RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
ALPK3-201ENST00000258888 TPD52L1Q16890 204 aaPredicted RBP16.47■□□□□ 0.23
ALPK3-201ENST00000258888 CCDC7Q96M83 1385 aa16.47■□□□□ 0.23
ALPK3-201ENST00000258888 ANO2Q9NQ90 1003 aa16.47■□□□□ 0.23
ALPK3-201ENST00000258888 MARCH6O60337 910 aa16.47■□□□□ 0.23
ALPK3-201ENST00000258888 RIPK4P57078 832 aa16.46■□□□□ 0.23
ALPK3-201ENST00000258888 C9orf78Q9NZ63 289 aaPredicted RBP16.46■□□□□ 0.23
ALPK3-201ENST00000258888 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
ALPK3-201ENST00000258888 VGFO15240 615 aaPredicted RBP16.46■□□□□ 0.23
ALPK3-201ENST00000258888 TEFQ10587 303 aa16.45■□□□□ 0.22
ALPK3-201ENST00000258888 ATAD2BQ9ULI0 1458 aa16.45■□□□□ 0.22
ALPK3-201ENST00000258888 G3V3G9 751 aa16.45■□□□□ 0.22
ALPK3-201ENST00000258888 DCAF8Q5TAQ9 597 aa16.45■□□□□ 0.22
ALPK3-201ENST00000258888 CNTLNQ9NXG0 1405 aa16.45■□□□□ 0.22
ALPK3-201ENST00000258888 DIAPH1O60610 1272 aaKnown RBP16.45■□□□□ 0.22
ALPK3-201ENST00000258888 FGD6Q6ZV73 1430 aa16.45■□□□□ 0.22
ALPK3-201ENST00000258888 ZNF592Q92610 1267 aa16.44■□□□□ 0.22
ALPK3-201ENST00000258888 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
ALPK3-201ENST00000258888 PANK1Q8TE04 598 aa16.44■□□□□ 0.22
ALPK3-201ENST00000258888 CUX1P39880 1505 aa16.43■□□□□ 0.22
ALPK3-201ENST00000258888 RUFY2Q8WXA3 655 aa16.43■□□□□ 0.22
ALPK3-201ENST00000258888 AKAP17AQ02040 695 aaKnown RBP16.43■□□□□ 0.22
ALPK3-201ENST00000258888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.43■□□□□ 0.22
ALPK3-201ENST00000258888 ANO8Q9HCE9 1232 aaPredicted RBP16.43■□□□□ 0.22
ALPK3-201ENST00000258888 PTPRGP23470 1445 aa16.43■□□□□ 0.22
ALPK3-201ENST00000258888 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
ALPK3-201ENST00000258888 NEXNQ0ZGT2 675 aa16.42■□□□□ 0.22
ALPK3-201ENST00000258888 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
ALPK3-201ENST00000258888 MYOM3Q5VTT5 1437 aa16.42■□□□□ 0.22
ALPK3-201ENST00000258888 API5Q9BZZ5 524 aaKnown RBP16.41■□□□□ 0.22
ALPK3-201ENST00000258888 LNPKQ9C0E8 428 aa16.41■□□□□ 0.22
ALPK3-201ENST00000258888 RUNDC1Q96C34 613 aa16.41■□□□□ 0.22
ALPK3-201ENST00000258888 TSR1Q2NL82 804 aaKnown RBP16.41■□□□□ 0.22
ALPK3-201ENST00000258888 CHMP5Q9NZZ3 219 aa16.41■□□□□ 0.22
ALPK3-201ENST00000258888 TTC5Q8N0Z6 440 aa16.41■□□□□ 0.22
ALPK3-201ENST00000258888 ROCK1Q13464 1354 aa16.4■□□□□ 0.22
ALPK3-201ENST00000258888 VPS37CA5D8V6 355 aaPredicted RBP16.4■□□□□ 0.22
ALPK3-201ENST00000258888 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
ALPK3-201ENST00000258888 FOSBP53539 338 aa16.39■□□□□ 0.22
ALPK3-201ENST00000258888 BICD2Q8TD16 824 aa16.39■□□□□ 0.21
ALPK3-201ENST00000258888 FBXW7Q969H0 707 aa16.39■□□□□ 0.21
ALPK3-201ENST00000258888 ZNF644Q9H582 1327 aaPredicted RBP16.39■□□□□ 0.21
ALPK3-201ENST00000258888 TPM1P09493 284 aa16.39■□□□□ 0.21
ALPK3-201ENST00000258888 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.21
ALPK3-201ENST00000258888 CEP89Q96ST8 783 aa16.39■□□□□ 0.21
ALPK3-201ENST00000258888 CPLX1O14810 134 aa16.38■□□□□ 0.21
ALPK3-201ENST00000258888 HMOX1P09601 288 aa16.38■□□□□ 0.21
ALPK3-201ENST00000258888 SYNE3Q6ZMZ3 975 aa16.38■□□□□ 0.21
ALPK3-201ENST00000258888 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
ALPK3-201ENST00000258888 APPP05067 770 aa16.37■□□□□ 0.21
ALPK3-201ENST00000258888 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
ALPK3-201ENST00000258888 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
ALPK3-201ENST00000258888 KIF21BO75037 1637 aa16.37■□□□□ 0.21
ALPK3-201ENST00000258888 PRM3Q9NNZ6 103 aa16.36■□□□□ 0.21
ALPK3-201ENST00000258888 FAM13BQ9NYF5 915 aa16.36■□□□□ 0.21
ALPK3-201ENST00000258888 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
ALPK3-201ENST00000258888 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
ALPK3-201ENST00000258888 TRIM29Q14134 588 aa16.35■□□□□ 0.21
ALPK3-201ENST00000258888 G3BP1Q13283 466 aaKnown RBP eCLIP16.35■□□□□ 0.21
ALPK3-201ENST00000258888 PODXL2Q9NZ53 605 aa16.35■□□□□ 0.21
ALPK3-201ENST00000258888 CPLX2Q6PUV4 134 aaKnown RBP16.34■□□□□ 0.21
ALPK3-201ENST00000258888 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.34■□□□□ 0.21
ALPK3-201ENST00000258888 GAPVD1Q14C86 1478 aa16.34■□□□□ 0.21
ALPK3-201ENST00000258888 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
ALPK3-201ENST00000258888 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
ALPK3-201ENST00000258888 SMC3Q9UQE7 1217 aa16.34■□□□□ 0.21
ALPK3-201ENST00000258888 TPM2P07951 284 aa16.34■□□□□ 0.21
ALPK3-201ENST00000258888 LRRC9Q6ZRR7 1453 aa16.33■□□□□ 0.21
ALPK3-201ENST00000258888 TSPYL4Q9UJ04 414 aa16.33■□□□□ 0.21
ALPK3-201ENST00000258888 RNF20Q5VTR2 975 aa16.33■□□□□ 0.2
ALPK3-201ENST00000258888 ZNF771Q7L3S4 317 aaPredicted RBP16.33■□□□□ 0.2
ALPK3-201ENST00000258888 GNAI1P63096 354 aa16.32■□□□□ 0.2
ALPK3-201ENST00000258888 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
ALPK3-201ENST00000258888 ADAMTS8Q9UP79 889 aa16.32■□□□□ 0.2
ALPK3-201ENST00000258888 RAD21O60216 631 aa16.32■□□□□ 0.2
ALPK3-201ENST00000258888 BRD4O60885 1362 aaPredicted RBP16.32■□□□□ 0.2
ALPK3-201ENST00000258888 HOMER1Q86YM7 354 aa16.32■□□□□ 0.2
ALPK3-201ENST00000258888 PCMTD1Q96MG8 357 aaPredicted RBP16.32■□□□□ 0.2
ALPK3-201ENST00000258888 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
ALPK3-201ENST00000258888 NUCB2P80303 420 aa16.32■□□□□ 0.2
ALPK3-201ENST00000258888 EVA1CP58658 441 aa16.31■□□□□ 0.2
ALPK3-201ENST00000258888 NFXL1Q6ZNB6 911 aa16.31■□□□□ 0.2
ALPK3-201ENST00000258888 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
ALPK3-201ENST00000258888 GGNBP2Q9H3C7 697 aa16.31■□□□□ 0.2
ALPK3-201ENST00000258888 CDC45O75419 566 aa16.31■□□□□ 0.2
ALPK3-201ENST00000258888 CCDC70Q6NSX1 233 aa16.3■□□□□ 0.2
ALPK3-201ENST00000258888 DDX58O95786 925 aaKnown RBP16.3■□□□□ 0.2
ALPK3-201ENST00000258888 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
ALPK3-201ENST00000258888 CDCA7LQ96GN5 454 aa16.3■□□□□ 0.2
ALPK3-201ENST00000258888 IPO7O95373 1038 aaKnown RBP16.29■□□□□ 0.2
ALPK3-201ENST00000258888 ANKRD50Q9ULJ7 1429 aa16.29■□□□□ 0.2
ALPK3-201ENST00000258888 NCOA2Q15596 1464 aa16.29■□□□□ 0.2
ALPK3-201ENST00000258888 TRDNQ13061 729 aa16.29■□□□□ 0.2
ALPK3-201ENST00000258888 IGF1RP08069 1367 aa16.29■□□□□ 0.2
ALPK3-201ENST00000258888 SYTL4Q96C24 671 aaPredicted RBP16.28■□□□□ 0.2
ALPK3-201ENST00000258888 MIA2Q96PC5 1412 aa16.28■□□□□ 0.2
ALPK3-201ENST00000258888 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
ALPK3-201ENST00000258888 ERC2O15083 957 aa16.28■□□□□ 0.2
ALPK3-201ENST00000258888 GPS2Q13227 327 aa16.28■□□□□ 0.2
ALPK3-201ENST00000258888 ANKRD20A12PQ8NF67 263 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms