RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 NKTRP30414 1462 aaKnown RBP28.62■■■□□ 2.17
KHDC1-201ENST00000257765 FAM135BQ49AJ0 1406 aa28.6■■■□□ 2.17
KHDC1-201ENST00000257765 TMEM131LA2VDJ0 1609 aa28.58■■■□□ 2.17
KHDC1-201ENST00000257765 ROBO1Q9Y6N7 1651 aa28.58■■■□□ 2.16
KHDC1-201ENST00000257765 ZFYVE9O95405 1425 aa28.57■■■□□ 2.16
KHDC1-201ENST00000257765 PROSER2Q86WR7 435 aaPredicted RBP28.56■■■□□ 2.16
KHDC1-201ENST00000257765 BCANQ96GW7 911 aa28.55■■■□□ 2.16
KHDC1-201ENST00000257765 CHD2O14647 1828 aaKnown RBP28.54■■■□□ 2.16
KHDC1-201ENST00000257765 E9PCH4 1651 aa28.54■■■□□ 2.16
KHDC1-201ENST00000257765 PLEKHG1Q9ULL1 1385 aa28.53■■■□□ 2.16
KHDC1-201ENST00000257765 RIMS2Q9UQ26 1411 aa28.52■■■□□ 2.16
KHDC1-201ENST00000257765 RBM33Q96EV2 1170 aaKnown RBP28.51■■■□□ 2.15
KHDC1-201ENST00000257765 IQGAP3Q86VI3 1631 aa28.51■■■□□ 2.15
KHDC1-201ENST00000257765 PPP1R15AO75807 674 aaPredicted RBP28.49■■■□□ 2.15
KHDC1-201ENST00000257765 MSH6P52701 1360 aa28.49■■■□□ 2.15
KHDC1-201ENST00000257765 ROCK1Q13464 1354 aa28.49■■■□□ 2.15
KHDC1-201ENST00000257765 HDGFP51858 240 aaKnown RBP28.48■■■□□ 2.15
KHDC1-201ENST00000257765 CHGAP10645 457 aaKnown RBP28.43■■■□□ 2.14
KHDC1-201ENST00000257765 DIP2AQ14689 1571 aa28.42■■■□□ 2.14
KHDC1-201ENST00000257765 RGS17Q9UGC6 210 aaPredicted RBP28.42■■■□□ 2.14
KHDC1-201ENST00000257765 PHLPP1O60346 1717 aa28.42■■■□□ 2.14
KHDC1-201ENST00000257765 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.41■■■□□ 2.14
KHDC1-201ENST00000257765 TBX22Q9Y458 520 aa28.39■■■□□ 2.14
KHDC1-201ENST00000257765 ADAMTS13Q76LX8 1427 aa28.38■■■□□ 2.13
KHDC1-201ENST00000257765 NCOA3Q9Y6Q9 1424 aa28.36■■■□□ 2.13
KHDC1-201ENST00000257765 SLAIN2Q9P270 581 aa28.36■■■□□ 2.13
KHDC1-201ENST00000257765 NUP155O75694 1391 aa28.36■■■□□ 2.13
KHDC1-201ENST00000257765 NUTM2DQ5VT03 806 aaPredicted RBP28.33■■■□□ 2.13
KHDC1-201ENST00000257765 PIK3R4Q99570 1358 aa28.33■■■□□ 2.13
KHDC1-201ENST00000257765 TRPM2O94759 1503 aa28.33■■■□□ 2.13
KHDC1-201ENST00000257765 SPHKAPQ2M3C7 1700 aa28.32■■■□□ 2.12
KHDC1-201ENST00000257765 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.32■■■□□ 2.12
KHDC1-201ENST00000257765 ITGAEP38570 1179 aa28.31■■■□□ 2.12
KHDC1-201ENST00000257765 COL16A1Q07092 1604 aaPredicted RBP28.31■■■□□ 2.12
KHDC1-201ENST00000257765 JCADQ9P266 1359 aa28.29■■■□□ 2.12
KHDC1-201ENST00000257765 C14orf37Q86TY3 774 aa28.29■■■□□ 2.12
KHDC1-201ENST00000257765 POTEAQ6S8J7 498 aa28.26■■■□□ 2.11
KHDC1-201ENST00000257765 NRXN3Q9Y4C0 1643 aa28.25■■■□□ 2.11
KHDC1-201ENST00000257765 AHDC1Q5TGY3 1603 aaPredicted RBP28.23■■■□□ 2.11
KHDC1-201ENST00000257765 CADPS2Q86UW7 1296 aa28.23■■■□□ 2.11
KHDC1-201ENST00000257765 XRN1Q8IZH2 1706 aaKnown RBP28.22■■■□□ 2.11
KHDC1-201ENST00000257765 PTPRUQ92729 1446 aa28.22■■■□□ 2.11
KHDC1-201ENST00000257765 SETBP1Q9Y6X0 1596 aa28.22■■■□□ 2.11
KHDC1-201ENST00000257765 C19orf44Q9H6X5 657 aa28.21■■■□□ 2.11
KHDC1-201ENST00000257765 ATF3P18847 181 aa28.2■■■□□ 2.1
KHDC1-201ENST00000257765 PPARGC1BQ86YN6 1023 aaKnown RBP28.2■■■□□ 2.1
KHDC1-201ENST00000257765 AMOTL2Q9Y2J4 779 aa28.19■■■□□ 2.1
KHDC1-201ENST00000257765 SHPRHQ149N8 1683 aa28.19■■■□□ 2.1
KHDC1-201ENST00000257765 CLTCL1P53675 1640 aa28.16■■■□□ 2.1
KHDC1-201ENST00000257765 DCCP43146 1447 aa28.16■■■□□ 2.1
KHDC1-201ENST00000257765 SETD1AO15047 1707 aaKnown RBP28.15■■■□□ 2.1
KHDC1-201ENST00000257765 LRP6O75581 1613 aa28.15■■■□□ 2.1
KHDC1-201ENST00000257765 SPATA31A6Q5VVP1 1343 aa28.15■■■□□ 2.1
KHDC1-201ENST00000257765 ZNF326Q5BKZ1 582 aaKnown RBP28.14■■■□□ 2.1
KHDC1-201ENST00000257765 KIF1BO60333 1816 aa28.12■■■□□ 2.09
KHDC1-201ENST00000257765 NEXMIFQ5QGS0 1516 aa28.12■■■□□ 2.09
KHDC1-201ENST00000257765 RRBP1Q9P2E9 1410 aaKnown RBP28.09■■■□□ 2.09
KHDC1-201ENST00000257765 ASXL1Q8IXJ9 1541 aa28.08■■■□□ 2.09
KHDC1-201ENST00000257765 BRINP3Q76B58 766 aa28.08■■■□□ 2.09
KHDC1-201ENST00000257765 METP08581 1390 aa28.08■■■□□ 2.09
KHDC1-201ENST00000257765 MEX3CQ5U5Q3 659 aaKnown RBP28.07■■■□□ 2.08
KHDC1-201ENST00000257765 NHSL1Q5SYE7 1610 aa28.07■■■□□ 2.08
KHDC1-201ENST00000257765 MST1RQ04912 1400 aa28.06■■■□□ 2.08
KHDC1-201ENST00000257765 NAIPQ13075 1403 aa28.06■■■□□ 2.08
KHDC1-201ENST00000257765 NALCNQ8IZF0 1738 aa28.05■■■□□ 2.08
KHDC1-201ENST00000257765 ADGRL3Q9HAR2 1447 aa28.02■■■□□ 2.08
KHDC1-201ENST00000257765 ZNF772Q68DY9 489 aaPredicted RBP28.01■■■□□ 2.07
KHDC1-201ENST00000257765 SETD5Q9C0A6 1442 aa27.99■■■□□ 2.07
KHDC1-201ENST00000257765 HFM1A2PYH4 1435 aa27.94■■■□□ 2.06
KHDC1-201ENST00000257765 NUTM2BA6NNL0 878 aaPredicted RBP27.94■■■□□ 2.06
KHDC1-201ENST00000257765 NUTM2EB1AL46 878 aaPredicted RBP27.94■■■□□ 2.06
KHDC1-201ENST00000257765 NUTM2AQ8IVF1 878 aaPredicted RBP27.94■■■□□ 2.06
KHDC1-201ENST00000257765 PTCH1Q13635 1447 aa27.93■■■□□ 2.06
KHDC1-201ENST00000257765 PPLO60437 1756 aa27.91■■■□□ 2.06
KHDC1-201ENST00000257765 TRIM52Q96A61 297 aa27.91■■■□□ 2.06
KHDC1-201ENST00000257765 LRRC59Q96AG4 307 aaKnown RBP27.9■■■□□ 2.06
KHDC1-201ENST00000257765 VGFO15240 615 aaPredicted RBP27.89■■■□□ 2.06
KHDC1-201ENST00000257765 C1orf167Q5SNV9 1468 aa27.88■■■□□ 2.05
KHDC1-201ENST00000257765 PRAG1Q86YV5 1406 aa27.87■■■□□ 2.05
KHDC1-201ENST00000257765 LAMC1P11047 1609 aa27.87■■■□□ 2.05
KHDC1-201ENST00000257765 PNPLA6Q8IY17 1366 aa27.86■■■□□ 2.05
KHDC1-201ENST00000257765 AFF2P51816 1311 aa27.86■■■□□ 2.05
KHDC1-201ENST00000257765 CDK12Q9NYV4 1490 aaPredicted RBP27.85■■■□□ 2.05
KHDC1-201ENST00000257765 RXRBP28702 533 aa27.85■■■□□ 2.05
KHDC1-201ENST00000257765 DDX17Q92841 729 aaKnown RBP27.85■■■□□ 2.05
KHDC1-201ENST00000257765 SLC4A1APQ9BWU0 796 aaKnown RBP27.85■■■□□ 2.05
KHDC1-201ENST00000257765 RPGRIP1LQ68CZ1 1315 aa27.85■■■□□ 2.05
KHDC1-201ENST00000257765 ROBO2Q9HCK4 1378 aa27.85■■■□□ 2.05
KHDC1-201ENST00000257765 UPF1Q92900 1129 aaKnown RBP eCLIP27.79■■■□□ 2.04
KHDC1-201ENST00000257765 C8orf37Q96NL8 207 aa27.78■■■□□ 2.04
KHDC1-201ENST00000257765 CDC42BPGQ6DT37 1551 aa27.75■■■□□ 2.03
KHDC1-201ENST00000257765 ORAI2Q96SN7 254 aa27.74■■■□□ 2.03
KHDC1-201ENST00000257765 SOS2Q07890 1332 aaPredicted RBP27.73■■■□□ 2.03
KHDC1-201ENST00000257765 IFT172Q9UG01 1749 aa27.73■■■□□ 2.03
KHDC1-201ENST00000257765 CCDC144AA2RUR9 1427 aa27.72■■■□□ 2.03
KHDC1-201ENST00000257765 RGS12O14924 1447 aa27.71■■■□□ 2.03
KHDC1-201ENST00000257765 COL22A1Q8NFW1 1626 aaPredicted RBP27.7■■■□□ 2.03
KHDC1-201ENST00000257765 FOXD1Q16676 465 aa27.7■■■□□ 2.02
KHDC1-201ENST00000257765 ADAMTS2O95450 1211 aa27.69■■■□□ 2.02
KHDC1-201ENST00000257765 RBM6P78332 1123 aaKnown RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms