RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 COL17A1Q9UMD9 1497 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-201ENST00000261366 IGHDP01880 384 aa20.61■□□□□ 0.89
LMNB1-201ENST00000261366 POGKQ9P215 609 aa20.61■□□□□ 0.89
LMNB1-201ENST00000261366 CANXP27824 592 aaKnown RBP20.59■□□□□ 0.89
LMNB1-201ENST00000261366 A2MP01023 1474 aa20.58■□□□□ 0.89
LMNB1-201ENST00000261366 EFCAB2Q5VUJ9 269 aa20.58■□□□□ 0.89
LMNB1-201ENST00000261366 FAM135AQ9P2D6 1515 aa20.58■□□□□ 0.89
LMNB1-201ENST00000261366 SPRYD3Q8NCJ5 442 aa20.58■□□□□ 0.88
LMNB1-201ENST00000261366 DMRT2Q9Y5R5 561 aa20.58■□□□□ 0.88
LMNB1-201ENST00000261366 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
LMNB1-201ENST00000261366 NEUROD2Q15784 382 aa20.57■□□□□ 0.88
LMNB1-201ENST00000261366 SLFN5Q08AF3 891 aa20.57■□□□□ 0.88
LMNB1-201ENST00000261366 COG6Q9Y2V7 657 aa20.56■□□□□ 0.88
LMNB1-201ENST00000261366 TRPM1Q7Z4N2 1603 aa20.56■□□□□ 0.88
LMNB1-201ENST00000261366 PANK1Q8TE04 598 aa20.56■□□□□ 0.88
LMNB1-201ENST00000261366 MAGI2Q86UL8 1455 aa20.54■□□□□ 0.88
LMNB1-201ENST00000261366 PLCH2O75038 1416 aa20.53■□□□□ 0.88
LMNB1-201ENST00000261366 PLA2R1Q13018 1463 aa20.53■□□□□ 0.88
LMNB1-201ENST00000261366 AMER1Q5JTC6 1135 aaPredicted RBP20.53■□□□□ 0.88
LMNB1-201ENST00000261366 AFAP1Q8N556 730 aa20.53■□□□□ 0.88
LMNB1-201ENST00000261366 PLEKHH2Q8IVE3 1493 aa20.52■□□□□ 0.88
LMNB1-201ENST00000261366 ZNF521Q96K83 1311 aa20.52■□□□□ 0.88
LMNB1-201ENST00000261366 ZCCHC11Q5TAX3 1644 aaKnown RBP20.51■□□□□ 0.87
LMNB1-201ENST00000261366 GPRASP1Q5JY77 1395 aa20.5■□□□□ 0.87
LMNB1-201ENST00000261366 TNNT2P45379 298 aaPredicted RBP20.5■□□□□ 0.87
LMNB1-201ENST00000261366 BCL2L13Q9BXK5 485 aa20.49■□□□□ 0.87
LMNB1-201ENST00000261366 USP19O94966 1318 aa20.49■□□□□ 0.87
LMNB1-201ENST00000261366 RRP7AQ9Y3A4 280 aaKnown RBP20.49■□□□□ 0.87
LMNB1-201ENST00000261366 UHRF1BP1LA0JNW5 1464 aa20.48■□□□□ 0.87
LMNB1-201ENST00000261366 MYO5CQ9NQX4 1742 aa20.48■□□□□ 0.87
LMNB1-201ENST00000261366 TRAPPC8Q9Y2L5 1435 aa20.48■□□□□ 0.87
LMNB1-201ENST00000261366 GZF1Q9H116 711 aaPredicted RBP20.48■□□□□ 0.87
LMNB1-201ENST00000261366 CLUAP1Q96AJ1 413 aa20.46■□□□□ 0.87
LMNB1-201ENST00000261366 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
LMNB1-201ENST00000261366 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
LMNB1-201ENST00000261366 SPAG9O60271 1321 aaKnown RBP20.44■□□□□ 0.86
LMNB1-201ENST00000261366 WDR7Q9Y4E6 1490 aa20.44■□□□□ 0.86
LMNB1-201ENST00000261366 BECN1Q14457 450 aa20.44■□□□□ 0.86
LMNB1-201ENST00000261366 CENPJQ9HC77 1338 aaPredicted RBP20.42■□□□□ 0.86
LMNB1-201ENST00000261366 FAM43AQ8N2R8 423 aa20.42■□□□□ 0.86
LMNB1-201ENST00000261366 INSRP06213 1382 aa20.42■□□□□ 0.86
LMNB1-201ENST00000261366 NKTRP30414 1462 aaKnown RBP20.42■□□□□ 0.86
LMNB1-201ENST00000261366 E9PSI1 815 aa20.41■□□□□ 0.86
LMNB1-201ENST00000261366 MAST1Q9Y2H9 1570 aa20.41■□□□□ 0.86
LMNB1-201ENST00000261366 RRAGDQ9NQL2 400 aaPredicted RBP20.4■□□□□ 0.86
LMNB1-201ENST00000261366 EIF3AQ14152 1382 aaKnown RBP20.4■□□□□ 0.86
LMNB1-201ENST00000261366 TRMT2AQ8IZ69 625 aaKnown RBP20.39■□□□□ 0.85
LMNB1-201ENST00000261366 DUOX2Q9NRD8 1548 aa20.38■□□□□ 0.85
LMNB1-201ENST00000261366 UBE2Q2Q8WVN8 375 aa20.37■□□□□ 0.85
LMNB1-201ENST00000261366 CGNL1Q0VF96 1302 aa20.37■□□□□ 0.85
LMNB1-201ENST00000261366 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
LMNB1-201ENST00000261366 UPF2Q9HAU5 1272 aaKnown RBP20.36■□□□□ 0.85
LMNB1-201ENST00000261366 ABCC1P33527 1531 aa20.36■□□□□ 0.85
LMNB1-201ENST00000261366 PCDHB15Q9Y5E8 787 aa20.36■□□□□ 0.85
LMNB1-201ENST00000261366 RLBP1P12271 317 aa20.36■□□□□ 0.85
LMNB1-201ENST00000261366 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
LMNB1-201ENST00000261366 PLXNC1O60486 1568 aa20.35■□□□□ 0.85
LMNB1-201ENST00000261366 CDCA8Q53HL2 280 aa20.35■□□□□ 0.85
LMNB1-201ENST00000261366 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
LMNB1-201ENST00000261366 TBC1D2Q9BYX2 928 aa20.35■□□□□ 0.85
LMNB1-201ENST00000261366 WWC1Q8IX03 1113 aa20.34■□□□□ 0.85
LMNB1-201ENST00000261366 PANK2Q9BZ23 570 aa20.34■□□□□ 0.85
LMNB1-201ENST00000261366 UNC13BO14795 1591 aa20.34■□□□□ 0.85
LMNB1-201ENST00000261366 PDZRN3Q9UPQ7 1066 aa20.33■□□□□ 0.85
LMNB1-201ENST00000261366 PDE3AQ14432 1141 aa20.32■□□□□ 0.84
LMNB1-201ENST00000261366 CARD14Q9BXL6 1004 aa20.32■□□□□ 0.84
LMNB1-201ENST00000261366 FANCAO15360 1455 aa20.32■□□□□ 0.84
LMNB1-201ENST00000261366 ASXL1Q8IXJ9 1541 aa20.31■□□□□ 0.84
LMNB1-201ENST00000261366 NPM1P06748 294 aaKnown RBP eCLIP20.31■□□□□ 0.84
LMNB1-201ENST00000261366 ASXL2Q76L83 1435 aa20.3■□□□□ 0.84
LMNB1-201ENST00000261366 KIF3BO15066 747 aa20.3■□□□□ 0.84
LMNB1-201ENST00000261366 CFAP70Q5T0N1 1121 aa20.3■□□□□ 0.84
LMNB1-201ENST00000261366 SCAPERQ9BY12 1400 aa20.3■□□□□ 0.84
LMNB1-201ENST00000261366 MFAP1P55081 439 aaKnown RBP20.3■□□□□ 0.84
LMNB1-201ENST00000261366 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
LMNB1-201ENST00000261366 NAP1L5Q96NT1 182 aaPredicted RBP20.28■□□□□ 0.84
LMNB1-201ENST00000261366 PIK3C2GO75747 1445 aa20.28■□□□□ 0.84
LMNB1-201ENST00000261366 IQGAP3Q86VI3 1631 aa20.28■□□□□ 0.84
LMNB1-201ENST00000261366 XRCC6P12956 609 aaKnown RBP eCLIP20.28■□□□□ 0.84
LMNB1-201ENST00000261366 RARSP54136 660 aaKnown RBP20.28■□□□□ 0.84
LMNB1-201ENST00000261366 L1TD1Q5T7N2 865 aaKnown RBP20.28■□□□□ 0.84
LMNB1-201ENST00000261366 EIF2AK4Q9P2K8 1649 aaKnown RBP20.28■□□□□ 0.84
LMNB1-201ENST00000261366 TBC1D32Q96NH3 1257 aa20.27■□□□□ 0.84
LMNB1-201ENST00000261366 GOLGA6L3A6NEY3 463 aa20.27■□□□□ 0.83
LMNB1-201ENST00000261366 TCP11L2Q8N4U5 519 aa20.26■□□□□ 0.83
LMNB1-201ENST00000261366 RTEL1-TNFRSF6BF6WH68 1400 aa20.25■□□□□ 0.83
LMNB1-201ENST00000261366 PMFBP1Q8TBY8 1022 aa20.25■□□□□ 0.83
LMNB1-201ENST00000261366 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
LMNB1-201ENST00000261366 ADGRL1O94910 1474 aa20.25■□□□□ 0.83
LMNB1-201ENST00000261366 MORC1Q86VD1 984 aa20.24■□□□□ 0.83
LMNB1-201ENST00000261366 ZFYVE16Q7Z3T8 1539 aa20.23■□□□□ 0.83
LMNB1-201ENST00000261366 SCAF11Q99590 1463 aaKnown RBP20.23■□□□□ 0.83
LMNB1-201ENST00000261366 NLRP1Q9C000 1473 aa20.23■□□□□ 0.83
LMNB1-201ENST00000261366 LAMC1P11047 1609 aa20.23■□□□□ 0.83
LMNB1-201ENST00000261366 MCM4P33991 863 aa20.22■□□□□ 0.83
LMNB1-201ENST00000261366 ARAP3Q8WWN8 1544 aa20.21■□□□□ 0.83
LMNB1-201ENST00000261366 ATP10AO60312 1499 aa20.21■□□□□ 0.83
LMNB1-201ENST00000261366 CHGAP10645 457 aaKnown RBP20.2■□□□□ 0.83
LMNB1-201ENST00000261366 FTSJ3Q8IY81 847 aaKnown RBP20.2■□□□□ 0.82
LMNB1-201ENST00000261366 RWDD1Q9H446 243 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms