RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RIMS2Q9UQ26 1411 aa22.76■■□□□ 1.23
CCDC90B-201ENST00000260054 KDM2AQ9Y2K7 1162 aa22.76■■□□□ 1.23
CCDC90B-201ENST00000260054 PPLO60437 1756 aa22.76■■□□□ 1.23
CCDC90B-201ENST00000260054 LMTK3Q96Q04 1460 aa22.75■■□□□ 1.23
CCDC90B-201ENST00000260054 NUTM2DQ5VT03 806 aaPredicted RBP22.75■■□□□ 1.23
CCDC90B-201ENST00000260054 SLIT1O75093 1534 aa22.75■■□□□ 1.23
CCDC90B-201ENST00000260054 ARHGAP23Q9P227 1491 aa22.75■■□□□ 1.23
CCDC90B-201ENST00000260054 MYOM2P54296 1465 aa22.73■■□□□ 1.23
CCDC90B-201ENST00000260054 PPP1R15AO75807 674 aaPredicted RBP22.72■■□□□ 1.23
CCDC90B-201ENST00000260054 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
CCDC90B-201ENST00000260054 ADGRF5Q8IZF2 1346 aa22.71■■□□□ 1.23
CCDC90B-201ENST00000260054 LTKP29376 864 aa22.7■■□□□ 1.22
CCDC90B-201ENST00000260054 STAC3Q96MF2 364 aa22.7■■□□□ 1.22
CCDC90B-201ENST00000260054 VGFO15240 615 aaPredicted RBP22.69■■□□□ 1.22
CCDC90B-201ENST00000260054 HSPA2P54652 639 aa22.68■■□□□ 1.22
CCDC90B-201ENST00000260054 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.68■■□□□ 1.22
CCDC90B-201ENST00000260054 NRXN1Q9ULB1 1477 aa22.68■■□□□ 1.22
CCDC90B-201ENST00000260054 NBPF8Q3BBV2 869 aa22.68■■□□□ 1.22
CCDC90B-201ENST00000260054 TXNDC2Q86VQ3 553 aa22.68■■□□□ 1.22
CCDC90B-201ENST00000260054 PRAG1Q86YV5 1406 aa22.67■■□□□ 1.22
CCDC90B-201ENST00000260054 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
CCDC90B-201ENST00000260054 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
CCDC90B-201ENST00000260054 SCAF11Q99590 1463 aaKnown RBP22.65■■□□□ 1.22
CCDC90B-201ENST00000260054 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
CCDC90B-201ENST00000260054 ANKLE2Q86XL3 938 aa22.64■■□□□ 1.21
CCDC90B-201ENST00000260054 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
CCDC90B-201ENST00000260054 PLEKHG1Q9ULL1 1385 aa22.61■■□□□ 1.21
CCDC90B-201ENST00000260054 NCKAP5LQ9HCH0 1330 aa22.6■■□□□ 1.21
CCDC90B-201ENST00000260054 NRXN3Q9Y4C0 1643 aa22.58■■□□□ 1.21
CCDC90B-201ENST00000260054 POLR1AO95602 1720 aaPredicted RBP22.58■■□□□ 1.2
CCDC90B-201ENST00000260054 SETBP1Q9Y6X0 1596 aa22.58■■□□□ 1.2
CCDC90B-201ENST00000260054 CFAP70Q5T0N1 1121 aa22.58■■□□□ 1.2
CCDC90B-201ENST00000260054 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.2
CCDC90B-201ENST00000260054 TRPM1Q7Z4N2 1603 aa22.56■■□□□ 1.2
CCDC90B-201ENST00000260054 IQGAP1P46940 1657 aa22.56■■□□□ 1.2
CCDC90B-201ENST00000260054 MED14O60244 1454 aa22.56■■□□□ 1.2
CCDC90B-201ENST00000260054 C14orf93Q9H972 538 aaKnown RBP22.56■■□□□ 1.2
CCDC90B-201ENST00000260054 ADAMTS13Q76LX8 1427 aa22.56■■□□□ 1.2
CCDC90B-201ENST00000260054 BCANQ96GW7 911 aa22.55■■□□□ 1.2
CCDC90B-201ENST00000260054 RALGAPBQ86X10 1494 aa22.55■■□□□ 1.2
CCDC90B-201ENST00000260054 ALKQ9UM73 1620 aa22.55■■□□□ 1.2
CCDC90B-201ENST00000260054 NPHP4O75161 1426 aaPredicted RBP22.54■■□□□ 1.2
CCDC90B-201ENST00000260054 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
CCDC90B-201ENST00000260054 KIAA1210Q9ULL0 1709 aa22.53■■□□□ 1.2
CCDC90B-201ENST00000260054 STRCQ7RTU9 1775 aa22.53■■□□□ 1.2
CCDC90B-201ENST00000260054 LAMC1P11047 1609 aa22.52■■□□□ 1.2
CCDC90B-201ENST00000260054 SLC26A8Q96RN1 970 aa22.52■■□□□ 1.2
CCDC90B-201ENST00000260054 SETD1AO15047 1707 aaKnown RBP22.51■■□□□ 1.19
CCDC90B-201ENST00000260054 ROCK2O75116 1388 aaKnown RBP22.51■■□□□ 1.19
CCDC90B-201ENST00000260054 ASXL1Q8IXJ9 1541 aa22.5■■□□□ 1.19
CCDC90B-201ENST00000260054 ADGRB1O14514 1584 aa22.49■■□□□ 1.19
CCDC90B-201ENST00000260054 METP08581 1390 aa22.48■■□□□ 1.19
CCDC90B-201ENST00000260054 GPRASP1Q5JY77 1395 aa22.48■■□□□ 1.19
CCDC90B-201ENST00000260054 TMEM132EQ6IEE7 984 aa22.48■■□□□ 1.19
CCDC90B-201ENST00000260054 DIP2AQ14689 1571 aa22.47■■□□□ 1.19
CCDC90B-201ENST00000260054 TBX22Q9Y458 520 aa22.47■■□□□ 1.19
CCDC90B-201ENST00000260054 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
CCDC90B-201ENST00000260054 YTHDC2Q9H6S0 1430 aaKnown RBP22.41■■□□□ 1.18
CCDC90B-201ENST00000260054 PTPRUQ92729 1446 aa22.4■■□□□ 1.18
CCDC90B-201ENST00000260054 STK26Q9P289 416 aa22.39■■□□□ 1.17
CCDC90B-201ENST00000260054 LRPPRCP42704 1394 aaKnown RBP22.38■■□□□ 1.17
CCDC90B-201ENST00000260054 PIK3R4Q99570 1358 aa22.38■■□□□ 1.17
CCDC90B-201ENST00000260054 TRAK1Q9UPV9 953 aa22.37■■□□□ 1.17
CCDC90B-201ENST00000260054 USP47Q96K76 1375 aa22.36■■□□□ 1.17
CCDC90B-201ENST00000260054 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
CCDC90B-201ENST00000260054 ABCC11Q96J66 1382 aa22.35■■□□□ 1.17
CCDC90B-201ENST00000260054 AMOTL2Q9Y2J4 779 aa22.35■■□□□ 1.17
CCDC90B-201ENST00000260054 CHD2O14647 1828 aaKnown RBP22.34■■□□□ 1.17
CCDC90B-201ENST00000260054 TECPR2O15040 1411 aa22.33■■□□□ 1.17
CCDC90B-201ENST00000260054 XRN1Q8IZH2 1706 aaKnown RBP22.33■■□□□ 1.17
CCDC90B-201ENST00000260054 EIF4G2P78344 907 aaKnown RBP eCLIP22.33■■□□□ 1.16
CCDC90B-201ENST00000260054 KNDC1Q76NI1 1749 aa22.32■■□□□ 1.16
CCDC90B-201ENST00000260054 HSPA5P11021 654 aaKnown RBP22.31■■□□□ 1.16
CCDC90B-201ENST00000260054 KCNA6P17658 529 aa22.31■■□□□ 1.16
CCDC90B-201ENST00000260054 ARHGEF28Q8N1W1 1705 aaKnown RBP22.31■■□□□ 1.16
CCDC90B-201ENST00000260054 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
CCDC90B-201ENST00000260054 ROBO2Q9HCK4 1378 aa22.3■■□□□ 1.16
CCDC90B-201ENST00000260054 NWD1Q149M9 1564 aa22.3■■□□□ 1.16
CCDC90B-201ENST00000260054 CPS1P31327 1500 aa22.3■■□□□ 1.16
CCDC90B-201ENST00000260054 EIF3AQ14152 1382 aaKnown RBP22.29■■□□□ 1.16
CCDC90B-201ENST00000260054 ST20-MTHFSA0A0A6YYL1 179 aa22.29■■□□□ 1.16
CCDC90B-201ENST00000260054 HIRIP3Q9BW71 556 aaPredicted RBP22.29■■□□□ 1.16
CCDC90B-201ENST00000260054 PRAM1Q96QH2 718 aa22.28■■□□□ 1.16
CCDC90B-201ENST00000260054 PTCH1Q13635 1447 aa22.28■■□□□ 1.16
CCDC90B-201ENST00000260054 PLEKHH1Q9ULM0 1364 aa22.27■■□□□ 1.16
CCDC90B-201ENST00000260054 ZNF335Q9H4Z2 1342 aaPredicted RBP22.27■■□□□ 1.16
CCDC90B-201ENST00000260054 WAPLQ7Z5K2 1190 aa22.26■■□□□ 1.15
CCDC90B-201ENST00000260054 SIRT1Q96EB6 747 aa22.26■■□□□ 1.15
CCDC90B-201ENST00000260054 STRCP1A6NGW2 1772 aa22.26■■□□□ 1.15
CCDC90B-201ENST00000260054 FAM135BQ49AJ0 1406 aa22.26■■□□□ 1.15
CCDC90B-201ENST00000260054 CENPJQ9HC77 1338 aaPredicted RBP22.25■■□□□ 1.15
CCDC90B-201ENST00000260054 SAFB2Q14151 953 aaKnown RBP eCLIP22.23■■□□□ 1.15
CCDC90B-201ENST00000260054 POGKQ9P215 609 aa22.23■■□□□ 1.15
CCDC90B-201ENST00000260054 NKTRP30414 1462 aaKnown RBP22.23■■□□□ 1.15
CCDC90B-201ENST00000260054 TESK2Q96S53 571 aa22.23■■□□□ 1.15
CCDC90B-201ENST00000260054 QRICH2Q9H0J4 1663 aa22.21■■□□□ 1.15
CCDC90B-201ENST00000260054 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
CCDC90B-201ENST00000260054 SBNO2Q9Y2G9 1366 aa22.18■■□□□ 1.14
CCDC90B-201ENST00000260054 PROSER2Q86WR7 435 aaPredicted RBP22.17■■□□□ 1.14
CCDC90B-201ENST00000260054 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms