RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 FYCO1Q9BQS8 1478 aa16.84■□□□□ 0.29
PDGFRB-201ENST00000261799 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
PDGFRB-201ENST00000261799 RRBP1Q9P2E9 1410 aaKnown RBP16.83■□□□□ 0.29
PDGFRB-201ENST00000261799 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
PDGFRB-201ENST00000261799 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
PDGFRB-201ENST00000261799 ANO8Q9HCE9 1232 aaPredicted RBP16.82■□□□□ 0.28
PDGFRB-201ENST00000261799 RRP7AQ9Y3A4 280 aaKnown RBP16.82■□□□□ 0.28
PDGFRB-201ENST00000261799 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
PDGFRB-201ENST00000261799 MYBBP1AQ9BQG0 1328 aaKnown RBP16.81■□□□□ 0.28
PDGFRB-201ENST00000261799 PDE3BQ13370 1112 aa16.81■□□□□ 0.28
PDGFRB-201ENST00000261799 DHX16O60231 1041 aaKnown RBP16.8■□□□□ 0.28
PDGFRB-201ENST00000261799 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
PDGFRB-201ENST00000261799 PTMSP20962 102 aa16.8■□□□□ 0.28
PDGFRB-201ENST00000261799 CSPP1Q1MSJ5 1256 aa16.8■□□□□ 0.28
PDGFRB-201ENST00000261799 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
PDGFRB-201ENST00000261799 AFAP1Q8N556 730 aa16.8■□□□□ 0.28
PDGFRB-201ENST00000261799 PLEKHO1Q53GL0 409 aaPredicted RBP16.79■□□□□ 0.28
PDGFRB-201ENST00000261799 TOM1L2Q6ZVM7 507 aa16.79■□□□□ 0.28
PDGFRB-201ENST00000261799 RIC3Q7Z5B4 369 aa16.79■□□□□ 0.28
PDGFRB-201ENST00000261799 CCAR1Q8IX12 1150 aaKnown RBP16.78■□□□□ 0.28
PDGFRB-201ENST00000261799 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
PDGFRB-201ENST00000261799 ELL2O00472 640 aaPredicted RBP16.78■□□□□ 0.28
PDGFRB-201ENST00000261799 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
PDGFRB-201ENST00000261799 GLIPR1L2Q4G1C9 344 aa16.77■□□□□ 0.28
PDGFRB-201ENST00000261799 NECTIN2Q92692 538 aa16.77■□□□□ 0.28
PDGFRB-201ENST00000261799 ROCK1Q13464 1354 aa16.77■□□□□ 0.27
PDGFRB-201ENST00000261799 WWC1Q8IX03 1113 aa16.77■□□□□ 0.27
PDGFRB-201ENST00000261799 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.27
PDGFRB-201ENST00000261799 APPP05067 770 aa16.76■□□□□ 0.27
PDGFRB-201ENST00000261799 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
PDGFRB-201ENST00000261799 CEP89Q96ST8 783 aa16.76■□□□□ 0.27
PDGFRB-201ENST00000261799 SPRYD3Q8NCJ5 442 aa16.76■□□□□ 0.27
PDGFRB-201ENST00000261799 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
PDGFRB-201ENST00000261799 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
PDGFRB-201ENST00000261799 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
PDGFRB-201ENST00000261799 NOC3LQ8WTT2 800 aaKnown RBP16.75■□□□□ 0.27
PDGFRB-201ENST00000261799 ANKRD50Q9ULJ7 1429 aa16.75■□□□□ 0.27
PDGFRB-201ENST00000261799 USP47Q96K76 1375 aa16.74■□□□□ 0.27
PDGFRB-201ENST00000261799 CFTRP13569 1480 aa16.74■□□□□ 0.27
PDGFRB-201ENST00000261799 RILPL2Q969X0 211 aa16.74■□□□□ 0.27
PDGFRB-201ENST00000261799 CCDC43Q96MW1 224 aaKnown RBP16.73■□□□□ 0.27
PDGFRB-201ENST00000261799 SCAPERQ9BY12 1400 aa16.73■□□□□ 0.27
PDGFRB-201ENST00000261799 ERICH2A1L162 156 aa16.73■□□□□ 0.27
PDGFRB-201ENST00000261799 RIPK4P57078 832 aa16.73■□□□□ 0.27
PDGFRB-201ENST00000261799 SPG7Q9UQ90 795 aa16.73■□□□□ 0.27
PDGFRB-201ENST00000261799 DIAPH3Q9NSV4 1193 aa16.73■□□□□ 0.27
PDGFRB-201ENST00000261799 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
PDGFRB-201ENST00000261799 SYAP1Q96A49 352 aaPredicted RBP16.73■□□□□ 0.27
PDGFRB-201ENST00000261799 SAMD1Q6SPF0 538 aaPredicted RBP16.72■□□□□ 0.27
PDGFRB-201ENST00000261799 RUFY2Q8WXA3 655 aa16.72■□□□□ 0.27
PDGFRB-201ENST00000261799 FKBP5Q13451 457 aaPredicted RBP16.72■□□□□ 0.27
PDGFRB-201ENST00000261799 GBP4Q96PP9 640 aa16.72■□□□□ 0.27
PDGFRB-201ENST00000261799 E9PSI1 815 aa16.72■□□□□ 0.27
PDGFRB-201ENST00000261799 CASKIN1Q8WXD9 1431 aa16.72■□□□□ 0.27
PDGFRB-201ENST00000261799 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
PDGFRB-201ENST00000261799 GAS2L2Q8NHY3 880 aa16.71■□□□□ 0.27
PDGFRB-201ENST00000261799 SLC52A1Q9NWF4 448 aa16.71■□□□□ 0.27
PDGFRB-201ENST00000261799 AIMP1Q12904 312 aaKnown RBP16.71■□□□□ 0.27
PDGFRB-201ENST00000261799 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
PDGFRB-201ENST00000261799 ZNF644Q9H582 1327 aaPredicted RBP16.71■□□□□ 0.27
PDGFRB-201ENST00000261799 H3BQV1 296 aa16.71■□□□□ 0.26
PDGFRB-201ENST00000261799 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.26
PDGFRB-201ENST00000261799 IFFO2Q5TF58 517 aa16.71■□□□□ 0.26
PDGFRB-201ENST00000261799 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.26
PDGFRB-201ENST00000261799 API5Q9BZZ5 524 aaKnown RBP16.71■□□□□ 0.26
PDGFRB-201ENST00000261799 CABP4P57796 275 aa16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 TRIM29Q14134 588 aa16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 SF3A1Q15459 793 aaKnown RBP16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 TRDNQ13061 729 aa16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 RAPGEF3O95398 923 aa16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 GNAI1P63096 354 aa16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 PRDM11Q9NQV5 511 aa16.7■□□□□ 0.26
PDGFRB-201ENST00000261799 HECW1Q76N89 1606 aa16.69■□□□□ 0.26
PDGFRB-201ENST00000261799 RUSC2Q8N2Y8 1516 aa16.69■□□□□ 0.26
PDGFRB-201ENST00000261799 HSP90AB4PQ58FF6 505 aa16.69■□□□□ 0.26
PDGFRB-201ENST00000261799 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
PDGFRB-201ENST00000261799 TCERG1O14776 1098 aaKnown RBP16.69■□□□□ 0.26
PDGFRB-201ENST00000261799 TPM2P07951 284 aa16.69■□□□□ 0.26
PDGFRB-201ENST00000261799 KIF21BO75037 1637 aa16.68■□□□□ 0.26
PDGFRB-201ENST00000261799 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
PDGFRB-201ENST00000261799 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
PDGFRB-201ENST00000261799 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
PDGFRB-201ENST00000261799 ST18O60284 1047 aa16.68■□□□□ 0.26
PDGFRB-201ENST00000261799 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
PDGFRB-201ENST00000261799 PRAM1Q96QH2 718 aa16.67■□□□□ 0.26
PDGFRB-201ENST00000261799 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
PDGFRB-201ENST00000261799 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
PDGFRB-201ENST00000261799 HMOX1P09601 288 aa16.66■□□□□ 0.26
PDGFRB-201ENST00000261799 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
PDGFRB-201ENST00000261799 LAMC3Q9Y6N6 1575 aa16.66■□□□□ 0.26
PDGFRB-201ENST00000261799 FYB1O15117 783 aa16.66■□□□□ 0.26
PDGFRB-201ENST00000261799 CD109Q6YHK3 1445 aa16.66■□□□□ 0.26
PDGFRB-201ENST00000261799 CCDC47Q96A33 483 aaKnown RBP16.66■□□□□ 0.26
PDGFRB-201ENST00000261799 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
PDGFRB-201ENST00000261799 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
PDGFRB-201ENST00000261799 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
PDGFRB-201ENST00000261799 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms