RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 VPS8Q8N3P4 1428 aa17.68■□□□□ 0.42
ZC3H4-201ENST00000253048 CENPJQ9HC77 1338 aaPredicted RBP17.68■□□□□ 0.42
ZC3H4-201ENST00000253048 ABTB2Q8N961 1025 aa17.68■□□□□ 0.42
ZC3H4-201ENST00000253048 PAXIP1Q6ZW49 1069 aaPredicted RBP17.67■□□□□ 0.42
ZC3H4-201ENST00000253048 RILPL2Q969X0 211 aa17.67■□□□□ 0.42
ZC3H4-201ENST00000253048 H3BQV1 296 aa17.67■□□□□ 0.42
ZC3H4-201ENST00000253048 IFFO2Q5TF58 517 aa17.67■□□□□ 0.42
ZC3H4-201ENST00000253048 CPLX2Q6PUV4 134 aaKnown RBP17.67■□□□□ 0.42
ZC3H4-201ENST00000253048 CLUAP1Q96AJ1 413 aa17.67■□□□□ 0.42
ZC3H4-201ENST00000253048 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
ZC3H4-201ENST00000253048 TRIM29Q14134 588 aa17.66■□□□□ 0.42
ZC3H4-201ENST00000253048 TOM1L2Q6ZVM7 507 aa17.66■□□□□ 0.42
ZC3H4-201ENST00000253048 DIAPH1O60610 1272 aaKnown RBP17.66■□□□□ 0.42
ZC3H4-201ENST00000253048 FAM184AQ8NB25 1140 aa17.65■□□□□ 0.42
ZC3H4-201ENST00000253048 IFIT2P09913 472 aaKnown RBP17.65■□□□□ 0.42
ZC3H4-201ENST00000253048 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.42
ZC3H4-201ENST00000253048 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
ZC3H4-201ENST00000253048 TRDNQ13061 729 aa17.64■□□□□ 0.42
ZC3H4-201ENST00000253048 CCDC47Q96A33 483 aaKnown RBP17.64■□□□□ 0.41
ZC3H4-201ENST00000253048 SYAP1Q96A49 352 aaPredicted RBP17.64■□□□□ 0.41
ZC3H4-201ENST00000253048 TMEM132AQ24JP5 1023 aa17.64■□□□□ 0.41
ZC3H4-201ENST00000253048 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
ZC3H4-201ENST00000253048 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
ZC3H4-201ENST00000253048 PLIN1O60240 522 aa17.63■□□□□ 0.41
ZC3H4-201ENST00000253048 DIAPH3Q9NSV4 1193 aa17.63■□□□□ 0.41
ZC3H4-201ENST00000253048 NFXL1Q6ZNB6 911 aa17.63■□□□□ 0.41
ZC3H4-201ENST00000253048 WDHD1O75717 1129 aaPredicted RBP17.63■□□□□ 0.41
ZC3H4-201ENST00000253048 SLC4A3P48751 1232 aa17.63■□□□□ 0.41
ZC3H4-201ENST00000253048 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
ZC3H4-201ENST00000253048 MIA2Q96PC5 1412 aa17.62■□□□□ 0.41
ZC3H4-201ENST00000253048 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
ZC3H4-201ENST00000253048 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
ZC3H4-201ENST00000253048 PTMSP20962 102 aa17.62■□□□□ 0.41
ZC3H4-201ENST00000253048 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
ZC3H4-201ENST00000253048 WIZO95785 1651 aa17.62■□□□□ 0.41
ZC3H4-201ENST00000253048 GBP4Q96PP9 640 aa17.61■□□□□ 0.41
ZC3H4-201ENST00000253048 TPM3P06753 285 aa17.61■□□□□ 0.41
ZC3H4-201ENST00000253048 MFAP1P55081 439 aaKnown RBP17.61■□□□□ 0.41
ZC3H4-201ENST00000253048 TSPYL4Q9UJ04 414 aa17.61■□□□□ 0.41
ZC3H4-201ENST00000253048 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
ZC3H4-201ENST00000253048 DDX54Q8TDD1 881 aaKnown RBP17.59■□□□□ 0.41
ZC3H4-201ENST00000253048 PANK3Q9H999 370 aa17.59■□□□□ 0.41
ZC3H4-201ENST00000253048 L3MBTL2Q969R5 705 aa17.59■□□□□ 0.41
ZC3H4-201ENST00000253048 TSR1Q2NL82 804 aaKnown RBP17.59■□□□□ 0.41
ZC3H4-201ENST00000253048 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
ZC3H4-201ENST00000253048 RBM5P52756 815 aaKnown RBP eCLIP17.59■□□□□ 0.41
ZC3H4-201ENST00000253048 FKBP5Q13451 457 aaPredicted RBP17.59■□□□□ 0.41
ZC3H4-201ENST00000253048 RUFY2Q8WXA3 655 aa17.58■□□□□ 0.41
ZC3H4-201ENST00000253048 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.41
ZC3H4-201ENST00000253048 PHLDB1Q86UU1 1377 aa17.57■□□□□ 0.4
ZC3H4-201ENST00000253048 RAB3GAP2Q9H2M9 1393 aa17.57■□□□□ 0.4
ZC3H4-201ENST00000253048 NEUROD6Q96NK8 337 aa17.57■□□□□ 0.4
ZC3H4-201ENST00000253048 PRDM2Q13029 1718 aa17.57■□□□□ 0.4
ZC3H4-201ENST00000253048 MSNP26038 577 aaKnown RBP17.56■□□□□ 0.4
ZC3H4-201ENST00000253048 CPLX1O14810 134 aa17.56■□□□□ 0.4
ZC3H4-201ENST00000253048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.56■□□□□ 0.43e-19■■■■■ 242.2
ZC3H4-201ENST00000253048 ARHGAP5Q13017 1502 aa17.56■□□□□ 0.4
ZC3H4-201ENST00000253048 TCERG1O14776 1098 aaKnown RBP17.56■□□□□ 0.4
ZC3H4-201ENST00000253048 PRDM11Q9NQV5 511 aa17.56■□□□□ 0.4
ZC3H4-201ENST00000253048 NLRP13Q86W25 1043 aa17.55■□□□□ 0.4
ZC3H4-201ENST00000253048 MTMR7Q9Y216 660 aa17.55■□□□□ 0.4
ZC3H4-201ENST00000253048 ST18O60284 1047 aa17.55■□□□□ 0.4
ZC3H4-201ENST00000253048 CABP4P57796 275 aa17.55■□□□□ 0.4
ZC3H4-201ENST00000253048 MCTP1Q6DN14 999 aa17.54■□□□□ 0.4
ZC3H4-201ENST00000253048 PAF1Q8N7H5 531 aa17.54■□□□□ 0.4
ZC3H4-201ENST00000253048 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.42e-6■■■□□ 18
ZC3H4-201ENST00000253048 WASHC4Q2M389 1173 aa17.53■□□□□ 0.4
ZC3H4-201ENST00000253048 PCMTD1Q96MG8 357 aaPredicted RBP17.53■□□□□ 0.4
ZC3H4-201ENST00000253048 GNL3LQ9NVN8 582 aaKnown RBP17.53■□□□□ 0.4
ZC3H4-201ENST00000253048 GOLGA6L1Q8N7Z2 621 aa17.52■□□□□ 0.4
ZC3H4-201ENST00000253048 SPG7Q9UQ90 795 aa17.52■□□□□ 0.39
ZC3H4-201ENST00000253048 KIF15Q9NS87 1388 aa17.52■□□□□ 0.39
ZC3H4-201ENST00000253048 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
ZC3H4-201ENST00000253048 RIPK4P57078 832 aa17.51■□□□□ 0.39
ZC3H4-201ENST00000253048 SLC3A2P08195 630 aaKnown RBP17.51■□□□□ 0.39
ZC3H4-201ENST00000253048 ST20-MTHFSA0A0A6YYL1 179 aa17.51■□□□□ 0.39
ZC3H4-201ENST00000253048 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
ZC3H4-201ENST00000253048 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
ZC3H4-201ENST00000253048 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
ZC3H4-201ENST00000253048 HSP90AB4PQ58FF6 505 aa17.5■□□□□ 0.39
ZC3H4-201ENST00000253048 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
ZC3H4-201ENST00000253048 CABP2Q9NPB3 220 aa17.5■□□□□ 0.39
ZC3H4-201ENST00000253048 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
ZC3H4-201ENST00000253048 ROCK1Q13464 1354 aa17.5■□□□□ 0.39
ZC3H4-201ENST00000253048 TPM1P09493 284 aa17.49■□□□□ 0.39
ZC3H4-201ENST00000253048 TNNT3P45378 269 aaPredicted RBP17.49■□□□□ 0.39
ZC3H4-201ENST00000253048 HMOX1P09601 288 aa17.49■□□□□ 0.39
ZC3H4-201ENST00000253048 NGLY1Q96IV0 654 aa17.48■□□□□ 0.39
ZC3H4-201ENST00000253048 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
ZC3H4-201ENST00000253048 ZKSCAN2Q63HK3 967 aa17.48■□□□□ 0.39
ZC3H4-201ENST00000253048 API5Q9BZZ5 524 aaKnown RBP17.48■□□□□ 0.39
ZC3H4-201ENST00000253048 ATP2B2Q01814 1243 aa17.48■□□□□ 0.39
ZC3H4-201ENST00000253048 ADAMTS2O95450 1211 aa17.47■□□□□ 0.39
ZC3H4-201ENST00000253048 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
ZC3H4-201ENST00000253048 BRMS1Q9HCU9 246 aa17.47■□□□□ 0.39
ZC3H4-201ENST00000253048 TTLL12Q14166 644 aaPredicted RBP17.46■□□□□ 0.39
ZC3H4-201ENST00000253048 RALYLQ86SE5 291 aaKnown RBP17.46■□□□□ 0.39
ZC3H4-201ENST00000253048 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
ZC3H4-201ENST00000253048 RUSC2Q8N2Y8 1516 aa17.46■□□□□ 0.38
ZC3H4-201ENST00000253048 SAFBQ15424 915 aaKnown RBP eCLIP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms