□ 0.12
CHMP2B-201ENST00000263780 PNNQ9H307 717 aaKnown RBP15.79■□□□□ 0.12
CHMP2B-201ENST00000263780 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
CHMP2B-201ENST00000263780 NLRP1Q9C000 1473 aa15.78■□□□□ 0.12
CHMP2B-201ENST00000263780 FSD2A1L4K1 749 aa15.78■□□□□ 0.12
CHMP2B-201ENST00000263780 CLCN1P35523 988 aa15.78■□□□□ 0.12
CHMP2B-201ENST00000263780 ISY1Q9ULR0 285 aaKnown RBP15.78■□□□□ 0.12
CHMP2B-201ENST00000263780 COG6Q9Y2V7 657 aa15.78■□□□□ 0.12
CHMP2B-201ENST00000263780 MCM4P33991 863 aa15.77■□□□□ 0.12
CHMP2B-201ENST00000263780 TBC1D2Q9BYX2 928 aa15.77■□□□□ 0.12
CHMP2B-201ENST00000263780 RWDD1Q9H446 243 aaPredicted RBP15.77■□□□□ 0.12
CHMP2B-201ENST00000263780 PREX2Q70Z35 1606 aa15.77■□□□□ 0.11
CHMP2B-201ENST00000263780 CHMP5Q9NZZ3 219 aa15.76■□□□□ 0.11
CHMP2B-201ENST00000263780 XRCC6P12956 609 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHMP2B-201ENST00000263780 IQGAP1P46940 1657 aa15.75■□□□□ 0.11
CHMP2B-201ENST00000263780 MRE11P49959 708 aa15.75■□□□□ 0.11
CHMP2B-201ENST00000263780 PANK1Q8TE04 598 aa15.75■□□□□ 0.11
CHMP2B-201ENST00000263780 DUOX2Q9NRD8 1548 aa15.75■□□□□ 0.11
CHMP2B-201ENST00000263780 WWC1Q8IX03 1113 aa15.74■□□□□ 0.11
CHMP2B-201ENST00000263780 NAP1L5Q96NT1 182 aaPredicted RBP15.73■□□□□ 0.11
CHMP2B-201ENST00000263780 PDZRN3Q9UPQ7 1066 aa15.72■□□□□ 0.11
CHMP2B-201ENST00000263780 MADDQ8WXG6 1647 aa15.72■□□□□ 0.11
CHMP2B-201ENST00000263780 POLR3AO14802 1390 aaPredicted RBP15.72■□□□□ 0.11
CHMP2B-201ENST00000263780 DDX11L8A8MPP1 907 aa15.72■□□□□ 0.11
CHMP2B-201ENST00000263780 HSP90AA1P07900 732 aaKnown RBP15.72■□□□□ 0.11
CHMP2B-201ENST00000263780 CDC42BPBQ9Y5S2 1711 aa15.72■□□□□ 0.11
CHMP2B-201ENST00000263780 RRP9O43818 475 aaKnown RBP15.71■□□□□ 0.11
CHMP2B-201ENST00000263780 RARSP54136 660 aaKnown RBP15.71■□□□□ 0.11
CHMP2B-201ENST00000263780 SYCP2Q9BX26 1530 aa15.71■□□□□ 0.11
CHMP2B-201ENST00000263780 TRAK2O60296 914 aa15.71■□□□□ 0.1
CHMP2B-201ENST00000263780 FBLN2P98095 1184 aa15.71■□□□□ 0.1
CHMP2B-201ENST00000263780 WDR63Q8IWG1 891 aa15.71■□□□□ 0.1
CHMP2B-201ENST00000263780 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
CHMP2B-201ENST00000263780 ARHGAP5Q13017 1502 aa15.69■□□□□ 0.1
CHMP2B-201ENST00000263780 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
CHMP2B-201ENST00000263780 MYH16Q9H6N6 1097 aa15.68■□□□□ 0.1
CHMP2B-201ENST00000263780 PCDHB15Q9Y5E8 787 aa15.68■□□□□ 0.1
CHMP2B-201ENST00000263780 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
CHMP2B-201ENST00000263780 KDM5AP29375 1690 aaKnown RBP15.68■□□□□ 0.1
CHMP2B-201ENST00000263780 TTC37Q6PGP7 1564 aa15.68■□□□□ 0.1
CHMP2B-201ENST00000263780 PTMSP20962 102 aa15.68■□□□□ 0.1
CHMP2B-201ENST00000263780 RUNDC1Q96C34 613 aa15.68■□□□□ 0.1
CHMP2B-201ENST00000263780 C22orf23Q9BZE7 217 aa15.68■□□□□ 0.1
CHMP2B-201ENST00000263780 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
CHMP2B-201ENST00000263780 HSP90AA2PQ14568 343 aaPredicted RBP15.67■□□□□ 0.1
CHMP2B-201ENST00000263780 HSCBQ8IWL3 235 aa15.66■□□□□ 0.1
CHMP2B-201ENST00000263780 MYOM1P52179 1685 aa15.66■□□□□ 0.1
CHMP2B-201ENST00000263780 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
CHMP2B-201ENST00000263780 GZF1Q9H116 711 aaPredicted RBP15.65■□□□□ 0.1
CHMP2B-201ENST00000263780 GRPEL1Q9HAV7 217 aa15.65■□□□□ 0.1
CHMP2B-201ENST00000263780 KANK1Q14678 1352 aa15.64■□□□□ 0.09
CHMP2B-201ENST00000263780 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms