RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 BACH2Q9BYV9 841 aa23.88■■□□□ 1.41
FAM20B-201ENST00000263733 RUNDC1Q96C34 613 aa23.88■■□□□ 1.41
FAM20B-201ENST00000263733 ANO2Q9NQ90 1003 aa23.88■■□□□ 1.41
FAM20B-201ENST00000263733 BCL11BQ9C0K0 894 aaPredicted RBP23.87■■□□□ 1.41
FAM20B-201ENST00000263733 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
FAM20B-201ENST00000263733 NASPP49321 788 aaPredicted RBP23.87■■□□□ 1.41
FAM20B-201ENST00000263733 NGDNQ8NEJ9 315 aaKnown RBP23.87■■□□□ 1.41
FAM20B-201ENST00000263733 NECTIN2Q92692 538 aa23.87■■□□□ 1.41
FAM20B-201ENST00000263733 RNF214Q8ND24 703 aa23.86■■□□□ 1.41
FAM20B-201ENST00000263733 TAF7LQ5H9L4 462 aa23.86■■□□□ 1.41
FAM20B-201ENST00000263733 BRD4O60885 1362 aaPredicted RBP23.86■■□□□ 1.41
FAM20B-201ENST00000263733 HDAC5Q9UQL6 1122 aa23.86■■□□□ 1.41
FAM20B-201ENST00000263733 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
FAM20B-201ENST00000263733 PDS5BQ9NTI5 1447 aa23.85■■□□□ 1.41
FAM20B-201ENST00000263733 CHMP4AQ9BY43 222 aa23.85■■□□□ 1.41
FAM20B-201ENST00000263733 DIAPH3Q9NSV4 1193 aa23.85■■□□□ 1.41
FAM20B-201ENST00000263733 MINK1Q8N4C8 1332 aaPredicted RBP23.85■■□□□ 1.41
FAM20B-201ENST00000263733 NUCB2P80303 420 aa23.84■■□□□ 1.41
FAM20B-201ENST00000263733 TOMM22Q9NS69 142 aa23.84■■□□□ 1.41
FAM20B-201ENST00000263733 RASSF8Q8NHQ8 419 aa23.84■■□□□ 1.41
FAM20B-201ENST00000263733 KIF3AQ9Y496 699 aa23.83■■□□□ 1.41
FAM20B-201ENST00000263733 EVC2Q86UK5 1308 aa23.83■■□□□ 1.41
FAM20B-201ENST00000263733 DIAPH1O60610 1272 aaKnown RBP23.83■■□□□ 1.41
FAM20B-201ENST00000263733 CCDC34Q96HJ3 373 aa23.83■■□□□ 1.41
FAM20B-201ENST00000263733 LRRC9Q6ZRR7 1453 aa23.83■■□□□ 1.41
FAM20B-201ENST00000263733 VPS37CA5D8V6 355 aaPredicted RBP23.81■■□□□ 1.4
FAM20B-201ENST00000263733 IGF1RP08069 1367 aa23.8■■□□□ 1.4
FAM20B-201ENST00000263733 TPM3P06753 285 aa23.8■■□□□ 1.4
FAM20B-201ENST00000263733 PDZRN3Q9UPQ7 1066 aa23.8■■□□□ 1.4
FAM20B-201ENST00000263733 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
FAM20B-201ENST00000263733 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
FAM20B-201ENST00000263733 INTS3Q68E01 1043 aaKnown RBP23.8■■□□□ 1.4
FAM20B-201ENST00000263733 NGEFQ8N5V2 710 aa23.8■■□□□ 1.4
FAM20B-201ENST00000263733 PES1O00541 588 aaKnown RBP23.79■■□□□ 1.4
FAM20B-201ENST00000263733 API5Q9BZZ5 524 aaKnown RBP23.79■■□□□ 1.4
FAM20B-201ENST00000263733 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
FAM20B-201ENST00000263733 BCAR3O75815 825 aa23.79■■□□□ 1.4
FAM20B-201ENST00000263733 COG3Q96JB2 828 aa23.79■■□□□ 1.4
FAM20B-201ENST00000263733 CAVIN1Q6NZI2 390 aaKnown RBP23.79■■□□□ 1.4
FAM20B-201ENST00000263733 BICD2Q8TD16 824 aa23.78■■□□□ 1.4
FAM20B-201ENST00000263733 FBXW7Q969H0 707 aa23.78■■□□□ 1.4
FAM20B-201ENST00000263733 EIF2S2P20042 333 aaKnown RBP23.78■■□□□ 1.4
FAM20B-201ENST00000263733 PDE4CQ08493 712 aa23.78■■□□□ 1.4
FAM20B-201ENST00000263733 NBPF8Q3BBV2 869 aa23.77■■□□□ 1.4
FAM20B-201ENST00000263733 HMOX1P09601 288 aa23.76■■□□□ 1.39
FAM20B-201ENST00000263733 RBM10P98175 930 aaKnown RBP23.75■■□□□ 1.39
FAM20B-201ENST00000263733 PNISRQ8TF01 805 aaKnown RBP23.75■■□□□ 1.39
FAM20B-201ENST00000263733 ZKSCAN1P17029 563 aaPredicted RBP23.75■■□□□ 1.39
FAM20B-201ENST00000263733 SMC3Q9UQE7 1217 aa23.74■■□□□ 1.39
FAM20B-201ENST00000263733 IFT57Q9NWB7 429 aa23.74■■□□□ 1.39
FAM20B-201ENST00000263733 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
FAM20B-201ENST00000263733 RRBP1Q9P2E9 1410 aaKnown RBP23.73■■□□□ 1.39
FAM20B-201ENST00000263733 A0A0U1RQG5 324 aaPredicted RBP23.72■■□□□ 1.39
FAM20B-201ENST00000263733 CDC45O75419 566 aa23.72■■□□□ 1.39
FAM20B-201ENST00000263733 PPP2R1AP30153 589 aa23.72■■□□□ 1.39
FAM20B-201ENST00000263733 HOMER1Q86YM7 354 aa23.72■■□□□ 1.39
FAM20B-201ENST00000263733 TPD52L1Q16890 204 aaPredicted RBP23.72■■□□□ 1.39
FAM20B-201ENST00000263733 RUFY2Q8WXA3 655 aa23.72■■□□□ 1.39
FAM20B-201ENST00000263733 GGNBP2Q9H3C7 697 aa23.72■■□□□ 1.39
FAM20B-201ENST00000263733 FOSBP53539 338 aa23.71■■□□□ 1.39
FAM20B-201ENST00000263733 FKBP5Q13451 457 aaPredicted RBP23.71■■□□□ 1.39
FAM20B-201ENST00000263733 SKAP1Q86WV1 359 aa23.71■■□□□ 1.39
FAM20B-201ENST00000263733 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
FAM20B-201ENST00000263733 VGFO15240 615 aaPredicted RBP23.7■■□□□ 1.38
FAM20B-201ENST00000263733 NCBP3Q53F19 620 aaKnown RBP23.7■■□□□ 1.38
FAM20B-201ENST00000263733 PRPF40AO75400 957 aaKnown RBP23.7■■□□□ 1.38
FAM20B-201ENST00000263733 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.69■■□□□ 1.38
FAM20B-201ENST00000263733 C9orf78Q9NZ63 289 aaPredicted RBP23.69■■□□□ 1.38
FAM20B-201ENST00000263733 WDR97A6NE52 1622 aa23.69■■□□□ 1.38
FAM20B-201ENST00000263733 MTHFSP49914 203 aa23.69■■□□□ 1.38
FAM20B-201ENST00000263733 CCDC39Q9UFE4 941 aa23.69■■□□□ 1.38
FAM20B-201ENST00000263733 C1orf115Q9H7X2 142 aa23.68■■□□□ 1.38
FAM20B-201ENST00000263733 IFIT2P09913 472 aaKnown RBP23.68■■□□□ 1.38
FAM20B-201ENST00000263733 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
FAM20B-201ENST00000263733 SMG6Q86US8 1419 aaKnown RBP23.68■■□□□ 1.38
FAM20B-201ENST00000263733 SASS6Q6UVJ0 657 aa23.67■■□□□ 1.38
FAM20B-201ENST00000263733 AAMPQ13685 434 aa23.67■■□□□ 1.38
FAM20B-201ENST00000263733 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
FAM20B-201ENST00000263733 MPNDQ8N594 471 aa23.66■■□□□ 1.38
FAM20B-201ENST00000263733 NCOA2Q15596 1464 aa23.65■■□□□ 1.38
FAM20B-201ENST00000263733 EXOSC9Q06265 439 aaKnown RBP23.65■■□□□ 1.38
FAM20B-201ENST00000263733 GNAI1P63096 354 aa23.65■■□□□ 1.38
FAM20B-201ENST00000263733 CCDC27Q2M243 656 aa23.65■■□□□ 1.38
FAM20B-201ENST00000263733 TEFQ10587 303 aa23.64■■□□□ 1.37
FAM20B-201ENST00000263733 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
FAM20B-201ENST00000263733 TPM2P07951 284 aa23.62■■□□□ 1.37
FAM20B-201ENST00000263733 NEK4P51957 841 aa23.62■■□□□ 1.37
FAM20B-201ENST00000263733 ROCK1Q13464 1354 aa23.62■■□□□ 1.37
FAM20B-201ENST00000263733 ANKRD50Q9ULJ7 1429 aa23.62■■□□□ 1.37
FAM20B-201ENST00000263733 PDE3AQ14432 1141 aa23.62■■□□□ 1.37
FAM20B-201ENST00000263733 CABP2Q9NPB3 220 aa23.62■■□□□ 1.37
FAM20B-201ENST00000263733 GPS2Q13227 327 aa23.62■■□□□ 1.37
FAM20B-201ENST00000263733 TSR1Q2NL82 804 aaKnown RBP23.62■■□□□ 1.37
FAM20B-201ENST00000263733 GRPEL1Q9HAV7 217 aa23.62■■□□□ 1.37
FAM20B-201ENST00000263733 CUX1P39880 1505 aa23.61■■□□□ 1.37
FAM20B-201ENST00000263733 TMEM132EQ6IEE7 984 aa23.61■■□□□ 1.37
FAM20B-201ENST00000263733 PKNOX2Q96KN3 472 aa23.61■■□□□ 1.37
FAM20B-201ENST00000263733 CCDC173Q0VFZ6 552 aa23.6■■□□□ 1.37
FAM20B-201ENST00000263733 TSPYL4Q9UJ04 414 aa23.59■■□□□ 1.37
FAM20B-201ENST00000263733 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms