RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 AKAP17AQ02040 695 aaKnown RBP14.89□□□□□ -0.03
COL8A1-201ENST00000261037 APAF1O14727 1248 aa14.89□□□□□ -0.03
COL8A1-201ENST00000261037 CEP89Q96ST8 783 aa14.89□□□□□ -0.03
COL8A1-201ENST00000261037 ANO2Q9NQ90 1003 aa14.89□□□□□ -0.03
COL8A1-201ENST00000261037 USP47Q96K76 1375 aa14.89□□□□□ -0.03
COL8A1-201ENST00000261037 KIF3AQ9Y496 699 aa14.88□□□□□ -0.03
COL8A1-201ENST00000261037 C9orf78Q9NZ63 289 aaPredicted RBP14.88□□□□□ -0.03
COL8A1-201ENST00000261037 DDX49Q9Y6V7 483 aaKnown RBP14.88□□□□□ -0.03
COL8A1-201ENST00000261037 CCAR2Q8N163 923 aaKnown RBP14.88□□□□□ -0.03
COL8A1-201ENST00000261037 FOSBP53539 338 aa14.87□□□□□ -0.03
COL8A1-201ENST00000261037 UACAQ9BZF9 1416 aa14.87□□□□□ -0.03
COL8A1-201ENST00000261037 DHX57Q6P158 1386 aaKnown RBP14.87□□□□□ -0.03
COL8A1-201ENST00000261037 TNNT3P45378 269 aaPredicted RBP14.87□□□□□ -0.03
COL8A1-201ENST00000261037 APPP05067 770 aa14.86□□□□□ -0.03
COL8A1-201ENST00000261037 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
COL8A1-201ENST00000261037 RIPK4P57078 832 aa14.85□□□□□ -0.03
COL8A1-201ENST00000261037 SYNE3Q6ZMZ3 975 aa14.85□□□□□ -0.03
COL8A1-201ENST00000261037 GOLGA6L19H0YKK7 550 aa14.85□□□□□ -0.03
COL8A1-201ENST00000261037 NEXNQ0ZGT2 675 aa14.85□□□□□ -0.03
COL8A1-201ENST00000261037 DIAPH1O60610 1272 aaKnown RBP14.84□□□□□ -0.03
COL8A1-201ENST00000261037 PRKRIP1Q9H875 184 aaPredicted RBP14.84□□□□□ -0.03
COL8A1-201ENST00000261037 TRIM34Q9BYJ4 488 aa14.84□□□□□ -0.03
COL8A1-201ENST00000261037 CFTRP13569 1480 aa14.84□□□□□ -0.03
COL8A1-201ENST00000261037 IFIT2P09913 472 aaKnown RBP14.84□□□□□ -0.03
COL8A1-201ENST00000261037 BECN2A8MW95 431 aa14.83□□□□□ -0.04
COL8A1-201ENST00000261037 CYB5RLQ6IPT4 315 aa14.83□□□□□ -0.04
COL8A1-201ENST00000261037 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
COL8A1-201ENST00000261037 NOL10Q9BSC4 688 aaKnown RBP14.83□□□□□ -0.04
COL8A1-201ENST00000261037 ZNF592Q92610 1267 aa14.82□□□□□ -0.04
COL8A1-201ENST00000261037 HMOX1P09601 288 aa14.82□□□□□ -0.04
COL8A1-201ENST00000261037 PSME1Q06323 249 aa14.82□□□□□ -0.04
COL8A1-201ENST00000261037 CC2D2AQ9P2K1 1620 aa14.82□□□□□ -0.04
COL8A1-201ENST00000261037 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
COL8A1-201ENST00000261037 DHX16O60231 1041 aaKnown RBP14.82□□□□□ -0.04
COL8A1-201ENST00000261037 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
COL8A1-201ENST00000261037 MEX3CQ5U5Q3 659 aaKnown RBP14.82□□□□□ -0.04
COL8A1-201ENST00000261037 PCMTD1Q96MG8 357 aaPredicted RBP14.82□□□□□ -0.04
COL8A1-201ENST00000261037 TSR1Q2NL82 804 aaKnown RBP14.81□□□□□ -0.04
COL8A1-201ENST00000261037 NUTM2GQ5VZR2 741 aa14.81□□□□□ -0.04
COL8A1-201ENST00000261037 TCEAL9Q9UHQ7 104 aa14.81□□□□□ -0.04
COL8A1-201ENST00000261037 VPS37DQ86XT2 251 aa14.81□□□□□ -0.04
COL8A1-201ENST00000261037 FKBP5Q13451 457 aaPredicted RBP14.81□□□□□ -0.04
COL8A1-201ENST00000261037 TRIM29Q14134 588 aa14.81□□□□□ -0.04
COL8A1-201ENST00000261037 AMOTL1Q8IY63 956 aa14.81□□□□□ -0.04
COL8A1-201ENST00000261037 TPM2P07951 284 aa14.8□□□□□ -0.04
COL8A1-201ENST00000261037 CTDP1Q9Y5B0 961 aaPredicted RBP14.8□□□□□ -0.04
COL8A1-201ENST00000261037 SAMD1Q6SPF0 538 aaPredicted RBP14.8□□□□□ -0.04
COL8A1-201ENST00000261037 NFXL1Q6ZNB6 911 aa14.79□□□□□ -0.04
COL8A1-201ENST00000261037 DZIP1LQ8IYY4 767 aaKnown RBP14.79□□□□□ -0.04
COL8A1-201ENST00000261037 FBXO3Q9UK99 471 aa14.79□□□□□ -0.04
COL8A1-201ENST00000261037 DDX19BQ9UMR2 479 aa14.79□□□□□ -0.04
COL8A1-201ENST00000261037 ZBED9Q6R2W3 1325 aa14.79□□□□□ -0.04
COL8A1-201ENST00000261037 KDM4AO75164 1064 aa14.79□□□□□ -0.04
COL8A1-201ENST00000261037 RUFY2Q8WXA3 655 aa14.78□□□□□ -0.04
COL8A1-201ENST00000261037 ATP6V1DQ9Y5K8 247 aa14.78□□□□□ -0.04
COL8A1-201ENST00000261037 AIMP1Q12904 312 aaKnown RBP14.78□□□□□ -0.04
COL8A1-201ENST00000261037 TSPYL4Q9UJ04 414 aa14.78□□□□□ -0.04
COL8A1-201ENST00000261037 GRIN2BQ13224 1484 aa14.78□□□□□ -0.04
COL8A1-201ENST00000261037 FYB1O15117 783 aa14.77□□□□□ -0.04
COL8A1-201ENST00000261037 KLHL34Q8N239 644 aa14.77□□□□□ -0.04
COL8A1-201ENST00000261037 CPLX1O14810 134 aa14.77□□□□□ -0.05
COL8A1-201ENST00000261037 ZKSCAN1P17029 563 aaPredicted RBP14.77□□□□□ -0.05
COL8A1-201ENST00000261037 G3BP1Q13283 466 aaKnown RBP eCLIP14.77□□□□□ -0.05
COL8A1-201ENST00000261037 BICD2Q8TD16 824 aa14.76□□□□□ -0.05
COL8A1-201ENST00000261037 TPM1P09493 284 aa14.76□□□□□ -0.05
COL8A1-201ENST00000261037 GSE1Q14687 1217 aa14.76□□□□□ -0.05
COL8A1-201ENST00000261037 PRDM2Q13029 1718 aa14.76□□□□□ -0.05
COL8A1-201ENST00000261037 VPS37CA5D8V6 355 aaPredicted RBP14.76□□□□□ -0.05
COL8A1-201ENST00000261037 SYNJ1O43426 1573 aa14.76□□□□□ -0.05
COL8A1-201ENST00000261037 PATL2C9JE40 543 aaKnown RBP14.75□□□□□ -0.05
COL8A1-201ENST00000261037 SKOR2Q2VWA4 1001 aaPredicted RBP14.75□□□□□ -0.05
COL8A1-201ENST00000261037 REC8O95072 547 aa14.75□□□□□ -0.05
COL8A1-201ENST00000261037 CABP2Q9NPB3 220 aa14.75□□□□□ -0.05
COL8A1-201ENST00000261037 MRC2Q9UBG0 1479 aa14.75□□□□□ -0.05
COL8A1-201ENST00000261037 NESP48681 1621 aa14.75□□□□□ -0.05
COL8A1-201ENST00000261037 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL8A1-201ENST00000261037 DDX58O95786 925 aaKnown RBP14.75□□□□□ -0.05
COL8A1-201ENST00000261037 BCL11BQ9C0K0 894 aaPredicted RBP14.75□□□□□ -0.05
COL8A1-201ENST00000261037 KIF21BO75037 1637 aa14.75□□□□□ -0.05
COL8A1-201ENST00000261037 LRRFIP1Q32MZ4 808 aaKnown RBP14.75□□□□□ -0.05
COL8A1-201ENST00000261037 API5Q9BZZ5 524 aaKnown RBP14.74□□□□□ -0.05
COL8A1-201ENST00000261037 GGNBP2Q9H3C7 697 aa14.74□□□□□ -0.05
COL8A1-201ENST00000261037 CUX1P39880 1505 aa14.74□□□□□ -0.05
COL8A1-201ENST00000261037 RUNDC1Q96C34 613 aa14.74□□□□□ -0.05
COL8A1-201ENST00000261037 LNPKQ9C0E8 428 aa14.74□□□□□ -0.05
COL8A1-201ENST00000261037 CPLX2Q6PUV4 134 aaKnown RBP14.73□□□□□ -0.05
COL8A1-201ENST00000261037 NEUROD6Q96NK8 337 aa14.73□□□□□ -0.05
COL8A1-201ENST00000261037 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
COL8A1-201ENST00000261037 PANK1Q8TE04 598 aa14.73□□□□□ -0.05
COL8A1-201ENST00000261037 MTMR7Q9Y216 660 aa14.73□□□□□ -0.05
COL8A1-201ENST00000261037 TRDNQ13061 729 aa14.73□□□□□ -0.05
COL8A1-201ENST00000261037 ZNF644Q9H582 1327 aaPredicted RBP14.72□□□□□ -0.05
COL8A1-201ENST00000261037 RIC3Q7Z5B4 369 aa14.72□□□□□ -0.05
COL8A1-201ENST00000261037 ERICH2A1L162 156 aa14.71□□□□□ -0.05
COL8A1-201ENST00000261037 CHMP4CQ96CF2 233 aa14.71□□□□□ -0.05
COL8A1-201ENST00000261037 ROCK1Q13464 1354 aa14.71□□□□□ -0.05
COL8A1-201ENST00000261037 MYOM3Q5VTT5 1437 aa14.71□□□□□ -0.05
COL8A1-201ENST00000261037 HSP90AA2PQ14568 343 aaPredicted RBP14.71□□□□□ -0.05
COL8A1-201ENST00000261037 CCDC27Q2M243 656 aa14.71□□□□□ -0.05
COL8A1-201ENST00000261037 TMEM132EQ6IEE7 984 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms