RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 ZSCAN30Q86W11 494 aa18.84■□□□□ 0.61
SLC40A1-201ENST00000261024 ZHX1Q9UKY1 873 aaPredicted RBP18.84■□□□□ 0.61
SLC40A1-201ENST00000261024 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
SLC40A1-201ENST00000261024 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
SLC40A1-201ENST00000261024 NASPP49321 788 aaPredicted RBP18.83■□□□□ 0.61
SLC40A1-201ENST00000261024 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.83■□□□□ 0.61
SLC40A1-201ENST00000261024 PDE3AQ14432 1141 aa18.83■□□□□ 0.6
SLC40A1-201ENST00000261024 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
SLC40A1-201ENST00000261024 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
SLC40A1-201ENST00000261024 TNPO1Q92973 898 aaKnown RBP18.82■□□□□ 0.6
SLC40A1-201ENST00000261024 PCDHB15Q9Y5E8 787 aa18.82■□□□□ 0.6
SLC40A1-201ENST00000261024 OFD1O75665 1012 aa18.82■□□□□ 0.6
SLC40A1-201ENST00000261024 TMF1P82094 1093 aa18.81■□□□□ 0.6
SLC40A1-201ENST00000261024 BCL2L13Q9BXK5 485 aa18.81■□□□□ 0.6
SLC40A1-201ENST00000261024 CCDC173Q0VFZ6 552 aa18.81■□□□□ 0.6
SLC40A1-201ENST00000261024 E9PSI1 815 aa18.81■□□□□ 0.6
SLC40A1-201ENST00000261024 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
SLC40A1-201ENST00000261024 GBP4Q96PP9 640 aa18.8■□□□□ 0.6
SLC40A1-201ENST00000261024 NEUROD2Q15784 382 aa18.8■□□□□ 0.6
SLC40A1-201ENST00000261024 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
SLC40A1-201ENST00000261024 TNNQ9UQP3 1299 aa18.79■□□□□ 0.6
SLC40A1-201ENST00000261024 CAMSAP2Q08AD1 1489 aa18.79■□□□□ 0.6
SLC40A1-201ENST00000261024 UQCRHLA0A096LP55 91 aa18.78■□□□□ 0.6
SLC40A1-201ENST00000261024 UQCRHP07919 91 aa18.78■□□□□ 0.6
SLC40A1-201ENST00000261024 HSP90AB1P08238 724 aaKnown RBP18.78■□□□□ 0.6
SLC40A1-201ENST00000261024 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
SLC40A1-201ENST00000261024 TESK2Q96S53 571 aa18.78■□□□□ 0.6
SLC40A1-201ENST00000261024 TRMT2AQ8IZ69 625 aaKnown RBP18.77■□□□□ 0.6
SLC40A1-201ENST00000261024 XPCQ01831 940 aaPredicted RBP18.77■□□□□ 0.59
SLC40A1-201ENST00000261024 MAP7D2Q96T17 732 aa18.77■□□□□ 0.59
SLC40A1-201ENST00000261024 ARHGEF12Q9NZN5 1544 aa18.76■□□□□ 0.59
SLC40A1-201ENST00000261024 ANKRD30AQ9BXX3 1397 aa18.76■□□□□ 0.59
SLC40A1-201ENST00000261024 ZBTB7CA1YPR0 619 aa18.75■□□□□ 0.59
SLC40A1-201ENST00000261024 ZNF692Q9BU19 519 aaPredicted RBP18.75■□□□□ 0.59
SLC40A1-201ENST00000261024 RWDD1Q9H446 243 aaPredicted RBP18.75■□□□□ 0.59
SLC40A1-201ENST00000261024 RLBP1P12271 317 aa18.74■□□□□ 0.59
SLC40A1-201ENST00000261024 COL17A1Q9UMD9 1497 aaPredicted RBP18.74■□□□□ 0.59
SLC40A1-201ENST00000261024 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
SLC40A1-201ENST00000261024 SKOR2Q2VWA4 1001 aaPredicted RBP18.74■□□□□ 0.59
SLC40A1-201ENST00000261024 ERBINQ96RT1 1412 aa18.73■□□□□ 0.59
SLC40A1-201ENST00000261024 NCLP19338 710 aaKnown RBP18.73■□□□□ 0.59
SLC40A1-201ENST00000261024 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
SLC40A1-201ENST00000261024 FGD1P98174 961 aa18.72■□□□□ 0.59
SLC40A1-201ENST00000261024 DDX49Q9Y6V7 483 aaKnown RBP18.72■□□□□ 0.59
SLC40A1-201ENST00000261024 PPP1R9BQ96SB3 815 aa18.71■□□□□ 0.59
SLC40A1-201ENST00000261024 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.58
SLC40A1-201ENST00000261024 SMAP1Q8IYB5 467 aaPredicted RBP18.7■□□□□ 0.58
SLC40A1-201ENST00000261024 RRP7AQ9Y3A4 280 aaKnown RBP18.7■□□□□ 0.58
SLC40A1-201ENST00000261024 PRAG1Q86YV5 1406 aa18.69■□□□□ 0.58
SLC40A1-201ENST00000261024 GOLGA6L22H0YM25 854 aa18.69■□□□□ 0.58
SLC40A1-201ENST00000261024 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
SLC40A1-201ENST00000261024 RAB3GAP1Q15042 981 aa18.67■□□□□ 0.58
SLC40A1-201ENST00000261024 TERF1P54274 439 aa18.67■□□□□ 0.58
SLC40A1-201ENST00000261024 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
SLC40A1-201ENST00000261024 SSFA2P28290 1259 aa18.65■□□□□ 0.58
SLC40A1-201ENST00000261024 RARSP54136 660 aaKnown RBP18.65■□□□□ 0.58
SLC40A1-201ENST00000261024 NINLQ9Y2I6 1382 aa18.65■□□□□ 0.58
SLC40A1-201ENST00000261024 WWC1Q8IX03 1113 aa18.65■□□□□ 0.58
SLC40A1-201ENST00000261024 FTSJ3Q8IY81 847 aaKnown RBP18.64■□□□□ 0.57
SLC40A1-201ENST00000261024 CCDC144AA2RUR9 1427 aa18.64■□□□□ 0.57
SLC40A1-201ENST00000261024 MAGI2Q86UL8 1455 aa18.64■□□□□ 0.57
SLC40A1-201ENST00000261024 WDR62O43379 1518 aa18.64■□□□□ 0.57
SLC40A1-201ENST00000261024 DDIT3P35638 169 aa18.64■□□□□ 0.57
SLC40A1-201ENST00000261024 CAVIN1Q6NZI2 390 aaKnown RBP18.63■□□□□ 0.57
SLC40A1-201ENST00000261024 PTMSP20962 102 aa18.63■□□□□ 0.57
SLC40A1-201ENST00000261024 SMC5Q8IY18 1101 aa18.63■□□□□ 0.57
SLC40A1-201ENST00000261024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.57
SLC40A1-201ENST00000261024 TSPY4P0CV99 314 aa18.62■□□□□ 0.57
SLC40A1-201ENST00000261024 TSPY10P0CW01 314 aa18.62■□□□□ 0.57
SLC40A1-201ENST00000261024 CIZ1Q9ULV3 898 aaPredicted RBP18.62■□□□□ 0.57
SLC40A1-201ENST00000261024 PRG4Q92954 1404 aaPredicted RBP18.62■□□□□ 0.57
SLC40A1-201ENST00000261024 MTERF4Q7Z6M4 381 aaKnown RBP18.62■□□□□ 0.57
SLC40A1-201ENST00000261024 NOL7Q9UMY1 257 aaKnown RBP18.62■□□□□ 0.57
SLC40A1-201ENST00000261024 DYNC1I1O14576 645 aa18.61■□□□□ 0.57
SLC40A1-201ENST00000261024 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
SLC40A1-201ENST00000261024 TRPM1Q7Z4N2 1603 aa18.6■□□□□ 0.57
SLC40A1-201ENST00000261024 KDM5DQ9BY66 1539 aa18.6■□□□□ 0.57
SLC40A1-201ENST00000261024 CD2BP2O95400 341 aaKnown RBP18.59■□□□□ 0.57
SLC40A1-201ENST00000261024 DNTTIP2Q5QJE6 756 aaKnown RBP18.59■□□□□ 0.57
SLC40A1-201ENST00000261024 KLHL40Q2TBA0 621 aa18.59■□□□□ 0.57
SLC40A1-201ENST00000261024 MCTP1Q6DN14 999 aa18.59■□□□□ 0.57
SLC40A1-201ENST00000261024 ZMYM3Q14202 1370 aa18.59■□□□□ 0.57
SLC40A1-201ENST00000261024 ADGBQ8N7X0 1667 aa18.59■□□□□ 0.57
SLC40A1-201ENST00000261024 ZNF500O60304 480 aaPredicted RBP18.58■□□□□ 0.56
SLC40A1-201ENST00000261024 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.56
SLC40A1-201ENST00000261024 CLASP1Q7Z460 1538 aa18.58■□□□□ 0.56
SLC40A1-201ENST00000261024 TNNT2P45379 298 aaPredicted RBP18.58■□□□□ 0.56
SLC40A1-201ENST00000261024 SNX21Q969T3 373 aa18.58■□□□□ 0.56
SLC40A1-201ENST00000261024 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.56
SLC40A1-201ENST00000261024 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.58■□□□□ 0.56
SLC40A1-201ENST00000261024 PDE4CQ08493 712 aa18.57■□□□□ 0.56
SLC40A1-201ENST00000261024 RBSNQ9H1K0 784 aa18.57■□□□□ 0.56
SLC40A1-201ENST00000261024 CEP170Q5SW79 1584 aa18.57■□□□□ 0.56
SLC40A1-201ENST00000261024 MVPQ14764 893 aaKnown RBP18.57■□□□□ 0.56
SLC40A1-201ENST00000261024 BBXQ8WY36 941 aaPredicted RBP18.57■□□□□ 0.56
SLC40A1-201ENST00000261024 JARID2Q92833 1246 aaPredicted RBP18.57■□□□□ 0.56
SLC40A1-201ENST00000261024 ADGRL2O95490 1459 aa18.56■□□□□ 0.56
SLC40A1-201ENST00000261024 BAG4O95429 457 aaKnown RBP18.56■□□□□ 0.56
SLC40A1-201ENST00000261024 CSPP1Q1MSJ5 1256 aa18.56■□□□□ 0.56
SLC40A1-201ENST00000261024 ZKSCAN5Q9Y2L8 839 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms