RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 DIAPH3Q9NSV4 1193 aa12.58□□□□□ -0.39
PHF3-201ENST00000262043 APAF1O14727 1248 aa12.58□□□□□ -0.4
PHF3-201ENST00000262043 CEP89Q96ST8 783 aa12.57□□□□□ -0.4
PHF3-201ENST00000262043 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
PHF3-201ENST00000262043 TSR1Q2NL82 804 aaKnown RBP12.57□□□□□ -0.4
PHF3-201ENST00000262043 NEXNQ0ZGT2 675 aa12.57□□□□□ -0.4
PHF3-201ENST00000262043 USP35Q9P2H5 1018 aa12.56□□□□□ -0.4
PHF3-201ENST00000262043 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
PHF3-201ENST00000262043 ATAD2BQ9ULI0 1458 aa12.56□□□□□ -0.4
PHF3-201ENST00000262043 RIPK4P57078 832 aa12.56□□□□□ -0.4
PHF3-201ENST00000262043 SKOR2Q2VWA4 1001 aaPredicted RBP12.55□□□□□ -0.4
PHF3-201ENST00000262043 BECN2A8MW95 431 aa12.55□□□□□ -0.4
PHF3-201ENST00000262043 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
PHF3-201ENST00000262043 CCAR2Q8N163 923 aaKnown RBP12.55□□□□□ -0.4
PHF3-201ENST00000262043 GSE1Q14687 1217 aa12.55□□□□□ -0.4
PHF3-201ENST00000262043 SYNE3Q6ZMZ3 975 aa12.55□□□□□ -0.4
PHF3-201ENST00000262043 ANO2Q9NQ90 1003 aa12.55□□□□□ -0.4
PHF3-201ENST00000262043 DIAPH1O60610 1272 aaKnown RBP12.54□□□□□ -0.4
PHF3-201ENST00000262043 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
PHF3-201ENST00000262043 APPP05067 770 aa12.54□□□□□ -0.4
PHF3-201ENST00000262043 RUFY2Q8WXA3 655 aa12.54□□□□□ -0.4
PHF3-201ENST00000262043 RAD21O60216 631 aa12.54□□□□□ -0.4
PHF3-201ENST00000262043 REC8O95072 547 aa12.54□□□□□ -0.4
PHF3-201ENST00000262043 PSME1Q06323 249 aa12.54□□□□□ -0.4
PHF3-201ENST00000262043 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
PHF3-201ENST00000262043 PTPRGP23470 1445 aa12.53□□□□□ -0.4
PHF3-201ENST00000262043 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
PHF3-201ENST00000262043 TPM2P07951 284 aa12.53□□□□□ -0.4
PHF3-201ENST00000262043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.53□□□□□ -0.4
PHF3-201ENST00000262043 IFIT2P09913 472 aaKnown RBP12.53□□□□□ -0.4
PHF3-201ENST00000262043 SYTL4Q96C24 671 aaPredicted RBP12.53□□□□□ -0.4
PHF3-201ENST00000262043 TRIM29Q14134 588 aa12.52□□□□□ -0.4
PHF3-201ENST00000262043 CHMP4CQ96CF2 233 aa12.52□□□□□ -0.4
PHF3-201ENST00000262043 DZIP1LQ8IYY4 767 aaKnown RBP12.52□□□□□ -0.41
PHF3-201ENST00000262043 TPM1P09493 284 aa12.52□□□□□ -0.41
PHF3-201ENST00000262043 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.41
PHF3-201ENST00000262043 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
PHF3-201ENST00000262043 HSP90AA2PQ14568 343 aaPredicted RBP12.51□□□□□ -0.41
PHF3-201ENST00000262043 VPS37DQ86XT2 251 aa12.51□□□□□ -0.41
PHF3-201ENST00000262043 AMOTL1Q8IY63 956 aa12.51□□□□□ -0.41
PHF3-201ENST00000262043 NOL10Q9BSC4 688 aaKnown RBP12.51□□□□□ -0.41
PHF3-201ENST00000262043 MSH5O43196 834 aa12.51□□□□□ -0.41
PHF3-201ENST00000262043 ZNF592Q92610 1267 aa12.51□□□□□ -0.41
PHF3-201ENST00000262043 HMOX1P09601 288 aa12.51□□□□□ -0.41
PHF3-201ENST00000262043 RUNDC1Q96C34 613 aa12.51□□□□□ -0.41
PHF3-201ENST00000262043 TRIM34Q9BYJ4 488 aa12.51□□□□□ -0.41
PHF3-201ENST00000262043 FKBP5Q13451 457 aaPredicted RBP12.5□□□□□ -0.41
PHF3-201ENST00000262043 TCEAL9Q9UHQ7 104 aa12.5□□□□□ -0.41
PHF3-201ENST00000262043 MYOM3Q5VTT5 1437 aa12.5□□□□□ -0.41
PHF3-201ENST00000262043 DDX58O95786 925 aaKnown RBP12.49□□□□□ -0.41
PHF3-201ENST00000262043 ARHGAP5Q13017 1502 aa12.49□□□□□ -0.41
PHF3-201ENST00000262043 PCMTD1Q96MG8 357 aaPredicted RBP12.49□□□□□ -0.41
PHF3-201ENST00000262043 CPLX2Q6PUV4 134 aaKnown RBP12.49□□□□□ -0.41
PHF3-201ENST00000262043 FOSBP53539 338 aa12.48□□□□□ -0.41
PHF3-201ENST00000262043 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
PHF3-201ENST00000262043 TSPYL4Q9UJ04 414 aa12.48□□□□□ -0.41
PHF3-201ENST00000262043 CPLX1O14810 134 aa12.48□□□□□ -0.41
PHF3-201ENST00000262043 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.41
PHF3-201ENST00000262043 FBXW7Q969H0 707 aa12.48□□□□□ -0.41
PHF3-201ENST00000262043 TRDNQ13061 729 aa12.47□□□□□ -0.41
PHF3-201ENST00000262043 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
PHF3-201ENST00000262043 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
PHF3-201ENST00000262043 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
PHF3-201ENST00000262043 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
PHF3-201ENST00000262043 BICD2Q8TD16 824 aa12.47□□□□□ -0.41
PHF3-201ENST00000262043 FGD6Q6ZV73 1430 aa12.47□□□□□ -0.41
PHF3-201ENST00000262043 LNPKQ9C0E8 428 aa12.47□□□□□ -0.41
PHF3-201ENST00000262043 API5Q9BZZ5 524 aaKnown RBP12.47□□□□□ -0.41
PHF3-201ENST00000262043 CCDC70Q6NSX1 233 aa12.46□□□□□ -0.41
PHF3-201ENST00000262043 RSPH6AQ9H0K4 717 aa12.46□□□□□ -0.41
PHF3-201ENST00000262043 RAD54L2Q9Y4B4 1467 aa12.46□□□□□ -0.41
PHF3-201ENST00000262043 HOOK1Q9UJC3 728 aaKnown RBP12.46□□□□□ -0.42
PHF3-201ENST00000262043 CCDC7Q96M83 1385 aa12.46□□□□□ -0.42
PHF3-201ENST00000262043 MIA2Q96PC5 1412 aa12.46□□□□□ -0.42
PHF3-201ENST00000262043 SUPT6HQ7KZ85 1726 aaKnown RBP12.46□□□□□ -0.42
PHF3-201ENST00000262043 LRRC9Q6ZRR7 1453 aa12.45□□□□□ -0.42
PHF3-201ENST00000262043 KIF21BO75037 1637 aa12.45□□□□□ -0.42
PHF3-201ENST00000262043 ERICH2A1L162 156 aa12.45□□□□□ -0.42
PHF3-201ENST00000262043 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.45□□□□□ -0.42
PHF3-201ENST00000262043 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
PHF3-201ENST00000262043 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
PHF3-201ENST00000262043 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
PHF3-201ENST00000262043 ZNF644Q9H582 1327 aaPredicted RBP12.45□□□□□ -0.42
PHF3-201ENST00000262043 PANK1Q8TE04 598 aa12.45□□□□□ -0.42
PHF3-201ENST00000262043 SMC3Q9UQE7 1217 aa12.44□□□□□ -0.42
PHF3-201ENST00000262043 CTDP1Q9Y5B0 961 aaPredicted RBP12.44□□□□□ -0.42
PHF3-201ENST00000262043 KIF7Q2M1P5 1343 aa12.44□□□□□ -0.42
PHF3-201ENST00000262043 AIMP1Q12904 312 aaKnown RBP12.44□□□□□ -0.42
PHF3-201ENST00000262043 CHMP5Q9NZZ3 219 aa12.44□□□□□ -0.42
PHF3-201ENST00000262043 RIC3Q7Z5B4 369 aa12.43□□□□□ -0.42
PHF3-201ENST00000262043 CABP2Q9NPB3 220 aa12.43□□□□□ -0.42
PHF3-201ENST00000262043 ANKRD20A12PQ8NF67 263 aa12.43□□□□□ -0.42
PHF3-201ENST00000262043 NUTM2GQ5VZR2 741 aa12.43□□□□□ -0.42
PHF3-201ENST00000262043 SASS6Q6UVJ0 657 aa12.43□□□□□ -0.42
PHF3-201ENST00000262043 HOMER1Q86YM7 354 aa12.43□□□□□ -0.42
PHF3-201ENST00000262043 GNAI1P63096 354 aa12.43□□□□□ -0.42
PHF3-201ENST00000262043 C22orf23Q9BZE7 217 aa12.43□□□□□ -0.42
PHF3-201ENST00000262043 FANCIQ9NVI1 1328 aa12.43□□□□□ -0.42
PHF3-201ENST00000262043 GPS2Q13227 327 aa12.42□□□□□ -0.42
PHF3-201ENST00000262043 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms