RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 BECN2A8MW95 431 aa13.41□□□□□ -0.26
DCLK1-201ENST00000255448 HMMRO75330 724 aa13.41□□□□□ -0.26
DCLK1-201ENST00000255448 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
DCLK1-201ENST00000255448 FAM69CQ0P6D2 419 aa13.41□□□□□ -0.26
DCLK1-201ENST00000255448 CCDC146Q8IYE0 955 aa13.41□□□□□ -0.26
DCLK1-201ENST00000255448 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
DCLK1-201ENST00000255448 TPM3P06753 285 aa13.4□□□□□ -0.26
DCLK1-201ENST00000255448 HSP90B1P14625 803 aaKnown RBP13.4□□□□□ -0.26
DCLK1-201ENST00000255448 PDCL3Q9H2J4 239 aa13.4□□□□□ -0.26
DCLK1-201ENST00000255448 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
DCLK1-201ENST00000255448 ZNF330Q9Y3S2 320 aaPredicted RBP13.4□□□□□ -0.26
DCLK1-201ENST00000255448 ARGLU1Q9NWB6 273 aaPredicted RBP13.4□□□□□ -0.26
DCLK1-201ENST00000255448 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
DCLK1-201ENST00000255448 TMX4Q9H1E5 349 aaPredicted RBP13.39□□□□□ -0.27
DCLK1-201ENST00000255448 GRPEL1Q9HAV7 217 aa13.39□□□□□ -0.27
DCLK1-201ENST00000255448 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
DCLK1-201ENST00000255448 STAC3Q96MF2 364 aa13.39□□□□□ -0.27
DCLK1-201ENST00000255448 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
DCLK1-201ENST00000255448 CUX1P39880 1505 aa13.39□□□□□ -0.27
DCLK1-201ENST00000255448 AEBP1Q8IUX7 1158 aa13.38□□□□□ -0.27
DCLK1-201ENST00000255448 COG6Q9Y2V7 657 aa13.38□□□□□ -0.27
DCLK1-201ENST00000255448 ST20-MTHFSA0A0A6YYL1 179 aa13.38□□□□□ -0.27
DCLK1-201ENST00000255448 GPATCH3Q96I76 525 aa13.38□□□□□ -0.27
DCLK1-201ENST00000255448 CGNL1Q0VF96 1302 aa13.37□□□□□ -0.27
DCLK1-201ENST00000255448 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
DCLK1-201ENST00000255448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.37□□□□□ -0.27
DCLK1-201ENST00000255448 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.37□□□□□ -0.27
DCLK1-201ENST00000255448 BACH2Q9BYV9 841 aa13.37□□□□□ -0.27
DCLK1-201ENST00000255448 AQRO60306 1485 aaKnown RBP eCLIP13.37□□□□□ -0.27
DCLK1-201ENST00000255448 TAF3Q5VWG9 929 aa13.37□□□□□ -0.27
DCLK1-201ENST00000255448 C22orf23Q9BZE7 217 aa13.36□□□□□ -0.27
DCLK1-201ENST00000255448 BBXQ8WY36 941 aaPredicted RBP13.36□□□□□ -0.27
DCLK1-201ENST00000255448 COG3Q96JB2 828 aa13.36□□□□□ -0.27
DCLK1-201ENST00000255448 CAVIN1Q6NZI2 390 aaKnown RBP13.36□□□□□ -0.27
DCLK1-201ENST00000255448 MNS1Q8NEH6 495 aa13.36□□□□□ -0.27
DCLK1-201ENST00000255448 ATP6V1DQ9Y5K8 247 aa13.36□□□□□ -0.27
DCLK1-201ENST00000255448 GORABQ5T7V8 394 aa13.35□□□□□ -0.27
DCLK1-201ENST00000255448 CHMP3Q9Y3E7 222 aa13.35□□□□□ -0.27
DCLK1-201ENST00000255448 NUCB2P80303 420 aa13.35□□□□□ -0.27
DCLK1-201ENST00000255448 TAF7LQ5H9L4 462 aa13.35□□□□□ -0.27
DCLK1-201ENST00000255448 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
DCLK1-201ENST00000255448 BCL2L13Q9BXK5 485 aa13.34□□□□□ -0.27
DCLK1-201ENST00000255448 CBX1P83916 185 aa13.34□□□□□ -0.27
DCLK1-201ENST00000255448 ANKRD45Q5TZF3 282 aa13.34□□□□□ -0.27
DCLK1-201ENST00000255448 PANK3Q9H999 370 aa13.34□□□□□ -0.27
DCLK1-201ENST00000255448 NUTM2FA1L443 756 aa13.33□□□□□ -0.27
DCLK1-201ENST00000255448 ERICH4A6NGS2 130 aa13.33□□□□□ -0.28
DCLK1-201ENST00000255448 FGD6Q6ZV73 1430 aa13.33□□□□□ -0.28
DCLK1-201ENST00000255448 H0YHG0 523 aa13.33□□□□□ -0.28
DCLK1-201ENST00000255448 LTV1Q96GA3 475 aaPredicted RBP13.33□□□□□ -0.28
DCLK1-201ENST00000255448 ISY1Q9ULR0 285 aaKnown RBP13.33□□□□□ -0.28
DCLK1-201ENST00000255448 USP47Q96K76 1375 aa13.33□□□□□ -0.28
DCLK1-201ENST00000255448 CFTRP13569 1480 aa13.33□□□□□ -0.28
DCLK1-201ENST00000255448 HSP90B2PQ58FF3 399 aa13.32□□□□□ -0.28
DCLK1-201ENST00000255448 CGNQ9P2M7 1197 aaKnown RBP13.32□□□□□ -0.28
DCLK1-201ENST00000255448 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
DCLK1-201ENST00000255448 RDXP35241 583 aaKnown RBP13.32□□□□□ -0.28
DCLK1-201ENST00000255448 TPD52L1Q16890 204 aaPredicted RBP13.32□□□□□ -0.28
DCLK1-201ENST00000255448 MPNDQ8N594 471 aa13.32□□□□□ -0.28
DCLK1-201ENST00000255448 SF3A1Q15459 793 aaKnown RBP13.31□□□□□ -0.28
DCLK1-201ENST00000255448 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
DCLK1-201ENST00000255448 SLC4A10Q6U841 1118 aa13.3□□□□□ -0.28
DCLK1-201ENST00000255448 ZSCAN30Q86W11 494 aa13.3□□□□□ -0.28
DCLK1-201ENST00000255448 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
DCLK1-201ENST00000255448 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
DCLK1-201ENST00000255448 CASKIN1Q8WXD9 1431 aa13.29□□□□□ -0.28
DCLK1-201ENST00000255448 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
DCLK1-201ENST00000255448 MINK1Q8N4C8 1332 aaPredicted RBP13.29□□□□□ -0.28
DCLK1-201ENST00000255448 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
DCLK1-201ENST00000255448 LEKR1Q6ZMV7 388 aa13.29□□□□□ -0.28
DCLK1-201ENST00000255448 PDCL2Q8N4E4 241 aa13.29□□□□□ -0.28
DCLK1-201ENST00000255448 SYNJ2O15056 1496 aa13.28□□□□□ -0.28
DCLK1-201ENST00000255448 CCDC70Q6NSX1 233 aa13.28□□□□□ -0.28
DCLK1-201ENST00000255448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
DCLK1-201ENST00000255448 ACBD3Q9H3P7 528 aa13.28□□□□□ -0.28
DCLK1-201ENST00000255448 CCDC34Q96HJ3 373 aa13.27□□□□□ -0.28
DCLK1-201ENST00000255448 MCM4P33991 863 aa13.27□□□□□ -0.29
DCLK1-201ENST00000255448 KIF3AQ9Y496 699 aa13.27□□□□□ -0.29
DCLK1-201ENST00000255448 E9PSI1 815 aa13.26□□□□□ -0.29
DCLK1-201ENST00000255448 H3BQV1 296 aa13.26□□□□□ -0.29
DCLK1-201ENST00000255448 PRPF40AO75400 957 aaKnown RBP13.26□□□□□ -0.29
DCLK1-201ENST00000255448 SKIDA1Q1XH10 827 aa13.26□□□□□ -0.29
DCLK1-201ENST00000255448 IFFO2Q5TF58 517 aa13.26□□□□□ -0.29
DCLK1-201ENST00000255448 DEF6Q9H4E7 631 aa13.26□□□□□ -0.29
DCLK1-201ENST00000255448 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
DCLK1-201ENST00000255448 ANKRD50Q9ULJ7 1429 aa13.26□□□□□ -0.29
DCLK1-201ENST00000255448 GTF2E1P29083 439 aaPredicted RBP13.26□□□□□ -0.29
DCLK1-201ENST00000255448 EVA1CP58658 441 aa13.26□□□□□ -0.29
DCLK1-201ENST00000255448 TEFQ10587 303 aa13.26□□□□□ -0.29
DCLK1-201ENST00000255448 PRG4Q92954 1404 aaPredicted RBP13.26□□□□□ -0.29
DCLK1-201ENST00000255448 TSPY26PQ9H489 355 aa13.26□□□□□ -0.29
DCLK1-201ENST00000255448 LRRC9Q6ZRR7 1453 aa13.25□□□□□ -0.29
DCLK1-201ENST00000255448 HMGXB3Q12766 1538 aa13.25□□□□□ -0.29
DCLK1-201ENST00000255448 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
DCLK1-201ENST00000255448 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
DCLK1-201ENST00000255448 TRERF1Q96PN7 1200 aa13.25□□□□□ -0.29
DCLK1-201ENST00000255448 ZKSCAN2Q63HK3 967 aa13.25□□□□□ -0.29
DCLK1-201ENST00000255448 SASS6Q6UVJ0 657 aa13.24□□□□□ -0.29
DCLK1-201ENST00000255448 RILPL2Q969X0 211 aa13.24□□□□□ -0.29
DCLK1-201ENST00000255448 AK7Q96M32 723 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms