RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 PTPRTO14522 1441 aa24.69■■□□□ 1.54
SSB-201ENST00000260956 USP47Q96K76 1375 aa24.68■■□□□ 1.54
SSB-201ENST00000260956 KIF7Q2M1P5 1343 aa24.67■■□□□ 1.54
SSB-201ENST00000260956 SLC52A1Q9NWF4 448 aa24.66■■□□□ 1.54
SSB-201ENST00000260956 PIK3C2BO00750 1634 aa24.66■■□□□ 1.54
SSB-201ENST00000260956 STRCQ7RTU9 1775 aa24.66■■□□□ 1.54
SSB-201ENST00000260956 CCDC144AA2RUR9 1427 aa24.66■■□□□ 1.54
SSB-201ENST00000260956 LAMC1P11047 1609 aa24.65■■□□□ 1.54
SSB-201ENST00000260956 NCKAP5LQ9HCH0 1330 aa24.65■■□□□ 1.54
SSB-201ENST00000260956 THEMISQ8N1K5 641 aaPredicted RBP24.64■■□□□ 1.54
SSB-201ENST00000260956 PRAG1Q86YV5 1406 aa24.64■■□□□ 1.54
SSB-201ENST00000260956 UBR1Q8IWV7 1749 aa24.63■■□□□ 1.53
SSB-201ENST00000260956 TRPM2O94759 1503 aa24.6■■□□□ 1.53
SSB-201ENST00000260956 SPHKAPQ2M3C7 1700 aa24.6■■□□□ 1.53
SSB-201ENST00000260956 GPRASP1Q5JY77 1395 aa24.58■■□□□ 1.53
SSB-201ENST00000260956 LTKP29376 864 aa24.58■■□□□ 1.53
SSB-201ENST00000260956 STAG3Q9UJ98 1225 aa24.58■■□□□ 1.52
SSB-201ENST00000260956 TMEM131LA2VDJ0 1609 aa24.56■■□□□ 1.52
SSB-201ENST00000260956 ADGRB3O60242 1522 aa24.56■■□□□ 1.52
SSB-201ENST00000260956 TMEM2Q9UHN6 1383 aa24.56■■□□□ 1.52
SSB-201ENST00000260956 CLTCL1P53675 1640 aa24.55■■□□□ 1.52
SSB-201ENST00000260956 CHGAP10645 457 aaKnown RBP24.55■■□□□ 1.52
SSB-201ENST00000260956 ARHGAP23Q9P227 1491 aa24.55■■□□□ 1.52
SSB-201ENST00000260956 SLIT1O75093 1534 aa24.53■■□□□ 1.52
SSB-201ENST00000260956 ANKLE2Q86XL3 938 aa24.53■■□□□ 1.52
SSB-201ENST00000260956 NEURL4Q96JN8 1562 aa24.53■■□□□ 1.52
SSB-201ENST00000260956 MYO5BQ9ULV0 1848 aa24.52■■□□□ 1.52
SSB-201ENST00000260956 KDM5AP29375 1690 aaKnown RBP24.51■■□□□ 1.51
SSB-201ENST00000260956 TXNDC2Q86VQ3 553 aa24.51■■□□□ 1.51
SSB-201ENST00000260956 ZNF326Q5BKZ1 582 aaKnown RBP24.5■■□□□ 1.51
SSB-201ENST00000260956 DCAF11Q8TEB1 546 aa24.5■■□□□ 1.51
SSB-201ENST00000260956 PRKRIP1Q9H875 184 aaPredicted RBP24.49■■□□□ 1.51
SSB-201ENST00000260956 ZFYVE9O95405 1425 aa24.48■■□□□ 1.51
SSB-201ENST00000260956 NUTM2DQ5VT03 806 aaPredicted RBP24.48■■□□□ 1.51
SSB-201ENST00000260956 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
SSB-201ENST00000260956 SCAF11Q99590 1463 aaKnown RBP24.46■■□□□ 1.51
SSB-201ENST00000260956 DMRT2Q9Y5R5 561 aa24.46■■□□□ 1.51
SSB-201ENST00000260956 MED14O60244 1454 aa24.46■■□□□ 1.51
SSB-201ENST00000260956 CARD11Q9BXL7 1154 aa24.45■■□□□ 1.5
SSB-201ENST00000260956 RIMS2Q9UQ26 1411 aa24.44■■□□□ 1.5
SSB-201ENST00000260956 ROCK2O75116 1388 aaKnown RBP24.44■■□□□ 1.5
SSB-201ENST00000260956 NPHP4O75161 1426 aaPredicted RBP24.44■■□□□ 1.5
SSB-201ENST00000260956 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
SSB-201ENST00000260956 EID1Q9Y6B2 187 aa24.43■■□□□ 1.5
SSB-201ENST00000260956 IQGAP1P46940 1657 aa24.4■■□□□ 1.5
SSB-201ENST00000260956 CCDC184Q52MB2 194 aa24.4■■□□□ 1.5
SSB-201ENST00000260956 RGL3Q3MIN7 710 aa24.38■■□□□ 1.49
SSB-201ENST00000260956 ZNF335Q9H4Z2 1342 aaPredicted RBP24.37■■□□□ 1.49
SSB-201ENST00000260956 ST20-MTHFSA0A0A6YYL1 179 aa24.37■■□□□ 1.49
SSB-201ENST00000260956 IFT172Q9UG01 1749 aa24.37■■□□□ 1.49
SSB-201ENST00000260956 SUPT16HQ9Y5B9 1047 aaKnown RBP24.36■■□□□ 1.49
SSB-201ENST00000260956 KIF1BO60333 1816 aa24.36■■□□□ 1.49
SSB-201ENST00000260956 SLC26A8Q96RN1 970 aa24.35■■□□□ 1.49
SSB-201ENST00000260956 NEXMIFQ5QGS0 1516 aa24.35■■□□□ 1.49
SSB-201ENST00000260956 NBPF1Q3BBV0 1214 aa24.35■■□□□ 1.49
SSB-201ENST00000260956 KIAA1210Q9ULL0 1709 aa24.34■■□□□ 1.49
SSB-201ENST00000260956 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.32■■□□□ 1.48
SSB-201ENST00000260956 PLEKHG1Q9ULL1 1385 aa24.32■■□□□ 1.48
SSB-201ENST00000260956 HDGFP51858 240 aaKnown RBP24.3■■□□□ 1.48
SSB-201ENST00000260956 MYOM2P54296 1465 aa24.29■■□□□ 1.48
SSB-201ENST00000260956 TESK2Q96S53 571 aa24.29■■□□□ 1.48
SSB-201ENST00000260956 LTBP4Q8N2S1 1624 aa24.29■■□□□ 1.48
SSB-201ENST00000260956 ADAMTS13Q76LX8 1427 aa24.28■■□□□ 1.48
SSB-201ENST00000260956 BCANQ96GW7 911 aa24.27■■□□□ 1.48
SSB-201ENST00000260956 RPGRIP1LQ68CZ1 1315 aa24.27■■□□□ 1.48
SSB-201ENST00000260956 ADGRF5Q8IZF2 1346 aa24.26■■□□□ 1.47
SSB-201ENST00000260956 STAC3Q96MF2 364 aa24.24■■□□□ 1.47
SSB-201ENST00000260956 NRXN3Q9Y4C0 1643 aa24.24■■□□□ 1.47
SSB-201ENST00000260956 NRXN1Q9ULB1 1477 aa24.24■■□□□ 1.47
SSB-201ENST00000260956 DISP3Q9P2K9 1392 aa24.23■■□□□ 1.47
SSB-201ENST00000260956 PPLO60437 1756 aa24.23■■□□□ 1.47
SSB-201ENST00000260956 VGFO15240 615 aaPredicted RBP24.23■■□□□ 1.47
SSB-201ENST00000260956 TBX22Q9Y458 520 aa24.22■■□□□ 1.47
SSB-201ENST00000260956 STRCP1A6NGW2 1772 aa24.22■■□□□ 1.47
SSB-201ENST00000260956 MRS2Q9HD23 443 aa24.21■■□□□ 1.47
SSB-201ENST00000260956 KTN1Q86UP2 1357 aaKnown RBP24.2■■□□□ 1.46
SSB-201ENST00000260956 HNRNPUQ00839 825 aaKnown RBP eCLIP24.2■■□□□ 1.46
SSB-201ENST00000260956 SETBP1Q9Y6X0 1596 aa24.2■■□□□ 1.46
SSB-201ENST00000260956 METP08581 1390 aa24.19■■□□□ 1.46
SSB-201ENST00000260956 CERKQ8TCT0 537 aa24.18■■□□□ 1.46
SSB-201ENST00000260956 PTPRUQ92729 1446 aa24.16■■□□□ 1.46
SSB-201ENST00000260956 KCNA6P17658 529 aa24.15■■□□□ 1.46
SSB-201ENST00000260956 RBM33Q96EV2 1170 aaKnown RBP24.14■■□□□ 1.45
SSB-201ENST00000260956 PARD3Q8TEW0 1356 aa24.14■■□□□ 1.45
SSB-201ENST00000260956 POLR3GLQ9BT43 218 aa24.13■■□□□ 1.45
SSB-201ENST00000260956 ZBED9Q6R2W3 1325 aa24.13■■□□□ 1.45
SSB-201ENST00000260956 MYOM1P52179 1685 aa24.13■■□□□ 1.45
SSB-201ENST00000260956 PER1O15534 1290 aaPredicted RBP24.13■■□□□ 1.45
SSB-201ENST00000260956 PIK3C2GO75747 1445 aa24.13■■□□□ 1.45
SSB-201ENST00000260956 ALKQ9UM73 1620 aa24.12■■□□□ 1.45
SSB-201ENST00000260956 DIP2AQ14689 1571 aa24.11■■□□□ 1.45
SSB-201ENST00000260956 LRRC7Q96NW7 1537 aa24.11■■□□□ 1.45
SSB-201ENST00000260956 LRPPRCP42704 1394 aaKnown RBP24.1■■□□□ 1.45
SSB-201ENST00000260956 SETD1AO15047 1707 aaKnown RBP24.09■■□□□ 1.45
SSB-201ENST00000260956 BRD4O60885 1362 aaPredicted RBP24.09■■□□□ 1.45
SSB-201ENST00000260956 AMOTL2Q9Y2J4 779 aa24.09■■□□□ 1.45
SSB-201ENST00000260956 CPS1P31327 1500 aa24.09■■□□□ 1.45
SSB-201ENST00000260956 CFAP70Q5T0N1 1121 aa24.08■■□□□ 1.45
SSB-201ENST00000260956 CHD2O14647 1828 aaKnown RBP24.08■■□□□ 1.45
SSB-201ENST00000260956 NWD1Q149M9 1564 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms