RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 ZNF335Q9H4Z2 1342 aaPredicted RBP22.41■■□□□ 1.18
GYPC-201ENST00000259254 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
GYPC-201ENST00000259254 MED14O60244 1454 aa22.4■■□□□ 1.18
GYPC-201ENST00000259254 IQGAP1P46940 1657 aa22.39■■□□□ 1.18
GYPC-201ENST00000259254 PIK3C2BO00750 1634 aa22.39■■□□□ 1.18
GYPC-201ENST00000259254 ANKLE2Q86XL3 938 aa22.39■■□□□ 1.17
GYPC-201ENST00000259254 DCAF11Q8TEB1 546 aa22.38■■□□□ 1.17
GYPC-201ENST00000259254 KDM5AP29375 1690 aaKnown RBP22.37■■□□□ 1.17
GYPC-201ENST00000259254 KDM2AQ9Y2K7 1162 aa22.37■■□□□ 1.17
GYPC-201ENST00000259254 NPHP4O75161 1426 aaPredicted RBP22.37■■□□□ 1.17
GYPC-201ENST00000259254 ADGRB3O60242 1522 aa22.36■■□□□ 1.17
GYPC-201ENST00000259254 PPP1R15AO75807 674 aaPredicted RBP22.34■■□□□ 1.17
GYPC-201ENST00000259254 SLIT1O75093 1534 aa22.34■■□□□ 1.17
GYPC-201ENST00000259254 ARHGAP23Q9P227 1491 aa22.33■■□□□ 1.16
GYPC-201ENST00000259254 KIF1BO60333 1816 aa22.31■■□□□ 1.16
GYPC-201ENST00000259254 CPS1P31327 1500 aa22.31■■□□□ 1.16
GYPC-201ENST00000259254 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
GYPC-201ENST00000259254 SCAF11Q99590 1463 aaKnown RBP22.3■■□□□ 1.16
GYPC-201ENST00000259254 TMEM131LA2VDJ0 1609 aa22.29■■□□□ 1.16
GYPC-201ENST00000259254 NUTM2DQ5VT03 806 aaPredicted RBP22.26■■□□□ 1.15
GYPC-201ENST00000259254 STAC3Q96MF2 364 aa22.26■■□□□ 1.15
GYPC-201ENST00000259254 STRCP1A6NGW2 1772 aa22.25■■□□□ 1.15
GYPC-201ENST00000259254 TMEM2Q9UHN6 1383 aa22.25■■□□□ 1.15
GYPC-201ENST00000259254 MYO5BQ9ULV0 1848 aa22.24■■□□□ 1.15
GYPC-201ENST00000259254 RIMS2Q9UQ26 1411 aa22.23■■□□□ 1.15
GYPC-201ENST00000259254 VGFO15240 615 aaPredicted RBP22.23■■□□□ 1.15
GYPC-201ENST00000259254 NBPF8Q3BBV2 869 aa22.23■■□□□ 1.15
GYPC-201ENST00000259254 LTKP29376 864 aa22.22■■□□□ 1.15
GYPC-201ENST00000259254 HDGFP51858 240 aaKnown RBP22.22■■□□□ 1.15
GYPC-201ENST00000259254 TXNDC2Q86VQ3 553 aa22.22■■□□□ 1.15
GYPC-201ENST00000259254 MYOM2P54296 1465 aa22.22■■□□□ 1.15
GYPC-201ENST00000259254 NEXMIFQ5QGS0 1516 aa22.21■■□□□ 1.15
GYPC-201ENST00000259254 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
GYPC-201ENST00000259254 ADGRF5Q8IZF2 1346 aa22.21■■□□□ 1.15
GYPC-201ENST00000259254 PRAG1Q86YV5 1406 aa22.21■■□□□ 1.15
GYPC-201ENST00000259254 EID1Q9Y6B2 187 aa22.2■■□□□ 1.14
GYPC-201ENST00000259254 UBAP1LF5GYI3 381 aa22.18■■□□□ 1.14
GYPC-201ENST00000259254 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
GYPC-201ENST00000259254 ZFYVE9O95405 1425 aa22.16■■□□□ 1.14
GYPC-201ENST00000259254 BCANQ96GW7 911 aa22.15■■□□□ 1.14
GYPC-201ENST00000259254 LRRC7Q96NW7 1537 aa22.14■■□□□ 1.13
GYPC-201ENST00000259254 PPLO60437 1756 aa22.14■■□□□ 1.13
GYPC-201ENST00000259254 IFT172Q9UG01 1749 aa22.14■■□□□ 1.13
GYPC-201ENST00000259254 NRXN1Q9ULB1 1477 aa22.13■■□□□ 1.13
GYPC-201ENST00000259254 RALGAPBQ86X10 1494 aa22.12■■□□□ 1.13
GYPC-201ENST00000259254 PIK3C2GO75747 1445 aa22.12■■□□□ 1.13
GYPC-201ENST00000259254 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
GYPC-201ENST00000259254 CFAP70Q5T0N1 1121 aa22.11■■□□□ 1.13
GYPC-201ENST00000259254 XIRP1Q702N8 1843 aaKnown RBP22.1■■□□□ 1.13
GYPC-201ENST00000259254 CARD11Q9BXL7 1154 aa22.09■■□□□ 1.13
GYPC-201ENST00000259254 ALKQ9UM73 1620 aa22.09■■□□□ 1.13
GYPC-201ENST00000259254 NBPF1Q3BBV0 1214 aa22.08■■□□□ 1.13
GYPC-201ENST00000259254 C14orf93Q9H972 538 aaKnown RBP22.07■■□□□ 1.12
GYPC-201ENST00000259254 TOM1O60784 492 aa22.06■■□□□ 1.12
GYPC-201ENST00000259254 PLEKHG1Q9ULL1 1385 aa22.06■■□□□ 1.12
GYPC-201ENST00000259254 NWD1Q149M9 1564 aa22.05■■□□□ 1.12
GYPC-201ENST00000259254 TRPM1Q7Z4N2 1603 aa22.05■■□□□ 1.12
GYPC-201ENST00000259254 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
GYPC-201ENST00000259254 CHD2O14647 1828 aaKnown RBP22.01■■□□□ 1.11
GYPC-201ENST00000259254 GPRASP1Q5JY77 1395 aa22.01■■□□□ 1.11
GYPC-201ENST00000259254 EIF4G2P78344 907 aaKnown RBP eCLIP22.01■■□□□ 1.112e-8■■■■■ 45.9
GYPC-201ENST00000259254 TMEM132EQ6IEE7 984 aa22.01■■□□□ 1.11
GYPC-201ENST00000259254 PIP4K2BP78356 416 aa22■■□□□ 1.11
GYPC-201ENST00000259254 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
GYPC-201ENST00000259254 NKTRP30414 1462 aaKnown RBP21.99■■□□□ 1.11
GYPC-201ENST00000259254 KCNA6P17658 529 aa21.99■■□□□ 1.11
GYPC-201ENST00000259254 SETBP1Q9Y6X0 1596 aa21.99■■□□□ 1.11
GYPC-201ENST00000259254 LAMC1P11047 1609 aa21.98■■□□□ 1.11
GYPC-201ENST00000259254 KIAA1210Q9ULL0 1709 aa21.98■■□□□ 1.11
GYPC-201ENST00000259254 USP47Q96K76 1375 aa21.98■■□□□ 1.11
GYPC-201ENST00000259254 DIP2AQ14689 1571 aa21.97■■□□□ 1.11
GYPC-201ENST00000259254 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
GYPC-201ENST00000259254 ADAMTS13Q76LX8 1427 aa21.96■■□□□ 1.11
GYPC-201ENST00000259254 STK26Q9P289 416 aa21.95■■□□□ 1.1
GYPC-201ENST00000259254 HIRIP3Q9BW71 556 aaPredicted RBP21.94■■□□□ 1.1
GYPC-201ENST00000259254 TBX22Q9Y458 520 aa21.94■■□□□ 1.1
GYPC-201ENST00000259254 TMEM94Q12767 1356 aa21.94■■□□□ 1.1
GYPC-201ENST00000259254 ADGRB1O14514 1584 aa21.94■■□□□ 1.1
GYPC-201ENST00000259254 NRXN3Q9Y4C0 1643 aa21.94■■□□□ 1.1
GYPC-201ENST00000259254 METP08581 1390 aa21.93■■□□□ 1.1
GYPC-201ENST00000259254 HSPA1LP34931 641 aa21.93■■□□□ 1.1
GYPC-201ENST00000259254 TRAK1Q9UPV9 953 aa21.93■■□□□ 1.1
GYPC-201ENST00000259254 ASXL1Q8IXJ9 1541 aa21.92■■□□□ 1.1
GYPC-201ENST00000259254 EIF3AQ14152 1382 aaKnown RBP21.92■■□□□ 1.1
GYPC-201ENST00000259254 DISP3Q9P2K9 1392 aa21.92■■□□□ 1.1
GYPC-201ENST00000259254 YTHDC2Q9H6S0 1430 aaKnown RBP21.9■■□□□ 1.1
GYPC-201ENST00000259254 PROSER2Q86WR7 435 aaPredicted RBP21.9■■□□□ 1.1
GYPC-201ENST00000259254 LRPPRCP42704 1394 aaKnown RBP21.89■■□□□ 1.1
GYPC-201ENST00000259254 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.09
GYPC-201ENST00000259254 ST20-MTHFSA0A0A6YYL1 179 aa21.88■■□□□ 1.09
GYPC-201ENST00000259254 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
GYPC-201ENST00000259254 SETD1AO15047 1707 aaKnown RBP21.84■■□□□ 1.09
GYPC-201ENST00000259254 RBM33Q96EV2 1170 aaKnown RBP21.84■■□□□ 1.09
GYPC-201ENST00000259254 POGKQ9P215 609 aa21.84■■□□□ 1.09
GYPC-201ENST00000259254 CENPJQ9HC77 1338 aaPredicted RBP21.83■■□□□ 1.09
GYPC-201ENST00000259254 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
GYPC-201ENST00000259254 ABCC11Q96J66 1382 aa21.83■■□□□ 1.08
GYPC-201ENST00000259254 XRN1Q8IZH2 1706 aaKnown RBP21.83■■□□□ 1.08
GYPC-201ENST00000259254 ROBO1Q9Y6N7 1651 aa21.82■■□□□ 1.08
GYPC-201ENST00000259254 PRAM1Q96QH2 718 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms