RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MYOM1P52179 1685 aa26.18■■□□□ 1.78
CDC42EP1-201ENST00000249014 MYOM2P54296 1465 aa26.18■■□□□ 1.78
CDC42EP1-201ENST00000249014 NPM1P06748 294 aaKnown RBP eCLIP26.17■■□□□ 1.78
CDC42EP1-201ENST00000249014 BLMP54132 1417 aaPredicted RBP26.17■■□□□ 1.78
CDC42EP1-201ENST00000249014 LMTK2Q8IWU2 1503 aa26.17■■□□□ 1.78
CDC42EP1-201ENST00000249014 ZMYM4Q5VZL5 1548 aa26.15■■□□□ 1.78
CDC42EP1-201ENST00000249014 CD109Q6YHK3 1445 aa26.15■■□□□ 1.78
CDC42EP1-201ENST00000249014 ADGRF5Q8IZF2 1346 aa26.15■■□□□ 1.78
CDC42EP1-201ENST00000249014 INSRP06213 1382 aa26.15■■□□□ 1.78
CDC42EP1-201ENST00000249014 CFAP70Q5T0N1 1121 aa26.14■■□□□ 1.78
CDC42EP1-201ENST00000249014 CFAP74Q9C0B2 1584 aa26.14■■□□□ 1.78
CDC42EP1-201ENST00000249014 EIF3AQ14152 1382 aaKnown RBP26.14■■□□□ 1.78
CDC42EP1-201ENST00000249014 CDCA8Q53HL2 280 aa26.14■■□□□ 1.77
CDC42EP1-201ENST00000249014 POGZQ7Z3K3 1410 aa26.14■■□□□ 1.77
CDC42EP1-201ENST00000249014 KNSTRNQ9Y448 316 aa26.13■■□□□ 1.77
CDC42EP1-201ENST00000249014 FRMPD1Q5SYB0 1578 aa26.13■■□□□ 1.77
CDC42EP1-201ENST00000249014 AMER1Q5JTC6 1135 aaPredicted RBP26.13■■□□□ 1.77
CDC42EP1-201ENST00000249014 PDE3BQ13370 1112 aa26.12■■□□□ 1.77
CDC42EP1-201ENST00000249014 ANP32EQ9BTT0 268 aa26.12■■□□□ 1.77
CDC42EP1-201ENST00000249014 KDM5AP29375 1690 aaKnown RBP26.11■■□□□ 1.77
CDC42EP1-201ENST00000249014 CDCA7LQ96GN5 454 aa26.09■■□□□ 1.77
CDC42EP1-201ENST00000249014 CFAP65Q6ZU64 1925 aaKnown RBP26.09■■□□□ 1.77
CDC42EP1-201ENST00000249014 MLH3Q9UHC1 1453 aa26.09■■□□□ 1.77
CDC42EP1-201ENST00000249014 HECW2Q9P2P5 1572 aa26.09■■□□□ 1.77
CDC42EP1-201ENST00000249014 NRXN1Q9ULB1 1477 aa26.08■■□□□ 1.77
CDC42EP1-201ENST00000249014 PPP2R1AP30153 589 aa26.08■■□□□ 1.77
CDC42EP1-201ENST00000249014 CCDC136Q96JN2 1154 aa26.08■■□□□ 1.77
CDC42EP1-201ENST00000249014 RCAN3Q9UKA8 241 aa26.08■■□□□ 1.77
CDC42EP1-201ENST00000249014 ASXL1Q8IXJ9 1541 aa26.08■■□□□ 1.77
CDC42EP1-201ENST00000249014 RRP1P56182 461 aaKnown RBP26.07■■□□□ 1.76
CDC42EP1-201ENST00000249014 ADGRB3O60242 1522 aa26.07■■□□□ 1.76
CDC42EP1-201ENST00000249014 FANCIQ9NVI1 1328 aa26.06■■□□□ 1.76
CDC42EP1-201ENST00000249014 NPATQ14207 1427 aa26.06■■□□□ 1.76
CDC42EP1-201ENST00000249014 ERVK-7P63135 1459 aa26.06■■□□□ 1.76
CDC42EP1-201ENST00000249014 ADAMTS8Q9UP79 889 aa26.05■■□□□ 1.76
CDC42EP1-201ENST00000249014 MSH5O43196 834 aa26.03■■□□□ 1.76
CDC42EP1-201ENST00000249014 NOS1P29475 1434 aa26.03■■□□□ 1.76
CDC42EP1-201ENST00000249014 GGT6Q6P531 493 aa26.03■■□□□ 1.76
CDC42EP1-201ENST00000249014 MYO3AQ8NEV4 1616 aa26.01■■□□□ 1.76
CDC42EP1-201ENST00000249014 PPLO60437 1756 aa26.01■■□□□ 1.75
CDC42EP1-201ENST00000249014 NPC1L1Q9UHC9 1359 aa26■■□□□ 1.75
CDC42EP1-201ENST00000249014 CHGAP10645 457 aaKnown RBP25.99■■□□□ 1.75
CDC42EP1-201ENST00000249014 ABCC3O15438 1527 aa25.98■■□□□ 1.75
CDC42EP1-201ENST00000249014 PIK3C2GO75747 1445 aa25.97■■□□□ 1.75
CDC42EP1-201ENST00000249014 SETBP1Q9Y6X0 1596 aa25.97■■□□□ 1.75
CDC42EP1-201ENST00000249014 EXOC6Q8TAG9 804 aa25.96■■□□□ 1.75
CDC42EP1-201ENST00000249014 SLC24A1O60721 1099 aa25.95■■□□□ 1.74
CDC42EP1-201ENST00000249014 RAPGEF3O95398 923 aa25.95■■□□□ 1.74
CDC42EP1-201ENST00000249014 SIGLEC1Q9BZZ2 1709 aa25.95■■□□□ 1.74
CDC42EP1-201ENST00000249014 CAMSAP1Q5T5Y3 1602 aa25.94■■□□□ 1.74
CDC42EP1-201ENST00000249014 WDR43Q15061 677 aaKnown RBP eCLIP25.94■■□□□ 1.74
CDC42EP1-201ENST00000249014 NEO1Q92859 1461 aa25.94■■□□□ 1.74
CDC42EP1-201ENST00000249014 SBNO2Q9Y2G9 1366 aa25.93■■□□□ 1.74
CDC42EP1-201ENST00000249014 CARD14Q9BXL6 1004 aa25.93■■□□□ 1.74
CDC42EP1-201ENST00000249014 PLEKHH1Q9ULM0 1364 aa25.92■■□□□ 1.74
CDC42EP1-201ENST00000249014 ZC3H13Q5T200 1668 aaKnown RBP25.91■■□□□ 1.74
CDC42EP1-201ENST00000249014 ADGRB1O14514 1584 aa25.9■■□□□ 1.74
CDC42EP1-201ENST00000249014 DIP2CQ9Y2E4 1556 aa25.9■■□□□ 1.74
CDC42EP1-201ENST00000249014 C14orf93Q9H972 538 aaKnown RBP25.89■■□□□ 1.74
CDC42EP1-201ENST00000249014 CENPJQ9HC77 1338 aaPredicted RBP25.89■■□□□ 1.74
CDC42EP1-201ENST00000249014 QRICH2Q9H0J4 1663 aa25.88■■□□□ 1.73
CDC42EP1-201ENST00000249014 TRAK1Q9UPV9 953 aa25.88■■□□□ 1.73
CDC42EP1-201ENST00000249014 RICTORQ6R327 1708 aa25.87■■□□□ 1.73
CDC42EP1-201ENST00000249014 PLIN1O60240 522 aa25.86■■□□□ 1.73
CDC42EP1-201ENST00000249014 PIK3C2BO00750 1634 aa25.86■■□□□ 1.73
CDC42EP1-201ENST00000249014 ZNF521Q96K83 1311 aa25.86■■□□□ 1.73
CDC42EP1-201ENST00000249014 TMEM132EQ6IEE7 984 aa25.85■■□□□ 1.73
CDC42EP1-201ENST00000249014 RPGRIP1LQ68CZ1 1315 aa25.84■■□□□ 1.73
CDC42EP1-201ENST00000249014 DUSP27Q5VZP5 1158 aa25.81■■□□□ 1.72
CDC42EP1-201ENST00000249014 CCDC146Q8IYE0 955 aa25.8■■□□□ 1.72
CDC42EP1-201ENST00000249014 NEXMIFQ5QGS0 1516 aa25.79■■□□□ 1.72
CDC42EP1-201ENST00000249014 GLI2P10070 1586 aa25.78■■□□□ 1.72
CDC42EP1-201ENST00000249014 NUTM2DQ5VT03 806 aaPredicted RBP25.78■■□□□ 1.72
CDC42EP1-201ENST00000249014 YEATS2Q9ULM3 1422 aa25.77■■□□□ 1.72
CDC42EP1-201ENST00000249014 GOLGA2Q08379 1002 aa25.77■■□□□ 1.72
CDC42EP1-201ENST00000249014 ARHGAP31Q2M1Z3 1444 aa25.76■■□□□ 1.71
CDC42EP1-201ENST00000249014 NSD3Q9BZ95 1437 aa25.76■■□□□ 1.71
CDC42EP1-201ENST00000249014 CRBNQ96SW2 442 aa25.76■■□□□ 1.71
CDC42EP1-201ENST00000249014 SLC12A5Q9H2X9 1139 aa25.76■■□□□ 1.71
CDC42EP1-201ENST00000249014 ARHGEF28Q8N1W1 1705 aaKnown RBP25.75■■□□□ 1.71
CDC42EP1-201ENST00000249014 APAF1O14727 1248 aa25.73■■□□□ 1.71
CDC42EP1-201ENST00000249014 C20orf194Q5TEA3 1177 aa25.73■■□□□ 1.71
CDC42EP1-201ENST00000249014 SLFN5Q08AF3 891 aa25.72■■□□□ 1.71
CDC42EP1-201ENST00000249014 VGFO15240 615 aaPredicted RBP25.72■■□□□ 1.71
CDC42EP1-201ENST00000249014 IDI1Q13907 227 aa25.72■■□□□ 1.71
CDC42EP1-201ENST00000249014 MYO5BQ9ULV0 1848 aa25.71■■□□□ 1.71
CDC42EP1-201ENST00000249014 POLR3AO14802 1390 aaPredicted RBP25.71■■□□□ 1.71
CDC42EP1-201ENST00000249014 TRMT2AQ8IZ69 625 aaKnown RBP25.7■■□□□ 1.7
CDC42EP1-201ENST00000249014 SPINK5Q9NQ38 1064 aaPredicted RBP25.69■■□□□ 1.7
CDC42EP1-201ENST00000249014 TULP4Q9NRJ4 1543 aa25.69■■□□□ 1.7
CDC42EP1-201ENST00000249014 SHPRHQ149N8 1683 aa25.68■■□□□ 1.7
CDC42EP1-201ENST00000249014 USP32Q8NFA0 1604 aa25.68■■□□□ 1.7
CDC42EP1-201ENST00000249014 PREX1Q8TCU6 1659 aa25.67■■□□□ 1.7
CDC42EP1-201ENST00000249014 ERICH6Q7L0X2 663 aa25.66■■□□□ 1.7
CDC42EP1-201ENST00000249014 MORC1Q86VD1 984 aa25.66■■□□□ 1.7
CDC42EP1-201ENST00000249014 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
CDC42EP1-201ENST00000249014 TCERG1O14776 1098 aaKnown RBP25.64■■□□□ 1.7
CDC42EP1-201ENST00000249014 TNNT2P45379 298 aaPredicted RBP25.64■■□□□ 1.7
CDC42EP1-201ENST00000249014 TMEM131LA2VDJ0 1609 aa25.64■■□□□ 1.69
CDC42EP1-201ENST00000249014 SLC52A1Q9NWF4 448 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 277.5 ms