RNA–Protein interactions for RNA: ENST00000253408.10

GFAP-201, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 3,135 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-201ENST00000253408 NUP160Q12769 1436 aa17.93■□□□□ 0.46
GFAP-201ENST00000253408 CDCA8Q53HL2 280 aa17.93■□□□□ 0.46
GFAP-201ENST00000253408 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
GFAP-201ENST00000253408 COG6Q9Y2V7 657 aa17.92■□□□□ 0.46
GFAP-201ENST00000253408 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
GFAP-201ENST00000253408 PANK1Q8TE04 598 aa17.91■□□□□ 0.46
GFAP-201ENST00000253408 SLKQ9H2G2 1235 aaPredicted RBP17.91■□□□□ 0.46
GFAP-201ENST00000253408 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
GFAP-201ENST00000253408 BCL2L13Q9BXK5 485 aa17.9■□□□□ 0.46
GFAP-201ENST00000253408 PRDM15P57071 1507 aaPredicted RBP17.89■□□□□ 0.46
GFAP-201ENST00000253408 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
GFAP-201ENST00000253408 IGHDP01880 384 aa17.89■□□□□ 0.45
GFAP-201ENST00000253408 AFAP1Q8N556 730 aa17.89■□□□□ 0.45
GFAP-201ENST00000253408 EIF5BO60841 1220 aaKnown RBP17.88■□□□□ 0.45
GFAP-201ENST00000253408 CFAP70Q5T0N1 1121 aa17.87■□□□□ 0.45
GFAP-201ENST00000253408 CDC42BPBQ9Y5S2 1711 aa17.87■□□□□ 0.45
GFAP-201ENST00000253408 CLUAP1Q96AJ1 413 aa17.86■□□□□ 0.45
GFAP-201ENST00000253408 SPRYD3Q8NCJ5 442 aa17.86■□□□□ 0.45
GFAP-201ENST00000253408 EFCAB2Q5VUJ9 269 aa17.85■□□□□ 0.45
GFAP-201ENST00000253408 WDR7Q9Y4E6 1490 aa17.85■□□□□ 0.45
GFAP-201ENST00000253408 CENPJQ9HC77 1338 aaPredicted RBP17.85■□□□□ 0.45
GFAP-201ENST00000253408 E9PSI1 815 aa17.84■□□□□ 0.45
GFAP-201ENST00000253408 SPAG9O60271 1321 aaKnown RBP17.84■□□□□ 0.45
GFAP-201ENST00000253408 ZNF521Q96K83 1311 aa17.84■□□□□ 0.45
GFAP-201ENST00000253408 MYO5CQ9NQX4 1742 aa17.83■□□□□ 0.45
GFAP-201ENST00000253408 SEC24BO95487 1268 aa17.83■□□□□ 0.44
GFAP-201ENST00000253408 TTC37Q6PGP7 1564 aa17.83■□□□□ 0.44
GFAP-201ENST00000253408 KIF3BO15066 747 aa17.82■□□□□ 0.44
GFAP-201ENST00000253408 EIF2AK4Q9P2K8 1649 aaKnown RBP17.81■□□□□ 0.44
GFAP-201ENST00000253408 PREX2Q70Z35 1606 aa17.81■□□□□ 0.44
GFAP-201ENST00000253408 MORC1Q86VD1 984 aa17.8■□□□□ 0.44
GFAP-201ENST00000253408 TNNQ9UQP3 1299 aa17.8■□□□□ 0.44
GFAP-201ENST00000253408 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
GFAP-201ENST00000253408 ASXL1Q8IXJ9 1541 aa17.79■□□□□ 0.44
GFAP-201ENST00000253408 TRAK1Q9UPV9 953 aa17.78■□□□□ 0.44
GFAP-201ENST00000253408 INSRP06213 1382 aa17.78■□□□□ 0.44
GFAP-201ENST00000253408 CARD14Q9BXL6 1004 aa17.78■□□□□ 0.44
GFAP-201ENST00000253408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.78■□□□□ 0.44
GFAP-201ENST00000253408 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.44
GFAP-201ENST00000253408 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.44
GFAP-201ENST00000253408 BECN1Q14457 450 aa17.77■□□□□ 0.43
GFAP-201ENST00000253408 WWC1Q8IX03 1113 aa17.76■□□□□ 0.43
GFAP-201ENST00000253408 TRAPPC8Q9Y2L5 1435 aa17.76■□□□□ 0.43
GFAP-201ENST00000253408 CGNL1Q0VF96 1302 aa17.76■□□□□ 0.43
GFAP-201ENST00000253408 UPF2Q9HAU5 1272 aaKnown RBP17.76■□□□□ 0.43
GFAP-201ENST00000253408 UNC13BO14795 1591 aa17.76■□□□□ 0.43
GFAP-201ENST00000253408 POGKQ9P215 609 aa17.76■□□□□ 0.43
GFAP-201ENST00000253408 DUOX2Q9NRD8 1548 aa17.76■□□□□ 0.43
GFAP-201ENST00000253408 ADGRF5Q8IZF2 1346 aa17.75■□□□□ 0.43
GFAP-201ENST00000253408 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
GFAP-201ENST00000253408 IQGAP3Q86VI3 1631 aa17.74■□□□□ 0.43
GFAP-201ENST00000253408 PRKCSHP14314 528 aaPredicted RBP17.74■□□□□ 0.43
GFAP-201ENST00000253408 NUTM2DQ5VT03 806 aaPredicted RBP17.74■□□□□ 0.43
GFAP-201ENST00000253408 SLC12A5Q9H2X9 1139 aa17.74■□□□□ 0.43
GFAP-201ENST00000253408 TRMT2AQ8IZ69 625 aaKnown RBP17.73■□□□□ 0.43
GFAP-201ENST00000253408 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
GFAP-201ENST00000253408 PIK3C2GO75747 1445 aa17.73■□□□□ 0.43
GFAP-201ENST00000253408 SAFB2Q14151 953 aaKnown RBP eCLIP17.72■□□□□ 0.43
GFAP-201ENST00000253408 TMEM132EQ6IEE7 984 aa17.71■□□□□ 0.43
GFAP-201ENST00000253408 RLBP1P12271 317 aa17.71■□□□□ 0.43
GFAP-201ENST00000253408 GZF1Q9H116 711 aaPredicted RBP17.71■□□□□ 0.43
GFAP-201ENST00000253408 MAPK8IP3Q9UPT6 1336 aa17.71■□□□□ 0.43
GFAP-201ENST00000253408 LAMC1P11047 1609 aa17.71■□□□□ 0.42
GFAP-201ENST00000253408 KANK1Q14678 1352 aa17.71■□□□□ 0.42
GFAP-201ENST00000253408 PDE3AQ14432 1141 aa17.7■□□□□ 0.42
GFAP-201ENST00000253408 PCDHB15Q9Y5E8 787 aa17.7■□□□□ 0.42
GFAP-201ENST00000253408 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
GFAP-201ENST00000253408 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
GFAP-201ENST00000253408 U2AF1L5P0DN76 240 aaPredicted RBP17.69■□□□□ 0.42
GFAP-201ENST00000253408 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.42
GFAP-201ENST00000253408 USP19O94966 1318 aa17.68■□□□□ 0.42
GFAP-201ENST00000253408 MTHFSP49914 203 aa17.68■□□□□ 0.42
GFAP-201ENST00000253408 RARSP54136 660 aaKnown RBP17.68■□□□□ 0.42
GFAP-201ENST00000253408 ATP10AO60312 1499 aa17.67■□□□□ 0.42
GFAP-201ENST00000253408 MADDQ8WXG6 1647 aa17.67■□□□□ 0.42
GFAP-201ENST00000253408 U2SURPO15042 1029 aaKnown RBP17.67■□□□□ 0.42
GFAP-201ENST00000253408 MFAP1P55081 439 aaKnown RBP17.67■□□□□ 0.42
GFAP-201ENST00000253408 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
GFAP-201ENST00000253408 RUNDC1Q96C34 613 aa17.67■□□□□ 0.42
GFAP-201ENST00000253408 SYNMO15061 1565 aa17.66■□□□□ 0.42
GFAP-201ENST00000253408 NSD3Q9BZ95 1437 aa17.66■□□□□ 0.42
GFAP-201ENST00000253408 ERCC6L2Q5T890 1561 aa17.65■□□□□ 0.42
GFAP-201ENST00000253408 PLCH2O75038 1416 aa17.65■□□□□ 0.42
GFAP-201ENST00000253408 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
GFAP-201ENST00000253408 CFAP53Q96M91 514 aa17.65■□□□□ 0.42
GFAP-201ENST00000253408 UGGT1Q9NYU2 1555 aa17.64■□□□□ 0.42
GFAP-201ENST00000253408 PLXNC1O60486 1568 aa17.64■□□□□ 0.41
GFAP-201ENST00000253408 RNF17Q9BXT8 1623 aaKnown RBP17.64■□□□□ 0.41
GFAP-201ENST00000253408 RWDD1Q9H446 243 aaPredicted RBP17.64■□□□□ 0.41
GFAP-201ENST00000253408 GGT6Q6P531 493 aa17.63■□□□□ 0.41
GFAP-201ENST00000253408 SCAPERQ9BY12 1400 aa17.62■□□□□ 0.41
GFAP-201ENST00000253408 ITPRIPQ8IWB1 547 aa17.61■□□□□ 0.41
GFAP-201ENST00000253408 IQGAP1P46940 1657 aa17.61■□□□□ 0.41
GFAP-201ENST00000253408 CLTCL1P53675 1640 aa17.61■□□□□ 0.41
GFAP-201ENST00000253408 TBC1D2Q9BYX2 928 aa17.61■□□□□ 0.41
GFAP-201ENST00000253408 SMC4Q9NTJ3 1288 aa17.61■□□□□ 0.41
GFAP-201ENST00000253408 ERVK-7P63135 1459 aa17.61■□□□□ 0.41
GFAP-201ENST00000253408 ABCC2Q92887 1545 aa17.6■□□□□ 0.41
GFAP-201ENST00000253408 KDM5AP29375 1690 aaKnown RBP17.6■□□□□ 0.41
GFAP-201ENST00000253408 NPC1L1Q9UHC9 1359 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms